data_7BSU # _model_server_result.job_id NpwWxOPqP3IYfR8U-7Vs-g _model_server_result.datetime_utc '2025-03-04 13:30:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7bsu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":403}' # _entry.id 7BSU # _exptl.entry_id 7BSU _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 164.156 _entity.id 6 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 1-deoxy-alpha-D-mannopyranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7BSU _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7BSU _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 91 C CYS 91 1_555 B SG CYS 104 C CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 B SG CYS 94 C CYS 94 1_555 B SG CYS 102 C CYS 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf3 B SG CYS 157 C CYS 157 1_555 B SG CYS 171 C CYS 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? covale ? covale1 A C THR 401 A THR 408 1_555 A N BFD 402 A BFD 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.351 ? covale ? covale2 A C BFD 402 A BFD 409 1_555 A N LYS 403 A LYS 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? covale ? covale3 B ND2 ASN 294 C ASN 294 1_555 H C1 NAG . C NAG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.451 ? metalc ? metalc1 A O THR 404 A THR 411 1_555 C MG MG . A MG 1100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? metalc ? metalc2 A OD1 ASP 809 A ASP 816 1_555 C MG MG . A MG 1100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.487 ? # _chem_comp.formula 'C6 H12 O5' _chem_comp.formula_weight 164.156 _chem_comp.id AH2 _chem_comp.mon_nstd_flag . _chem_comp.name 1-deoxy-alpha-D-mannopyranose _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms 1,5-Anhydromannitol;1-deoxy-alpha-D-mannose;1-deoxy-D-mannose;1-deoxy-mannose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O5 AH2 sing 1 n n C1 C2 AH2 sing 2 n n O5 C5 AH2 sing 3 n n C2 C3 AH2 sing 4 n n C2 O2 AH2 sing 5 n n C5 C6 AH2 sing 6 n n C5 C4 AH2 sing 7 n n C3 C4 AH2 sing 8 n n C3 O3 AH2 sing 9 n n C6 O6 AH2 sing 10 n n C4 O4 AH2 sing 11 n n O3 HO3 AH2 sing 12 n n C4 H4 AH2 sing 13 n n C5 H5 AH2 sing 14 n n O4 HO4 AH2 sing 15 n n C6 H61 AH2 sing 16 n n C6 H62 AH2 sing 17 n n O6 HO6 AH2 sing 18 n n C3 H3 AH2 sing 19 n n C2 H2 AH2 sing 20 n n O2 HO2 AH2 sing 21 n n C1 H1 AH2 sing 22 n n C1 H11 AH2 sing 23 n n # _atom_sites.entry_id 7BSU _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MG A 1 1100 1100 MG MG . D 4 P5S A 1 1101 1101 P5S P5S . E 5 NAG C 1 401 401 NAG NAG . F 5 NAG C 1 402 402 NAG NAG . G 6 AH2 C 1 403 403 AH2 MAN . H 5 NAG C 1 404 404 NAG NAG . I 5 NAG C 1 405 405 NAG NAG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O3 AH2 . . . G 6 107.663 119.758 43.771 1 72.28 ? O3 AH2 403 C 1 HETATM 2 C C4 AH2 . . . G 6 109.932 120.427 44.277 1 72.28 ? C4 AH2 403 C 1 HETATM 3 C C5 AH2 . . . G 6 110.482 120.128 45.663 1 72.28 ? C5 AH2 403 C 1 HETATM 4 O O4 AH2 . . . G 6 111.012 120.563 43.348 1 72.28 ? O4 AH2 403 C 1 HETATM 5 C C6 AH2 . . . G 6 111.289 121.303 46.199 1 72.28 ? C6 AH2 403 C 1 HETATM 6 O O5 AH2 . . . G 6 109.385 119.857 46.529 1 72.28 ? O5 AH2 403 C 1 HETATM 7 O O6 AH2 . . . G 6 112.373 121.578 45.306 1 72.28 ? O6 AH2 403 C 1 HETATM 8 C C3 AH2 . . . G 6 109.015 119.294 43.841 1 72.28 ? C3 AH2 403 C 1 HETATM 9 C C2 AH2 . . . G 6 109.117 118.143 44.834 1 72.28 ? C2 AH2 403 C 1 HETATM 10 O O2 AH2 . . . G 6 108.223 117.094 44.445 1 72.28 ? O2 AH2 403 C 1 HETATM 11 C C1 AH2 . . . G 6 108.787 118.591 46.255 1 72.28 ? C1 AH2 403 C 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 11 #