data_7BTI
#
_model_server_result.job_id            NvmTAf7YkznPYnQqGWMw1w 
_model_server_result.datetime_utc      '2025-07-14 09:04:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7bti 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":402}' 
#
_entry.id    7BTI 
#
_exptl.entry_id    7BTI 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              427.201 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-DIPHOSPHATE" 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7BTI 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7BTI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    octameric 
_pdbx_struct_assembly.oligomeric_count      8 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 J N N 
? 4 L N N 
? 4 N N N 
? 4 P N N 
? 4 R N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 F C HYP 1 X HYP 1 1_555 F N ALA 2 X ALA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale2 F N HYP 1 X HYP 1 1_555 F C CYS 7 X CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.468 ? 
covale ? covale3 F C TRP 3 X TRP 3 1_555 F N G5G 4 X G5G 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale4 F C G5G 4 X G5G 4 1_555 F N ALA 5 X ALA 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale5 F C ALA 5 X ALA 5 1_555 F N ALO 6 X ALO 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale6 F C ALO 6 X ALO 6 1_555 F N CYS 7 X CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? 
covale ? covale7 G C HYP 1 Y HYP 1 1_555 G N ALA 2 Y ALA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale8 G N HYP 1 Y HYP 1 1_555 G C CYS 7 Y CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? 
covale ? covale9 G C TRP 3 Y TRP 3 1_555 G N G5G 4 Y G5G 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale10 G C G5G 4 Y G5G 4 1_555 G N ALA 5 Y ALA 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale11 G C ALA 5 Y ALA 5 1_555 G N ALO 6 Y ALO 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale12 G C ALO 6 Y ALO 6 1_555 G N CYS 7 Y CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale13 H C HYP 1 Z HYP 1 1_555 H N ALA 2 Z ALA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale14 H N HYP 1 Z HYP 1 1_555 H C CYS 7 Z CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.465 ? 
covale ? covale15 H C TRP 3 Z TRP 3 1_555 H N G5G 4 Z G5G 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale16 H C G5G 4 Z G5G 4 1_555 H N ALA 5 Z ALA 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale17 H C ALA 5 Z ALA 5 1_555 H N ALO 6 Z ALO 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale18 H C ALO 6 Z ALO 6 1_555 H N CYS 7 Z CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? 
metalc ? metalc1 I MG MG . A MG 401 1_555 J O3B ADP . A ADP 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? 
metalc ? metalc2 K MG MG . B MG 401 1_555 L O2B ADP . B ADP 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? 
metalc ? metalc3 M MG MG . C MG 401 1_555 N O3B ADP . C ADP 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? 
metalc ? metalc4 O MG MG . D MG 401 1_555 P O2B ADP . D ADP 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? 
metalc ? metalc5 Q MG MG . E MG 401 1_555 R O2B ADP . E ADP 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? 
#
_chem_comp.formula           'C10 H15 N5 O10 P2' 
_chem_comp.formula_weight    427.201 
_chem_comp.id                ADP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              "ADENOSINE-5'-DIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PB O1B ADP doub 1 n n 
PB O2B ADP sing 2 n n 
PB O3B ADP sing 3 n n 
PB O3A ADP sing 4 n n 
O2B HOB2 ADP sing 5 n n 
O3B HOB3 ADP sing 6 n n 
PA O1A ADP doub 7 n n 
PA O2A ADP sing 8 n n 
PA O3A ADP sing 9 n n 
PA O5' ADP sing 10 n n 
O2A HOA2 ADP sing 11 n n 
O5' C5' ADP sing 12 n n 
C5' C4' ADP sing 13 n n 
C5' "H5'1" ADP sing 14 n n 
C5' "H5'2" ADP sing 15 n n 
C4' O4' ADP sing 16 n n 
C4' C3' ADP sing 17 n n 
C4' H4' ADP sing 18 n n 
O4' C1' ADP sing 19 n n 
C3' O3' ADP sing 20 n n 
C3' C2' ADP sing 21 n n 
C3' H3' ADP sing 22 n n 
O3' HO3' ADP sing 23 n n 
C2' O2' ADP sing 24 n n 
C2' C1' ADP sing 25 n n 
C2' H2' ADP sing 26 n n 
O2' HO2' ADP sing 27 n n 
C1' N9 ADP sing 28 n n 
C1' H1' ADP sing 29 n n 
N9 C8 ADP sing 30 n y 
N9 C4 ADP sing 31 n y 
C8 N7 ADP doub 32 n y 
C8 H8 ADP sing 33 n n 
N7 C5 ADP sing 34 n y 
C5 C6 ADP sing 35 n y 
C5 C4 ADP doub 36 n y 
C6 N6 ADP sing 37 n n 
C6 N1 ADP doub 38 n y 
N6 HN61 ADP sing 39 n n 
N6 HN62 ADP sing 40 n n 
N1 C2 ADP sing 41 n y 
C2 N3 ADP doub 42 n y 
C2 H2 ADP sing 43 n n 
N3 C4 ADP sing 44 n y 
#
_atom_sites.entry_id                     7BTI 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 3 MG A 1 401 401 MG MG . 
J 4 ADP A 1 402 402 ADP ADP . 
K 3 MG B 1 401 401 MG MG . 
L 4 ADP B 1 402 402 ADP ADP . 
M 3 MG C 1 401 401 MG MG . 
N 4 ADP C 1 402 402 ADP ADP . 
O 3 MG D 1 401 401 MG MG . 
P 4 ADP D 1 402 402 ADP ADP . 
Q 3 MG E 1 401 401 MG MG . 
R 4 ADP E 1 402 402 ADP ADP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PB ADP . . . L 4 176.404 159.482 213.22 1 51.52 ? PB ADP 402 B 1 
HETATM 2 O O1B ADP . . . L 4 175.782 158.383 212.52 1 51.52 ? O1B ADP 402 B 1 
HETATM 3 O O2B ADP . . . L 4 176.636 159.094 214.635 1 51.52 ? O2B ADP 402 B 1 
HETATM 4 O O3B ADP . . . L 4 175.529 160.687 213.153 1 51.52 ? O3B ADP 402 B 1 
HETATM 5 P PA ADP . . . L 4 179.096 158.7 212.52 1 51.52 ? PA ADP 402 B 1 
HETATM 6 O O1A ADP . . . L 4 178.542 157.329 212.249 1 51.52 ? O1A ADP 402 B 1 
HETATM 7 O O2A ADP . . . L 4 179.77 158.7 213.862 1 51.52 ? O2A ADP 402 B 1 
HETATM 8 O O3A ADP . . . L 4 177.838 159.81 212.513 1 51.52 ? O3A ADP 402 B 1 
HETATM 9 O O5' ADP . . . L 4 180.189 159.135 211.321 1 51.52 ? O5' ADP 402 B 1 
HETATM 10 C C5' ADP . . . L 4 179.671 159.863 210.221 1 51.52 ? C5' ADP 402 B 1 
HETATM 11 C C4' ADP . . . L 4 180.508 161.143 210.05 1 51.52 ? C4' ADP 402 B 1 
HETATM 12 O O4' ADP . . . L 4 181.714 160.919 210.527 1 51.52 ? O4' ADP 402 B 1 
HETATM 13 C C3' ADP . . . L 4 180.677 161.457 208.58 1 51.52 ? C3' ADP 402 B 1 
HETATM 14 O O3' ADP . . . L 4 179.84 162.485 208.24 1 51.52 ? O3' ADP 402 B 1 
HETATM 15 C C2' ADP . . . L 4 182.157 161.911 208.428 1 51.52 ? C2' ADP 402 B 1 
HETATM 16 O O2' ADP . . . L 4 182.199 163.416 208.4 1 51.52 ? O2' ADP 402 B 1 
HETATM 17 C C1' ADP . . . L 4 182.794 161.48 209.474 1 51.52 ? C1' ADP 402 B 1 
HETATM 18 N N9 ADP . . . L 4 183.73 160.398 209.111 1 51.52 ? N9 ADP 402 B 1 
HETATM 19 C C8 ADP . . . L 4 183.412 159.211 208.595 1 51.52 ? C8 ADP 402 B 1 
HETATM 20 N N7 ADP . . . L 4 184.545 158.517 208.413 1 51.52 ? N7 ADP 402 B 1 
HETATM 21 C C5 ADP . . . L 4 185.564 159.281 208.824 1 51.52 ? C5 ADP 402 B 1 
HETATM 22 C C6 ADP . . . L 4 186.921 159.059 208.856 1 51.52 ? C6 ADP 402 B 1 
HETATM 23 N N6 ADP . . . L 4 187.612 157.853 208.422 1 51.52 ? N6 ADP 402 B 1 
HETATM 24 N N1 ADP . . . L 4 187.733 160 209.32 1 51.52 ? N1 ADP 402 B 1 
HETATM 25 C C2 ADP . . . L 4 187.223 161.178 209.759 1 51.52 ? C2 ADP 402 B 1 
HETATM 26 N N3 ADP . . . L 4 185.885 161.394 209.725 1 51.52 ? N3 ADP 402 B 1 
HETATM 27 C C4 ADP . . . L 4 185.069 160.439 209.256 1 51.52 ? C4 ADP 402 B 1 
#
_model_server_stats.io_time_ms              118 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           229 
_model_server_stats.encode_time_ms          12 
_model_server_stats.element_count           27 
#