data_7BTZ # _model_server_result.job_id 0M-N3uljphW8yODIWqaRMA _model_server_result.datetime_utc '2025-08-31 00:53:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7btz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":301}' # _entry.id 7BTZ # _exptl.entry_id 7BTZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 384.411 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description S-ADENOSYL-L-HOMOCYSTEINE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7BTZ _cell.length_a 57.913 _cell.length_b 69.931 _cell.length_c 127.27 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7BTZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C14 H20 N6 O5 S' _chem_comp.formula_weight 384.411 _chem_comp.id SAH _chem_comp.mon_nstd_flag n _chem_comp.name S-ADENOSYL-L-HOMOCYSTEINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA SAH sing 277 n n N HN1 SAH sing 278 n n N HN2 SAH sing 279 n n CA CB SAH sing 280 n n CA C SAH sing 281 n n CA HA SAH sing 282 n n CB CG SAH sing 283 n n CB HB1 SAH sing 284 n n CB HB2 SAH sing 285 n n CG SD SAH sing 286 n n CG HG1 SAH sing 287 n n CG HG2 SAH sing 288 n n SD C5' SAH sing 289 n n C O SAH doub 290 n n C OXT SAH sing 291 n n OXT HXT SAH sing 292 n n C5' C4' SAH sing 293 n n C5' "H5'1" SAH sing 294 n n C5' "H5'2" SAH sing 295 n n C4' O4' SAH sing 296 n n C4' C3' SAH sing 297 n n C4' H4' SAH sing 298 n n O4' C1' SAH sing 299 n n C3' O3' SAH sing 300 n n C3' C2' SAH sing 301 n n C3' H3' SAH sing 302 n n O3' HO3' SAH sing 303 n n C2' O2' SAH sing 304 n n C2' C1' SAH sing 305 n n C2' H2' SAH sing 306 n n O2' HO2' SAH sing 307 n n C1' N9 SAH sing 308 n n C1' H1' SAH sing 309 n n N9 C8 SAH sing 310 n y N9 C4 SAH sing 311 n y C8 N7 SAH doub 312 n y C8 H8 SAH sing 313 n n N7 C5 SAH sing 314 n y C5 C6 SAH sing 315 n y C5 C4 SAH doub 316 n y C6 N6 SAH sing 317 n n C6 N1 SAH doub 318 n y N6 HN61 SAH sing 319 n n N6 HN62 SAH sing 320 n n N1 C2 SAH sing 321 n y C2 N3 SAH doub 322 n y C2 H2 SAH sing 323 n n N3 C4 SAH sing 324 n y # _atom_sites.entry_id 7BTZ _atom_sites.fract_transf_matrix[1][1] 0.017267 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0143 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007857 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SAH A 1 401 401 SAH SAH . D 2 SAH B 1 301 402 SAH SAH . E 3 HOH A 1 501 42 HOH HOH . E 3 HOH A 2 502 35 HOH HOH . E 3 HOH A 3 503 2 HOH HOH . E 3 HOH A 4 504 9 HOH HOH . E 3 HOH A 5 505 30 HOH HOH . E 3 HOH A 6 506 8 HOH HOH . E 3 HOH A 7 507 15 HOH HOH . E 3 HOH A 8 508 39 HOH HOH . E 3 HOH A 9 509 19 HOH HOH . E 3 HOH A 10 510 11 HOH HOH . E 3 HOH A 11 511 40 HOH HOH . E 3 HOH A 12 512 18 HOH HOH . E 3 HOH A 13 513 14 HOH HOH . E 3 HOH A 14 514 28 HOH HOH . E 3 HOH A 15 515 60 HOH HOH . E 3 HOH A 16 516 43 HOH HOH . E 3 HOH A 17 517 59 HOH HOH . E 3 HOH A 18 518 29 HOH HOH . E 3 HOH A 19 519 4 HOH HOH . E 3 HOH A 20 520 54 HOH HOH . E 3 HOH A 21 521 13 HOH HOH . E 3 HOH A 22 522 33 HOH HOH . E 3 HOH A 23 523 47 HOH HOH . E 3 HOH A 24 524 45 HOH HOH . E 3 HOH A 25 525 21 HOH HOH . E 3 HOH A 26 526 61 HOH HOH . E 3 HOH A 27 527 49 HOH HOH . E 3 HOH A 28 528 53 HOH HOH . E 3 HOH A 29 529 62 HOH HOH . E 3 HOH A 30 530 24 HOH HOH . E 3 HOH A 31 531 64 HOH HOH . E 3 HOH A 32 532 38 HOH HOH . E 3 HOH A 33 533 57 HOH HOH . E 3 HOH A 34 534 67 HOH HOH . F 3 HOH B 1 401 56 HOH HOH . F 3 HOH B 2 402 5 HOH HOH . F 3 HOH B 3 403 44 HOH HOH . F 3 HOH B 4 404 32 HOH HOH . F 3 HOH B 5 405 55 HOH HOH . F 3 HOH B 6 406 7 HOH HOH . F 3 HOH B 7 407 22 HOH HOH . F 3 HOH B 8 408 27 HOH HOH . F 3 HOH B 9 409 50 HOH HOH . F 3 HOH B 10 410 3 HOH HOH . F 3 HOH B 11 411 1 HOH HOH . F 3 HOH B 12 412 6 HOH HOH . F 3 HOH B 13 413 41 HOH HOH . F 3 HOH B 14 414 10 HOH HOH . F 3 HOH B 15 415 36 HOH HOH . F 3 HOH B 16 416 23 HOH HOH . F 3 HOH B 17 417 12 HOH HOH . F 3 HOH B 18 418 20 HOH HOH . F 3 HOH B 19 419 52 HOH HOH . F 3 HOH B 20 420 48 HOH HOH . F 3 HOH B 21 421 17 HOH HOH . F 3 HOH B 22 422 25 HOH HOH . F 3 HOH B 23 423 31 HOH HOH . F 3 HOH B 24 424 58 HOH HOH . F 3 HOH B 25 425 37 HOH HOH . F 3 HOH B 26 426 46 HOH HOH . F 3 HOH B 27 427 26 HOH HOH . F 3 HOH B 28 428 34 HOH HOH . F 3 HOH B 29 429 68 HOH HOH . F 3 HOH B 30 430 51 HOH HOH . F 3 HOH B 31 431 16 HOH HOH . F 3 HOH B 32 432 69 HOH HOH . F 3 HOH B 33 433 63 HOH HOH . F 3 HOH B 34 434 65 HOH HOH . F 3 HOH B 35 435 66 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N SAH . . . D 2 -17.879 -2.251 1.491 1 21.84 ? N SAH 301 B 1 HETATM 2 C CA SAH . . . D 2 -18.096 -3.376 2.415 1 27.88 ? CA SAH 301 B 1 HETATM 3 C CB SAH . . . D 2 -19.066 -4.385 1.834 1 30.19 ? CB SAH 301 B 1 HETATM 4 C CG SAH . . . D 2 -19.437 -3.876 0.461 1 44.92 ? CG SAH 301 B 1 HETATM 5 S SD SAH . . . D 2 -18.404 -4.608 -0.856 1 42.57 ? SD SAH 301 B 1 HETATM 6 C C SAH . . . D 2 -16.761 -4.047 2.726 1 28.96 ? C SAH 301 B 1 HETATM 7 O O SAH . . . D 2 -15.77 -3.651 2.076 1 27.06 ? O SAH 301 B 1 HETATM 8 O OXT SAH . . . D 2 -16.765 -4.936 3.608 1 24.92 ? OXT SAH 301 B 1 HETATM 9 C C5' SAH . . . D 2 -19.576 -4.417 -2.244 1 38.15 ? C5' SAH 301 B 1 HETATM 10 C C4' SAH . . . D 2 -20.832 -5.304 -2.21 1 40.94 ? C4' SAH 301 B 1 HETATM 11 O O4' SAH . . . D 2 -21.492 -5.454 -0.95 1 38.73 ? O4' SAH 301 B 1 HETATM 12 C C3' SAH . . . D 2 -21.941 -4.533 -2.872 1 42.41 ? C3' SAH 301 B 1 HETATM 13 O O3' SAH . . . D 2 -21.678 -4.344 -4.274 1 46.63 ? O3' SAH 301 B 1 HETATM 14 C C2' SAH . . . D 2 -23.135 -5.448 -2.64 1 38.62 ? C2' SAH 301 B 1 HETATM 15 O O2' SAH . . . D 2 -23.179 -6.458 -3.641 1 37.12 ? O2' SAH 301 B 1 HETATM 16 C C1' SAH . . . D 2 -22.737 -6.106 -1.312 1 35.68 ? C1' SAH 301 B 1 HETATM 17 N N9 SAH . . . D 2 -23.746 -5.916 -0.235 1 36.41 ? N9 SAH 301 B 1 HETATM 18 C C8 SAH . . . D 2 -24.197 -4.755 0.24 1 32.48 ? C8 SAH 301 B 1 HETATM 19 N N7 SAH . . . D 2 -25.087 -5.021 1.192 1 31.97 ? N7 SAH 301 B 1 HETATM 20 C C5 SAH . . . D 2 -25.178 -6.343 1.316 1 33.62 ? C5 SAH 301 B 1 HETATM 21 C C6 SAH . . . D 2 -25.913 -7.108 2.129 1 37.43 ? C6 SAH 301 B 1 HETATM 22 N N6 SAH . . . D 2 -26.71 -6.469 2.983 1 31.28 ? N6 SAH 301 B 1 HETATM 23 N N1 SAH . . . D 2 -25.85 -8.447 2.092 1 40.05 ? N1 SAH 301 B 1 HETATM 24 C C2 SAH . . . D 2 -24.987 -9.057 1.174 1 39.87 ? C2 SAH 301 B 1 HETATM 25 N N3 SAH . . . D 2 -24.227 -8.232 0.337 1 42.76 ? N3 SAH 301 B 1 HETATM 26 C C4 SAH . . . D 2 -24.345 -6.897 0.431 1 35.36 ? C4 SAH 301 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 396 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 26 #