data_7BU4 # _model_server_result.job_id 61RbZG0dvyGcKgBffedK7g _model_server_result.datetime_utc '2024-11-09 02:00:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7bu4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 7BU4 # _exptl.entry_id 7BU4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 375.338 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(6-aminocarbonyl-8-oxidanylidene-9-phenyl-7H-purin-2-yl)benzoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7BU4 _cell.length_a 48.27 _cell.length_b 82.82 _cell.length_c 79.132 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7BU4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H13 N5 O4' _chem_comp.formula_weight 375.338 _chem_comp.id Y49 _chem_comp.mon_nstd_flag . _chem_comp.name '4-(6-aminocarbonyl-8-oxidanylidene-9-phenyl-7H-purin-2-yl)benzoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O24 C23 Y49 doub 376 n n N25 C23 Y49 sing 377 n n C23 C04 Y49 sing 378 n n N09 C08 Y49 sing 379 n n N09 C06 Y49 sing 380 n n O22 C08 Y49 doub 381 n n C08 N07 Y49 sing 382 n n C04 C06 Y49 doub 383 n y C04 N02 Y49 sing 384 n y C06 C05 Y49 sing 385 n y N02 C01 Y49 doub 386 n y N07 C05 Y49 sing 387 n n N07 C10 Y49 sing 388 n n C05 N03 Y49 doub 389 n y C12 C10 Y49 doub 390 n y C12 C14 Y49 sing 391 n y C10 C11 Y49 sing 392 n y C01 N03 Y49 sing 393 n y C01 C16 Y49 sing 394 n n C14 C15 Y49 doub 395 n y C17 C16 Y49 doub 396 n y C17 C19 Y49 sing 397 n y C11 C13 Y49 doub 398 n y C16 C18 Y49 sing 399 n y C15 C13 Y49 sing 400 n y C19 C21 Y49 doub 401 n y C18 C20 Y49 doub 402 n y C21 C20 Y49 sing 403 n y C21 C26 Y49 sing 404 n n C26 O28 Y49 doub 405 n n C26 O27 Y49 sing 406 n n N09 H1 Y49 sing 407 n n C11 H2 Y49 sing 408 n n C12 H3 Y49 sing 409 n n C13 H4 Y49 sing 410 n n C14 H5 Y49 sing 411 n n C15 H6 Y49 sing 412 n n C17 H7 Y49 sing 413 n n C18 H8 Y49 sing 414 n n C19 H9 Y49 sing 415 n n C20 H10 Y49 sing 416 n n N25 H11 Y49 sing 417 n n N25 H12 Y49 sing 418 n n O27 H13 Y49 sing 419 n n # _atom_sites.entry_id 7BU4 _atom_sites.fract_transf_matrix[1][1] 0.020717 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012074 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012637 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 Y49 A 1 401 1 Y49 Y49 . C 3 HOH A 1 501 155 HOH HOH . C 3 HOH A 2 502 166 HOH HOH . C 3 HOH A 3 503 55 HOH HOH . C 3 HOH A 4 504 57 HOH HOH . C 3 HOH A 5 505 154 HOH HOH . C 3 HOH A 6 506 61 HOH HOH . C 3 HOH A 7 507 144 HOH HOH . C 3 HOH A 8 508 94 HOH HOH . C 3 HOH A 9 509 72 HOH HOH . C 3 HOH A 10 510 37 HOH HOH . C 3 HOH A 11 511 29 HOH HOH . C 3 HOH A 12 512 54 HOH HOH . C 3 HOH A 13 513 146 HOH HOH . C 3 HOH A 14 514 64 HOH HOH . C 3 HOH A 15 515 97 HOH HOH . C 3 HOH A 16 516 99 HOH HOH . C 3 HOH A 17 517 5 HOH HOH . C 3 HOH A 18 518 22 HOH HOH . C 3 HOH A 19 519 16 HOH HOH . C 3 HOH A 20 520 28 HOH HOH . C 3 HOH A 21 521 36 HOH HOH . C 3 HOH A 22 522 25 HOH HOH . C 3 HOH A 23 523 43 HOH HOH . C 3 HOH A 24 524 70 HOH HOH . C 3 HOH A 25 525 101 HOH HOH . C 3 HOH A 26 526 185 HOH HOH . C 3 HOH A 27 527 1 HOH HOH . C 3 HOH A 28 528 40 HOH HOH . C 3 HOH A 29 529 123 HOH HOH . C 3 HOH A 30 530 131 HOH HOH . C 3 HOH A 31 531 110 HOH HOH . C 3 HOH A 32 532 59 HOH HOH . C 3 HOH A 33 533 50 HOH HOH . C 3 HOH A 34 534 151 HOH HOH . C 3 HOH A 35 535 172 HOH HOH . C 3 HOH A 36 536 23 HOH HOH . C 3 HOH A 37 537 111 HOH HOH . C 3 HOH A 38 538 181 HOH HOH . C 3 HOH A 39 539 62 HOH HOH . C 3 HOH A 40 540 130 HOH HOH . C 3 HOH A 41 541 33 HOH HOH . C 3 HOH A 42 542 26 HOH HOH . C 3 HOH A 43 543 78 HOH HOH . C 3 HOH A 44 544 17 HOH HOH . C 3 HOH A 45 545 89 HOH HOH . C 3 HOH A 46 546 135 HOH HOH . C 3 HOH A 47 547 35 HOH HOH . C 3 HOH A 48 548 176 HOH HOH . C 3 HOH A 49 549 7 HOH HOH . C 3 HOH A 50 550 125 HOH HOH . C 3 HOH A 51 551 197 HOH HOH . C 3 HOH A 52 552 188 HOH HOH . C 3 HOH A 53 553 71 HOH HOH . C 3 HOH A 54 554 158 HOH HOH . C 3 HOH A 55 555 119 HOH HOH . C 3 HOH A 56 556 66 HOH HOH . C 3 HOH A 57 557 60 HOH HOH . C 3 HOH A 58 558 106 HOH HOH . C 3 HOH A 59 559 4 HOH HOH . C 3 HOH A 60 560 13 HOH HOH . C 3 HOH A 61 561 124 HOH HOH . C 3 HOH A 62 562 14 HOH HOH . C 3 HOH A 63 563 114 HOH HOH . C 3 HOH A 64 564 93 HOH HOH . C 3 HOH A 65 565 92 HOH HOH . C 3 HOH A 66 566 46 HOH HOH . C 3 HOH A 67 567 120 HOH HOH . C 3 HOH A 68 568 6 HOH HOH . C 3 HOH A 69 569 44 HOH HOH . C 3 HOH A 70 570 32 HOH HOH . C 3 HOH A 71 571 39 HOH HOH . C 3 HOH A 72 572 81 HOH HOH . C 3 HOH A 73 573 77 HOH HOH . C 3 HOH A 74 574 88 HOH HOH . C 3 HOH A 75 575 19 HOH HOH . C 3 HOH A 76 576 24 HOH HOH . C 3 HOH A 77 577 133 HOH HOH . C 3 HOH A 78 578 51 HOH HOH . C 3 HOH A 79 579 8 HOH HOH . C 3 HOH A 80 580 18 HOH HOH . C 3 HOH A 81 581 34 HOH HOH . C 3 HOH A 82 582 10 HOH HOH . C 3 HOH A 83 583 21 HOH HOH . C 3 HOH A 84 584 153 HOH HOH . C 3 HOH A 85 585 145 HOH HOH . C 3 HOH A 86 586 116 HOH HOH . C 3 HOH A 87 587 15 HOH HOH . C 3 HOH A 88 588 2 HOH HOH . C 3 HOH A 89 589 76 HOH HOH . C 3 HOH A 90 590 20 HOH HOH . C 3 HOH A 91 591 164 HOH HOH . C 3 HOH A 92 592 109 HOH HOH . C 3 HOH A 93 593 178 HOH HOH . C 3 HOH A 94 594 12 HOH HOH . C 3 HOH A 95 595 105 HOH HOH . C 3 HOH A 96 596 150 HOH HOH . C 3 HOH A 97 597 174 HOH HOH . C 3 HOH A 98 598 68 HOH HOH . C 3 HOH A 99 599 98 HOH HOH . C 3 HOH A 100 600 63 HOH HOH . C 3 HOH A 101 601 167 HOH HOH . C 3 HOH A 102 602 79 HOH HOH . C 3 HOH A 103 603 129 HOH HOH . C 3 HOH A 104 604 143 HOH HOH . C 3 HOH A 105 605 49 HOH HOH . C 3 HOH A 106 606 3 HOH HOH . C 3 HOH A 107 607 182 HOH HOH . C 3 HOH A 108 608 11 HOH HOH . C 3 HOH A 109 609 141 HOH HOH . C 3 HOH A 110 610 53 HOH HOH . C 3 HOH A 111 611 65 HOH HOH . C 3 HOH A 112 612 69 HOH HOH . C 3 HOH A 113 613 139 HOH HOH . C 3 HOH A 114 614 74 HOH HOH . C 3 HOH A 115 615 48 HOH HOH . C 3 HOH A 116 616 30 HOH HOH . C 3 HOH A 117 617 117 HOH HOH . C 3 HOH A 118 618 42 HOH HOH . C 3 HOH A 119 619 100 HOH HOH . C 3 HOH A 120 620 87 HOH HOH . C 3 HOH A 121 621 148 HOH HOH . C 3 HOH A 122 622 126 HOH HOH . C 3 HOH A 123 623 157 HOH HOH . C 3 HOH A 124 624 163 HOH HOH . C 3 HOH A 125 625 56 HOH HOH . C 3 HOH A 126 626 41 HOH HOH . C 3 HOH A 127 627 82 HOH HOH . C 3 HOH A 128 628 170 HOH HOH . C 3 HOH A 129 629 38 HOH HOH . C 3 HOH A 130 630 73 HOH HOH . C 3 HOH A 131 631 156 HOH HOH . C 3 HOH A 132 632 128 HOH HOH . C 3 HOH A 133 633 121 HOH HOH . C 3 HOH A 134 634 190 HOH HOH . C 3 HOH A 135 635 175 HOH HOH . C 3 HOH A 136 636 9 HOH HOH . C 3 HOH A 137 637 165 HOH HOH . C 3 HOH A 138 638 45 HOH HOH . C 3 HOH A 139 639 132 HOH HOH . C 3 HOH A 140 640 147 HOH HOH . C 3 HOH A 141 641 58 HOH HOH . C 3 HOH A 142 642 196 HOH HOH . C 3 HOH A 143 643 31 HOH HOH . C 3 HOH A 144 644 75 HOH HOH . C 3 HOH A 145 645 187 HOH HOH . C 3 HOH A 146 646 80 HOH HOH . C 3 HOH A 147 647 96 HOH HOH . C 3 HOH A 148 648 169 HOH HOH . C 3 HOH A 149 649 47 HOH HOH . C 3 HOH A 150 650 113 HOH HOH . C 3 HOH A 151 651 103 HOH HOH . C 3 HOH A 152 652 159 HOH HOH . C 3 HOH A 153 653 140 HOH HOH . C 3 HOH A 154 654 52 HOH HOH . C 3 HOH A 155 655 152 HOH HOH . C 3 HOH A 156 656 104 HOH HOH . C 3 HOH A 157 657 85 HOH HOH . C 3 HOH A 158 658 136 HOH HOH . C 3 HOH A 159 659 86 HOH HOH . C 3 HOH A 160 660 90 HOH HOH . C 3 HOH A 161 661 102 HOH HOH . C 3 HOH A 162 662 168 HOH HOH . C 3 HOH A 163 663 160 HOH HOH . C 3 HOH A 164 664 138 HOH HOH . C 3 HOH A 165 665 179 HOH HOH . C 3 HOH A 166 666 107 HOH HOH . C 3 HOH A 167 667 186 HOH HOH . C 3 HOH A 168 668 183 HOH HOH . C 3 HOH A 169 669 112 HOH HOH . C 3 HOH A 170 670 27 HOH HOH . C 3 HOH A 171 671 180 HOH HOH . C 3 HOH A 172 672 194 HOH HOH . C 3 HOH A 173 673 127 HOH HOH . C 3 HOH A 174 674 67 HOH HOH . C 3 HOH A 175 675 137 HOH HOH . C 3 HOH A 176 676 83 HOH HOH . C 3 HOH A 177 677 142 HOH HOH . C 3 HOH A 178 678 115 HOH HOH . C 3 HOH A 179 679 91 HOH HOH . C 3 HOH A 180 680 95 HOH HOH . C 3 HOH A 181 681 184 HOH HOH . C 3 HOH A 182 682 177 HOH HOH . C 3 HOH A 183 683 84 HOH HOH . C 3 HOH A 184 684 108 HOH HOH . C 3 HOH A 185 685 149 HOH HOH . C 3 HOH A 186 686 134 HOH HOH . C 3 HOH A 187 687 195 HOH HOH . C 3 HOH A 188 688 118 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 Y49 . . . B 2 0.66 8.472 -24.508 1 27.43 ? C01 Y49 401 A 1 HETATM 2 N N02 Y49 . . . B 2 0.424 7.902 -25.76 1 29.43 ? N02 Y49 401 A 1 HETATM 3 N N03 Y49 . . . B 2 1.068 9.771 -24.348 1 28.83 ? N03 Y49 401 A 1 HETATM 4 C C04 Y49 . . . B 2 0.646 8.625 -26.884 1 30.26 ? C04 Y49 401 A 1 HETATM 5 C C05 Y49 . . . B 2 1.295 10.499 -25.484 1 30.29 ? C05 Y49 401 A 1 HETATM 6 C C06 Y49 . . . B 2 1.102 9.974 -26.814 1 32.02 ? C06 Y49 401 A 1 HETATM 7 N N07 Y49 . . . B 2 1.743 11.853 -25.63 1 35.24 ? N07 Y49 401 A 1 HETATM 8 C C08 Y49 . . . B 2 1.788 12.041 -27.055 1 37.23 ? C08 Y49 401 A 1 HETATM 9 N N09 Y49 . . . B 2 1.416 10.956 -27.791 1 34.41 ? N09 Y49 401 A 1 HETATM 10 C C10 Y49 . . . B 2 2.077 12.818 -24.578 1 36.85 ? C10 Y49 401 A 1 HETATM 11 C C11 Y49 . . . B 2 2.315 12.384 -23.263 1 42.1 ? C11 Y49 401 A 1 HETATM 12 C C12 Y49 . . . B 2 2.161 14.193 -24.843 1 40.94 ? C12 Y49 401 A 1 HETATM 13 C C13 Y49 . . . B 2 2.635 13.301 -22.252 1 39.7 ? C13 Y49 401 A 1 HETATM 14 C C14 Y49 . . . B 2 2.481 15.102 -23.825 1 38.85 ? C14 Y49 401 A 1 HETATM 15 C C15 Y49 . . . B 2 2.72 14.666 -22.521 1 41.3 ? C15 Y49 401 A 1 HETATM 16 C C16 Y49 . . . B 2 0.364 7.66 -23.254 1 21.06 ? C16 Y49 401 A 1 HETATM 17 C C17 Y49 . . . B 2 -0.417 6.482 -23.279 1 27.62 ? C17 Y49 401 A 1 HETATM 18 C C18 Y49 . . . B 2 0.768 8.063 -21.974 1 26.58 ? C18 Y49 401 A 1 HETATM 19 C C19 Y49 . . . B 2 -0.743 5.741 -22.114 1 21.37 ? C19 Y49 401 A 1 HETATM 20 C C20 Y49 . . . B 2 0.451 7.327 -20.817 1 25.86 ? C20 Y49 401 A 1 HETATM 21 C C21 Y49 . . . B 2 -0.316 6.158 -20.86 1 25.45 ? C21 Y49 401 A 1 HETATM 22 O O22 Y49 . . . B 2 2.183 13.243 -27.554 1 43.66 ? O22 Y49 401 A 1 HETATM 23 C C23 Y49 . . . B 2 0.398 7.909 -28.202 1 32.38 ? C23 Y49 401 A 1 HETATM 24 O O24 Y49 . . . B 2 0.541 8.499 -29.263 1 32.17 ? O24 Y49 401 A 1 HETATM 25 N N25 Y49 . . . B 2 0.02 6.53 -28.237 1 29.11 ? N25 Y49 401 A 1 HETATM 26 C C26 Y49 . . . B 2 -0.608 5.381 -19.558 1 29.55 ? C26 Y49 401 A 1 HETATM 27 O O27 Y49 . . . B 2 0.173 5.663 -18.614 1 30.83 ? O27 Y49 401 A 1 HETATM 28 O O28 Y49 . . . B 2 -1.56 4.555 -19.502 1 23.79 ? O28 Y49 401 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 28 #