data_7BU6 # _model_server_result.job_id S5tFtV_nl0nFUkEVq06vog _model_server_result.datetime_utc '2024-11-23 10:41:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7bu6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1402}' # _entry.id 7BU6 # _exptl.entry_id 7BU6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 170.186 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Noradrenaline _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.458 _cell.angle_gamma 90 _cell.entry_id 7BU6 _cell.length_a 376.779 _cell.length_b 66.009 _cell.length_c 47.841 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7BU6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 3 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 3 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 GLC _pdbx_entity_branch_link.comp_id_2 GLC _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 3 n C GLC 1 C 1 GLC B 402 MAL 3 n C GLC 2 C 2 GLC B 402 MAL # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 248 A CYS 1131 1_555 A SG CYS 333 A CYS 1216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf2 A SG CYS 326 A CYS 1209 1_555 A SG CYS 332 A CYS 1215 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf3 B SG CYS 22 B CYS 22 1_555 B SG CYS 95 B CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? covale ? covale1 C O4 GLC . C GLC 1 1_555 C C1 GLC . C GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 sing metalc ? metalc1 A O CYS 326 A CYS 1209 1_555 L NA NA . A NA 1410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? metalc ? metalc2 A O ASP 329 A ASP 1212 1_555 L NA NA . A NA 1410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? metalc ? metalc3 A O CYS 332 A CYS 1215 1_555 L NA NA . A NA 1410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? metalc ? metalc4 L NA NA . A NA 1410 1_555 Q O HOH . A HOH 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.716 ? metalc ? metalc5 L NA NA . A NA 1410 1_555 Q O HOH . A HOH 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.468 ? metalc ? metalc6 L NA NA . A NA 1410 1_555 Q O HOH . A HOH 1503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.44 ? # _chem_comp.formula 'C8 H12 N O3 1' _chem_comp.formula_weight 170.186 _chem_comp.id E5E _chem_comp.mon_nstd_flag . _chem_comp.name Noradrenaline _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAD CAL E5E sing 196 n n CAL CAK E5E sing 197 n n CAL CAH E5E sing 198 n n CAK CAF E5E doub 199 n y CAK CAG E5E sing 200 n y CAF CAE E5E sing 201 n y CAG CAJ E5E doub 202 n y CAE CAI E5E doub 203 n y CAJ CAI E5E sing 204 n y CAJ OAC E5E sing 205 n n CAI OAB E5E sing 206 n n CAH NAA E5E sing 207 n n OAC HOAC E5E sing 208 n n CAG HAG E5E sing 209 n n OAB HOAB E5E sing 210 n n CAE HAE E5E sing 211 n n CAF HAF E5E sing 212 n n CAL HAL E5E sing 213 n n OAD HOAD E5E sing 214 n n CAH HAH E5E sing 215 n n CAH HAHA E5E sing 216 n n NAA HNAA E5E sing 217 n n NAA HNAB E5E sing 218 n n NAA HNAC E5E sing 219 n n # _atom_sites.entry_id 7BU6 _atom_sites.fract_transf_matrix[1][1] 0.002654 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00016 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015149 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020941 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 E5E A 1 1402 1 E5E DRG . E 5 SO4 A 1 1403 1 SO4 SO4 . F 5 SO4 A 1 1404 3 SO4 SO4 . G 5 SO4 A 1 1405 4 SO4 SO4 . H 5 SO4 A 1 1406 6 SO4 SO4 . I 5 SO4 A 1 1407 7 SO4 SO4 . J 5 SO4 A 1 1408 8 SO4 SO4 . K 5 SO4 A 1 1409 9 SO4 SO4 . L 6 NA A 1 1410 1 NA NA . M 7 EPE A 1 1411 1 EPE EPE . N 8 480 A 1 1412 1403 480 1WV . O 9 CLR A 1 1413 413 CLR CLR . P 10 PG4 A 1 1414 3 PG4 PG4 . Q 11 HOH A 1 1501 3 HOH HOH . Q 11 HOH A 2 1502 2 HOH HOH . Q 11 HOH A 3 1503 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAC E5E . . . D 4 -62.986 28.422 8.137 1 53.96 ? OAC E5E 1402 A 1 HETATM 2 C CAJ E5E . . . D 4 -62.238 27.308 7.906 1 54.09 ? CAJ E5E 1402 A 1 HETATM 3 C CAG E5E . . . D 4 -62.708 26.298 7.074 1 51.24 ? CAG E5E 1402 A 1 HETATM 4 C CAI E5E . . . D 4 -60.995 27.189 8.51 1 54.54 ? CAI E5E 1402 A 1 HETATM 5 O OAB E5E . . . D 4 -60.552 28.188 9.32 1 54.94 ? OAB E5E 1402 A 1 HETATM 6 C CAE E5E . . . D 4 -60.213 26.06 8.288 1 51.24 ? CAE E5E 1402 A 1 HETATM 7 C CAF E5E . . . D 4 -60.679 25.049 7.457 1 49.01 ? CAF E5E 1402 A 1 HETATM 8 C CAK E5E . . . D 4 -61.924 25.169 6.85 1 56.22 ? CAK E5E 1402 A 1 HETATM 9 C CAL E5E . . . D 4 -62.432 24.052 5.941 1 56.66 ? CAL E5E 1402 A 1 HETATM 10 O OAD E5E . . . D 4 -61.618 22.92 6.089 1 49.37 ? OAD E5E 1402 A 1 HETATM 11 C CAH E5E . . . D 4 -63.871 23.712 6.331 1 48.25 ? CAH E5E 1402 A 1 HETATM 12 N NAA E5E . . . D 4 -64.157 22.329 5.999 1 44.42 ? NAA E5E 1402 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 345 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 12 #