data_7BU7 # _model_server_result.job_id AzS__kAifTl4CLCHrvtqUg _model_server_result.datetime_utc '2025-02-26 14:58:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7bu7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":1409}' # _entry.id 7BU7 # _exptl.entry_id 7BU7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 386.654 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.883 _cell.angle_gamma 90 _cell.entry_id 7BU7 _cell.length_a 377.98 _cell.length_b 66.22 _cell.length_c 47.86 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7BU7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id K _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 3 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 3 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 GLC _pdbx_entity_branch_link.comp_id_2 GLC _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 3 n C GLC 1 C 1 GLC B 401 MAL 3 n C GLC 2 C 2 GLC B 401 MAL 3 n D GLC 1 D 1 GLC B 402 MAL 3 n D GLC 2 D 2 GLC B 402 MAL # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 248 A CYS 1131 1_555 A SG CYS 333 A CYS 1216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 A SG CYS 326 A CYS 1209 1_555 A SG CYS 332 A CYS 1215 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf3 B SG CYS 22 B CYS 22 1_555 B SG CYS 95 B CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? covale ? covale1 C O4 GLC . C GLC 1 1_555 C C1 GLC . C GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 sing covale ? covale2 D O4 GLC . D GLC 1 1_555 D C1 GLC . D GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.354 sing metalc ? metalc1 A O CYS 326 A CYS 1209 1_555 M NA NA . A NA 1411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? metalc ? metalc2 A O ASP 329 A ASP 1212 1_555 M NA NA . A NA 1411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.478 ? metalc ? metalc3 A O CYS 332 A CYS 1215 1_555 M NA NA . A NA 1411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.985 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CLR sing 122 n n C1 C10 CLR sing 123 n n C1 H11 CLR sing 124 n n C1 H12 CLR sing 125 n n C2 C3 CLR sing 126 n n C2 H21 CLR sing 127 n n C2 H22 CLR sing 128 n n C3 C4 CLR sing 129 n n C3 O1 CLR sing 130 n n C3 H3 CLR sing 131 n n C4 C5 CLR sing 132 n n C4 H41 CLR sing 133 n n C4 H42 CLR sing 134 n n C5 C6 CLR doub 135 n n C5 C10 CLR sing 136 n n C6 C7 CLR sing 137 n n C6 H6 CLR sing 138 n n C7 C8 CLR sing 139 n n C7 H71 CLR sing 140 n n C7 H72 CLR sing 141 n n C8 C9 CLR sing 142 n n C8 C14 CLR sing 143 n n C8 H8 CLR sing 144 n n C9 C10 CLR sing 145 n n C9 C11 CLR sing 146 n n C9 H9 CLR sing 147 n n C10 C19 CLR sing 148 n n C11 C12 CLR sing 149 n n C11 H111 CLR sing 150 n n C11 H112 CLR sing 151 n n C12 C13 CLR sing 152 n n C12 H121 CLR sing 153 n n C12 H122 CLR sing 154 n n C13 C14 CLR sing 155 n n C13 C17 CLR sing 156 n n C13 C18 CLR sing 157 n n C14 C15 CLR sing 158 n n C14 H14 CLR sing 159 n n C15 C16 CLR sing 160 n n C15 H151 CLR sing 161 n n C15 H152 CLR sing 162 n n C16 C17 CLR sing 163 n n C16 H161 CLR sing 164 n n C16 H162 CLR sing 165 n n C17 C20 CLR sing 166 n n C17 H17 CLR sing 167 n n C18 H181 CLR sing 168 n n C18 H182 CLR sing 169 n n C18 H183 CLR sing 170 n n C19 H191 CLR sing 171 n n C19 H192 CLR sing 172 n n C19 H193 CLR sing 173 n n C20 C21 CLR sing 174 n n C20 C22 CLR sing 175 n n C20 H20 CLR sing 176 n n C21 H211 CLR sing 177 n n C21 H212 CLR sing 178 n n C21 H213 CLR sing 179 n n C22 C23 CLR sing 180 n n C22 H221 CLR sing 181 n n C22 H222 CLR sing 182 n n C23 C24 CLR sing 183 n n C23 H231 CLR sing 184 n n C23 H232 CLR sing 185 n n C24 C25 CLR sing 186 n n C24 H241 CLR sing 187 n n C24 H242 CLR sing 188 n n C25 C26 CLR sing 189 n n C25 C27 CLR sing 190 n n C25 H25 CLR sing 191 n n C26 H261 CLR sing 192 n n C26 H262 CLR sing 193 n n C26 H263 CLR sing 194 n n C27 H271 CLR sing 195 n n C27 H272 CLR sing 196 n n C27 H273 CLR sing 197 n n O1 H1 CLR sing 198 n n # _atom_sites.entry_id 7BU7 _atom_sites.fract_transf_matrix[1][1] 0.002646 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00018 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015101 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020942 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 SO4 A 1 1403 1 SO4 SO4 . F 4 SO4 A 1 1404 2 SO4 SO4 . G 4 SO4 A 1 1405 3 SO4 SO4 . H 4 SO4 A 1 1406 4 SO4 SO4 . I 4 SO4 A 1 1407 5 SO4 SO4 . J 4 SO4 A 1 1408 8 SO4 SO4 . K 5 CLR A 1 1409 413 CLR CLR . L 6 1WV A 1 1410 1404 1WV 1WV . M 7 NA A 1 1411 1 NA NA . N 8 EPE A 1 1412 1 EPE EPE . O 9 P0G A 1 1413 1401 P0G P0G . P 10 P6G A 1 1414 2002 P6G P6G . Q 11 HOH A 1 1501 39 HOH HOH . Q 11 HOH A 2 1502 20 HOH HOH . Q 11 HOH A 3 1503 5 HOH HOH . Q 11 HOH A 4 1504 28 HOH HOH . Q 11 HOH A 5 1505 6 HOH HOH . Q 11 HOH A 6 1506 9 HOH HOH . Q 11 HOH A 7 1507 3 HOH HOH . Q 11 HOH A 8 1508 16 HOH HOH . Q 11 HOH A 9 1509 4 HOH HOH . Q 11 HOH A 10 1510 11 HOH HOH . Q 11 HOH A 11 1511 1 HOH HOH . Q 11 HOH A 12 1512 22 HOH HOH . Q 11 HOH A 13 1513 17 HOH HOH . Q 11 HOH A 14 1514 18 HOH HOH . Q 11 HOH A 15 1515 23 HOH HOH . Q 11 HOH A 16 1516 2 HOH HOH . Q 11 HOH A 17 1517 37 HOH HOH . Q 11 HOH A 18 1518 8 HOH HOH . Q 11 HOH A 19 1519 15 HOH HOH . Q 11 HOH A 20 1520 35 HOH HOH . Q 11 HOH A 21 1521 13 HOH HOH . Q 11 HOH A 22 1522 12 HOH HOH . Q 11 HOH A 23 1523 24 HOH HOH . Q 11 HOH A 24 1524 36 HOH HOH . Q 11 HOH A 25 1525 38 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . K 5 -68.015 41.346 0.647 1 89.69 ? C1 CLR 1409 A 1 HETATM 2 C C2 CLR . . . K 5 -69.491 41.693 0.535 1 83.14 ? C2 CLR 1409 A 1 HETATM 3 C C3 CLR . . . K 5 -69.749 42.446 -0.782 1 85.33 ? C3 CLR 1409 A 1 HETATM 4 C C4 CLR . . . K 5 -69.408 41.561 -1.987 1 91.46 ? C4 CLR 1409 A 1 HETATM 5 C C5 CLR . . . K 5 -67.922 41.301 -1.887 1 91.85 ? C5 CLR 1409 A 1 HETATM 6 C C6 CLR . . . K 5 -67.135 41.635 -2.939 1 94.72 ? C6 CLR 1409 A 1 HETATM 7 C C7 CLR . . . K 5 -65.644 41.436 -2.962 1 93.48 ? C7 CLR 1409 A 1 HETATM 8 C C8 CLR . . . K 5 -65.166 40.512 -1.858 1 91.03 ? C8 CLR 1409 A 1 HETATM 9 C C9 CLR . . . K 5 -65.855 40.801 -0.52 1 89.49 ? C9 CLR 1409 A 1 HETATM 10 C C10 CLR . . . K 5 -67.396 40.679 -0.598 1 87.7 ? C10 CLR 1409 A 1 HETATM 11 C C11 CLR . . . K 5 -65.24 39.957 0.626 1 89.03 ? C11 CLR 1409 A 1 HETATM 12 C C12 CLR . . . K 5 -63.717 40.074 0.7 1 89.28 ? C12 CLR 1409 A 1 HETATM 13 C C13 CLR . . . K 5 -63.055 39.748 -0.625 1 88.59 ? C13 CLR 1409 A 1 HETATM 14 C C14 CLR . . . K 5 -63.655 40.685 -1.658 1 88.81 ? C14 CLR 1409 A 1 HETATM 15 C C15 CLR . . . K 5 -62.767 40.518 -2.877 1 82.99 ? C15 CLR 1409 A 1 HETATM 16 C C16 CLR . . . K 5 -61.385 40.343 -2.244 1 92.18 ? C16 CLR 1409 A 1 HETATM 17 C C17 CLR . . . K 5 -61.578 40.066 -0.733 1 92.98 ? C17 CLR 1409 A 1 HETATM 18 C C18 CLR . . . K 5 -63.282 38.28 -1.024 1 82.53 ? C18 CLR 1409 A 1 HETATM 19 C C19 CLR . . . K 5 -67.855 39.221 -0.65 1 85.78 ? C19 CLR 1409 A 1 HETATM 20 C C20 CLR . . . K 5 -60.549 39.035 -0.196 1 92.96 ? C20 CLR 1409 A 1 HETATM 21 C C21 CLR . . . K 5 -60.881 38.387 1.145 1 81.96 ? C21 CLR 1409 A 1 HETATM 22 C C22 CLR . . . K 5 -59.175 39.703 -0.066 1 84.66 ? C22 CLR 1409 A 1 HETATM 23 C C23 CLR . . . K 5 -58.029 38.801 -0.522 1 85.03 ? C23 CLR 1409 A 1 HETATM 24 C C24 CLR . . . K 5 -56.728 39.602 -0.604 1 89.05 ? C24 CLR 1409 A 1 HETATM 25 C C25 CLR . . . K 5 -55.566 38.905 0.082 1 83.46 ? C25 CLR 1409 A 1 HETATM 26 C C26 CLR . . . K 5 -54.242 39.445 -0.445 1 86.96 ? C26 CLR 1409 A 1 HETATM 27 C C27 CLR . . . K 5 -55.668 39.062 1.595 1 85.38 ? C27 CLR 1409 A 1 HETATM 28 O O1 CLR . . . K 5 -71.057 43.01 -0.959 1 72.84 ? O1 CLR 1409 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 247 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 28 #