data_7BU7 # _model_server_result.job_id ymvp6TwaS2jjHj9B9uSQUA _model_server_result.datetime_utc '2025-02-26 15:00:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7bu7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":1414}' # _entry.id 7BU7 # _exptl.entry_id 7BU7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.331 _entity.id 10 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'HEXAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.883 _cell.angle_gamma 90 _cell.entry_id 7BU7 _cell.length_a 377.98 _cell.length_b 66.22 _cell.length_c 47.86 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7BU7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 10 _struct_asym.id P _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 3 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 3 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 GLC _pdbx_entity_branch_link.comp_id_2 GLC _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 3 n C GLC 1 C 1 GLC B 401 MAL 3 n C GLC 2 C 2 GLC B 401 MAL 3 n D GLC 1 D 1 GLC B 402 MAL 3 n D GLC 2 D 2 GLC B 402 MAL # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 248 A CYS 1131 1_555 A SG CYS 333 A CYS 1216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 A SG CYS 326 A CYS 1209 1_555 A SG CYS 332 A CYS 1215 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf3 B SG CYS 22 B CYS 22 1_555 B SG CYS 95 B CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? covale ? covale1 C O4 GLC . C GLC 1 1_555 C C1 GLC . C GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 sing covale ? covale2 D O4 GLC . D GLC 1 1_555 D C1 GLC . D GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.354 sing metalc ? metalc1 A O CYS 326 A CYS 1209 1_555 M NA NA . A NA 1411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? metalc ? metalc2 A O ASP 329 A ASP 1212 1_555 M NA NA . A NA 1411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.478 ? metalc ? metalc3 A O CYS 332 A CYS 1215 1_555 M NA NA . A NA 1411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.985 ? # _chem_comp.formula 'C12 H26 O7' _chem_comp.formula_weight 282.331 _chem_comp.id P6G _chem_comp.mon_nstd_flag . _chem_comp.name 'HEXAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'POLYETHYLENE GLYCOL PEG400' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 P6G sing 478 n n O1 H1 P6G sing 479 n n C2 C3 P6G sing 480 n n C2 H21 P6G sing 481 n n C2 H22 P6G sing 482 n n C3 O4 P6G sing 483 n n C3 H31 P6G sing 484 n n C3 H32 P6G sing 485 n n O4 C5 P6G sing 486 n n C5 C6 P6G sing 487 n n C5 H51 P6G sing 488 n n C5 H52 P6G sing 489 n n C6 O7 P6G sing 490 n n C6 H61 P6G sing 491 n n C6 H62 P6G sing 492 n n O7 C8 P6G sing 493 n n C8 C9 P6G sing 494 n n C8 H81 P6G sing 495 n n C8 H82 P6G sing 496 n n C9 O10 P6G sing 497 n n C9 H91 P6G sing 498 n n C9 H92 P6G sing 499 n n O10 C11 P6G sing 500 n n C11 C12 P6G sing 501 n n C11 H111 P6G sing 502 n n C11 H112 P6G sing 503 n n C12 O13 P6G sing 504 n n C12 H121 P6G sing 505 n n C12 H122 P6G sing 506 n n O13 C14 P6G sing 507 n n C14 C15 P6G sing 508 n n C14 H141 P6G sing 509 n n C14 H142 P6G sing 510 n n C15 O16 P6G sing 511 n n C15 H151 P6G sing 512 n n C15 H152 P6G sing 513 n n O16 C17 P6G sing 514 n n C17 C18 P6G sing 515 n n C17 H171 P6G sing 516 n n C17 H172 P6G sing 517 n n C18 O19 P6G sing 518 n n C18 H181 P6G sing 519 n n C18 H182 P6G sing 520 n n O19 H19 P6G sing 521 n n # _atom_sites.entry_id 7BU7 _atom_sites.fract_transf_matrix[1][1] 0.002646 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00018 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015101 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020942 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 SO4 A 1 1403 1 SO4 SO4 . F 4 SO4 A 1 1404 2 SO4 SO4 . G 4 SO4 A 1 1405 3 SO4 SO4 . H 4 SO4 A 1 1406 4 SO4 SO4 . I 4 SO4 A 1 1407 5 SO4 SO4 . J 4 SO4 A 1 1408 8 SO4 SO4 . K 5 CLR A 1 1409 413 CLR CLR . L 6 1WV A 1 1410 1404 1WV 1WV . M 7 NA A 1 1411 1 NA NA . N 8 EPE A 1 1412 1 EPE EPE . O 9 P0G A 1 1413 1401 P0G P0G . P 10 P6G A 1 1414 2002 P6G P6G . Q 11 HOH A 1 1501 39 HOH HOH . Q 11 HOH A 2 1502 20 HOH HOH . Q 11 HOH A 3 1503 5 HOH HOH . Q 11 HOH A 4 1504 28 HOH HOH . Q 11 HOH A 5 1505 6 HOH HOH . Q 11 HOH A 6 1506 9 HOH HOH . Q 11 HOH A 7 1507 3 HOH HOH . Q 11 HOH A 8 1508 16 HOH HOH . Q 11 HOH A 9 1509 4 HOH HOH . Q 11 HOH A 10 1510 11 HOH HOH . Q 11 HOH A 11 1511 1 HOH HOH . Q 11 HOH A 12 1512 22 HOH HOH . Q 11 HOH A 13 1513 17 HOH HOH . Q 11 HOH A 14 1514 18 HOH HOH . Q 11 HOH A 15 1515 23 HOH HOH . Q 11 HOH A 16 1516 2 HOH HOH . Q 11 HOH A 17 1517 37 HOH HOH . Q 11 HOH A 18 1518 8 HOH HOH . Q 11 HOH A 19 1519 15 HOH HOH . Q 11 HOH A 20 1520 35 HOH HOH . Q 11 HOH A 21 1521 13 HOH HOH . Q 11 HOH A 22 1522 12 HOH HOH . Q 11 HOH A 23 1523 24 HOH HOH . Q 11 HOH A 24 1524 36 HOH HOH . Q 11 HOH A 25 1525 38 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 P6G . . . P 10 -78.852 -5.349 -10.367 1 89.21 ? O1 P6G 1414 A 1 HETATM 2 C C2 P6G . . . P 10 -79.482 -6.29 -9.567 1 97.4 ? C2 P6G 1414 A 1 HETATM 3 C C3 P6G . . . P 10 -80.952 -5.979 -9.668 1 94.95 ? C3 P6G 1414 A 1 HETATM 4 O O4 P6G . . . P 10 -80.963 -4.627 -9.937 1 99.59 ? O4 P6G 1414 A 1 HETATM 5 C C5 P6G . . . P 10 -81.185 -4.323 -11.262 1 88.23 ? C5 P6G 1414 A 1 HETATM 6 C C6 P6G . . . P 10 -82.531 -3.673 -11.409 1 71.65 ? C6 P6G 1414 A 1 HETATM 7 O O7 P6G . . . P 10 -82.944 -3.076 -10.237 1 74.91 ? O7 P6G 1414 A 1 HETATM 8 C C8 P6G . . . P 10 -82.115 -2.085 -9.761 1 83.03 ? C8 P6G 1414 A 1 HETATM 9 C C9 P6G . . . P 10 -82.906 -0.988 -9.1 1 67.95 ? C9 P6G 1414 A 1 HETATM 10 O O10 P6G . . . P 10 -82.529 -1.054 -7.786 1 71.72 ? O10 P6G 1414 A 1 HETATM 11 C C11 P6G . . . P 10 -81.996 0.08 -7.228 1 72.85 ? C11 P6G 1414 A 1 HETATM 12 C C12 P6G . . . P 10 -80.502 -0.006 -7.393 1 76.89 ? C12 P6G 1414 A 1 HETATM 13 O O13 P6G . . . P 10 -79.879 -0.02 -6.154 1 88.02 ? O13 P6G 1414 A 1 HETATM 14 C C14 P6G . . . P 10 -78.787 -0.866 -6.054 1 88.34 ? C14 P6G 1414 A 1 HETATM 15 C C15 P6G . . . P 10 -77.686 -0.349 -6.953 1 81.14 ? C15 P6G 1414 A 1 HETATM 16 O O16 P6G . . . P 10 -78.018 -0.531 -8.286 1 85.27 ? O16 P6G 1414 A 1 HETATM 17 C C17 P6G . . . P 10 -77.987 -1.844 -8.719 1 97.25 ? C17 P6G 1414 A 1 HETATM 18 C C18 P6G . . . P 10 -79.131 -2.015 -9.705 1 93.41 ? C18 P6G 1414 A 1 HETATM 19 O O19 P6G . . . P 10 -79.755 -0.796 -9.862 1 81.19 ? O19 P6G 1414 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 109 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 1377 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 19 #