data_7BVQ # _model_server_result.job_id lgeuQvjEg6krAICV06OaaQ _model_server_result.datetime_utc '2024-11-18 20:45:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7bvq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":1407}' # _entry.id 7BVQ # _exptl.entry_id 7BVQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 92.137 _cell.angle_beta 90.714 _cell.angle_gamma 116.647 _cell.entry_id 7BVQ _cell.length_a 52.134 _cell.length_b 52.825 _cell.length_c 142.749 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7BVQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall 'P 1' _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,X 1 1 B,C,S,T,U,V,W,Y 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 G N N ? 5 H N N ? 5 I N N ? 5 J N N ? 5 K N N ? 5 T N N ? 5 U N N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 GLC _pdbx_entity_branch_link.comp_id_2 GLC _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n C GLC 1 C 1 GLC D 1202 MAL 2 n C GLC 2 C 2 GLC D 1202 MAL # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 248 A CYS 1131 1_555 A SG CYS 333 A CYS 1216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf2 A SG CYS 326 A CYS 1209 1_555 A SG CYS 332 A CYS 1215 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? disulf ? disulf3 B SG CYS 248 B CYS 1131 1_555 B SG CYS 333 B CYS 1216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf4 B SG CYS 326 B CYS 1209 1_555 B SG CYS 332 B CYS 1215 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? covale ? covale1 C O4 GLC . C GLC 1 1_555 C C1 GLC . C GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.368 sing metalc ? metalc1 A O CYS 326 A CYS 1209 1_555 M NA NA . A NA 1410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.528 ? metalc ? metalc2 A O ASP 329 A ASP 1212 1_555 M NA NA . A NA 1410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.762 ? metalc ? metalc3 A O CYS 332 A CYS 1215 1_555 M NA NA . A NA 1410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 539 n n S O2 SO4 doub 540 n n S O3 SO4 sing 541 n n S O4 SO4 sing 542 n n # _atom_sites.entry_id 7BVQ _atom_sites.fract_transf_matrix[1][1] 0.019181 _atom_sites.fract_transf_matrix[1][2] 0.009625 _atom_sites.fract_transf_matrix[1][3] 0.000702 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02118 _atom_sites.fract_transf_matrix[2][3] 0.001017 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007014 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 CLR A 1 1401 412 CLR CLR . E 4 CAU A 1 1402 5 CAU CAU . F 5 SO4 A 1 1403 1 SO4 SO4 . G 5 SO4 A 1 1404 2 SO4 SO4 . H 5 SO4 A 1 1405 6 SO4 SO4 . I 5 SO4 A 1 1406 7 SO4 SO4 . J 5 SO4 A 1 1407 8 SO4 SO4 . K 5 SO4 A 1 1408 9 SO4 SO4 . L 6 1WV A 1 1409 1403 1WV 1WV . M 7 NA A 1 1410 1 NA NA . N 8 CIT A 1 1411 1 CIT CIT . O 8 CIT A 1 1412 2 CIT CIT . P 9 PG4 A 1 1413 1 PG4 PG4 . Q 9 PG4 A 1 1414 2 PG4 PG4 . R 9 PG4 A 1 1415 5 PG4 PG4 . S 4 CAU B 1 1401 6 CAU CAU . T 5 SO4 B 1 1403 3 SO4 SO4 . U 5 SO4 B 1 1404 4 SO4 SO4 . V 6 1WV B 1 1405 1404 1WV 1WV . W 9 PG4 B 1 1406 3 PG4 PG4 . X 10 HOH A 1 1501 176 HOH HOH . X 10 HOH A 2 1502 35 HOH HOH . X 10 HOH A 3 1503 45 HOH HOH . X 10 HOH A 4 1504 133 HOH HOH . X 10 HOH A 5 1505 121 HOH HOH . X 10 HOH A 6 1506 26 HOH HOH . X 10 HOH A 7 1507 34 HOH HOH . X 10 HOH A 8 1508 17 HOH HOH . X 10 HOH A 9 1509 54 HOH HOH . X 10 HOH A 10 1510 8 HOH HOH . X 10 HOH A 11 1511 138 HOH HOH . X 10 HOH A 12 1512 30 HOH HOH . X 10 HOH A 13 1513 173 HOH HOH . X 10 HOH A 14 1514 114 HOH HOH . X 10 HOH A 15 1515 50 HOH HOH . X 10 HOH A 16 1516 122 HOH HOH . X 10 HOH A 17 1517 83 HOH HOH . X 10 HOH A 18 1518 84 HOH HOH . X 10 HOH A 19 1519 134 HOH HOH . X 10 HOH A 20 1520 163 HOH HOH . X 10 HOH A 21 1521 95 HOH HOH . X 10 HOH A 22 1522 77 HOH HOH . X 10 HOH A 23 1523 36 HOH HOH . X 10 HOH A 24 1524 75 HOH HOH . X 10 HOH A 25 1525 82 HOH HOH . X 10 HOH A 26 1526 28 HOH HOH . X 10 HOH A 27 1527 169 HOH HOH . X 10 HOH A 28 1528 72 HOH HOH . X 10 HOH A 29 1529 38 HOH HOH . X 10 HOH A 30 1530 172 HOH HOH . X 10 HOH A 31 1531 111 HOH HOH . X 10 HOH A 32 1532 6 HOH HOH . X 10 HOH A 33 1533 60 HOH HOH . X 10 HOH A 34 1534 123 HOH HOH . X 10 HOH A 35 1535 47 HOH HOH . X 10 HOH A 36 1536 79 HOH HOH . X 10 HOH A 37 1537 14 HOH HOH . X 10 HOH A 38 1538 180 HOH HOH . X 10 HOH A 39 1539 74 HOH HOH . X 10 HOH A 40 1540 81 HOH HOH . X 10 HOH A 41 1541 58 HOH HOH . X 10 HOH A 42 1542 165 HOH HOH . X 10 HOH A 43 1543 87 HOH HOH . X 10 HOH A 44 1544 86 HOH HOH . X 10 HOH A 45 1545 46 HOH HOH . X 10 HOH A 46 1546 44 HOH HOH . X 10 HOH A 47 1547 62 HOH HOH . X 10 HOH A 48 1548 33 HOH HOH . X 10 HOH A 49 1549 78 HOH HOH . X 10 HOH A 50 1550 179 HOH HOH . X 10 HOH A 51 1551 162 HOH HOH . X 10 HOH A 52 1552 65 HOH HOH . X 10 HOH A 53 1553 18 HOH HOH . X 10 HOH A 54 1554 4 HOH HOH . X 10 HOH A 55 1555 11 HOH HOH . X 10 HOH A 56 1556 154 HOH HOH . X 10 HOH A 57 1557 167 HOH HOH . X 10 HOH A 58 1558 89 HOH HOH . X 10 HOH A 59 1559 70 HOH HOH . X 10 HOH A 60 1560 140 HOH HOH . X 10 HOH A 61 1561 177 HOH HOH . X 10 HOH A 62 1562 102 HOH HOH . X 10 HOH A 63 1563 2 HOH HOH . X 10 HOH A 64 1564 19 HOH HOH . X 10 HOH A 65 1565 9 HOH HOH . X 10 HOH A 66 1566 41 HOH HOH . X 10 HOH A 67 1567 168 HOH HOH . X 10 HOH A 68 1568 88 HOH HOH . X 10 HOH A 69 1569 117 HOH HOH . X 10 HOH A 70 1570 67 HOH HOH . X 10 HOH A 71 1571 131 HOH HOH . X 10 HOH A 72 1572 43 HOH HOH . X 10 HOH A 73 1573 148 HOH HOH . X 10 HOH A 74 1574 146 HOH HOH . X 10 HOH A 75 1575 144 HOH HOH . X 10 HOH A 76 1576 174 HOH HOH . X 10 HOH A 77 1577 16 HOH HOH . X 10 HOH A 78 1578 119 HOH HOH . X 10 HOH A 79 1579 66 HOH HOH . X 10 HOH A 80 1580 127 HOH HOH . X 10 HOH A 81 1581 68 HOH HOH . X 10 HOH A 82 1582 61 HOH HOH . X 10 HOH A 83 1583 120 HOH HOH . X 10 HOH A 84 1584 155 HOH HOH . X 10 HOH A 85 1585 125 HOH HOH . X 10 HOH A 86 1586 64 HOH HOH . X 10 HOH A 87 1587 150 HOH HOH . X 10 HOH A 88 1588 69 HOH HOH . X 10 HOH A 89 1589 57 HOH HOH . X 10 HOH A 90 1590 130 HOH HOH . Y 10 HOH B 1 1501 48 HOH HOH . Y 10 HOH B 2 1502 115 HOH HOH . Y 10 HOH B 3 1503 106 HOH HOH . Y 10 HOH B 4 1504 108 HOH HOH . Y 10 HOH B 5 1505 141 HOH HOH . Y 10 HOH B 6 1506 13 HOH HOH . Y 10 HOH B 7 1507 91 HOH HOH . Y 10 HOH B 8 1508 164 HOH HOH . Y 10 HOH B 9 1509 99 HOH HOH . Y 10 HOH B 10 1510 31 HOH HOH . Y 10 HOH B 11 1511 24 HOH HOH . Y 10 HOH B 12 1512 93 HOH HOH . Y 10 HOH B 13 1513 27 HOH HOH . Y 10 HOH B 14 1514 22 HOH HOH . Y 10 HOH B 15 1515 100 HOH HOH . Y 10 HOH B 16 1516 170 HOH HOH . Y 10 HOH B 17 1517 25 HOH HOH . Y 10 HOH B 18 1518 142 HOH HOH . Y 10 HOH B 19 1519 132 HOH HOH . Y 10 HOH B 20 1520 80 HOH HOH . Y 10 HOH B 21 1521 104 HOH HOH . Y 10 HOH B 22 1522 118 HOH HOH . Y 10 HOH B 23 1523 52 HOH HOH . Y 10 HOH B 24 1524 1 HOH HOH . Y 10 HOH B 25 1525 15 HOH HOH . Y 10 HOH B 26 1526 32 HOH HOH . Y 10 HOH B 27 1527 166 HOH HOH . Y 10 HOH B 28 1528 145 HOH HOH . Y 10 HOH B 29 1529 151 HOH HOH . Y 10 HOH B 30 1530 110 HOH HOH . Y 10 HOH B 31 1531 39 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . J 5 32.861 -52.096 -13.243 1 79.74 ? S SO4 1407 A 1 HETATM 2 O O1 SO4 . . . J 5 34.178 -52.043 -13.85 1 61.82 ? O1 SO4 1407 A 1 HETATM 3 O O2 SO4 . . . J 5 31.852 -52.206 -14.291 1 69.31 ? O2 SO4 1407 A 1 HETATM 4 O O3 SO4 . . . J 5 32.796 -53.263 -12.365 1 93.64 -1 O3 SO4 1407 A 1 HETATM 5 O O4 SO4 . . . J 5 32.642 -50.875 -12.468 1 81.59 ? O4 SO4 1407 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #