data_7BW1
#
_model_server_result.job_id            euWcitlav-_ad6GypFM68w 
_model_server_result.datetime_utc      '2024-11-05 09:33:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7bw1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":602}' 
#
_entry.id    7BW1 
#
_exptl.entry_id    7BW1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              1117.965 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '[[(2~{R},3~{S},4~{R},5~{R})-5-[4-[(1~{S},3~{a}~{S},3~{b}~{S},5~{a}~{R},8~{S},9~{a}~{R},9~{b}~{S},11~{a}~{S})-1-(~{tert}-butylcarbamoyl)-9~{a},11~{a}-dimethyl-7-oxidanylidene-1,2,3,3~{a},3~{b},4,5,5~{a},6,8,9,9~{b},10,11-tetradecahydroindeno[5,4-f]quinolin-8-yl]-3-aminocarbonyl-4~{H}-pyridin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{R},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3-oxidanyl-4-phosphonooxy-oxolan-2-yl]methyl hydrogen phosphate' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7BW1 
_cell.length_a            107.449 
_cell.length_b            107.449 
_cell.length_c            103.372 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7BW1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        177 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 6 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   disulf 
_struct_conn.details                        ? 
_struct_conn.id                             disulf1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             9 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              5 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            A 
_struct_conn.ptnr2_label_atom_id            SG 
_struct_conn.ptnr2_label_comp_id            CYS 
_struct_conn.ptnr2_label_seq_id             137 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             CYS 
_struct_conn.ptnr2_auth_seq_id              133 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.033 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C44 H66 N9 O19 P3' 
_chem_comp.formula_weight    1117.965 
_chem_comp.id                NDX 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '[[(2~{R},3~{S},4~{R},5~{R})-5-[4-[(1~{S},3~{a}~{S},3~{b}~{S},5~{a}~{R},8~{S},9~{a}~{R},9~{b}~{S},11~{a}~{S})-1-(~{tert}-butylcarbamoyl)-9~{a},11~{a}-dimethyl-7-oxidanylidene-1,2,3,3~{a},3~{b},4,5,5~{a},6,8,9,9~{b},10,11-tetradecahydroindeno[5,4-f]quinolin-8-yl]-3-aminocarbonyl-4~{H}-pyridin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{R},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3-oxidanyl-4-phosphonooxy-oxolan-2-yl]methyl hydrogen phosphate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     7BW1 
_atom_sites.fract_transf_matrix[1][1]    0.009307 
_atom_sites.fract_transf_matrix[1][2]    0.005373 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010746 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009674 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 OLC A 1 601 601 OLC OLC . 
C 3 NDX A 1 602 701 NDX NDX . 
D 4 SO4 A 1 603 1 SO4 SO4 . 
E 4 SO4 A 1 604 2 SO4 SO4 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 NDX . . . C 3 -27.785 16.152 31.548 1 57.89 ? N1 NDX 602 A 1 
HETATM 2 C C2 NDX . . . C 3 -28.405 13.822 31.332 1 58.25 ? C2 NDX 602 A 1 
HETATM 3 N N2 NDX . . . C 3 -20.881 11.228 36.273 1 67.67 ? N2 NDX 602 A 1 
HETATM 4 C C4 NDX . . . C 3 -26.887 15.812 32.654 1 55.44 ? C4 NDX 602 A 1 
HETATM 5 C C5 NDX . . . C 3 -25.909 16.94 32.971 1 54.83 ? C5 NDX 602 A 1 
HETATM 6 C C6 NDX . . . C 3 -24.964 16.549 34.105 1 53.37 ? C6 NDX 602 A 1 
HETATM 7 O O1 NDX . . . C 3 -29.369 15.568 30.071 1 64.29 ? O1 NDX 602 A 1 
HETATM 8 O O2 NDX . . . C 3 -19.387 12.852 35.765 1 69.27 ? O2 NDX 602 A 1 
HETATM 9 C C1 NDX . . . C 3 -27.175 13.428 32.066 1 57.15 ? C1 NDX 602 A 1 
HETATM 10 C C3 NDX . . . C 3 -28.567 15.242 30.944 1 60.33 ? C3 NDX 602 A 1 
HETATM 11 C C7 NDX . . . C 3 -24.209 15.259 33.801 1 53.11 ? C7 NDX 602 A 1 
HETATM 12 C C8 NDX . . . C 3 -25.196 14.116 33.48 1 50.85 ? C8 NDX 602 A 1 
HETATM 13 C C9 NDX . . . C 3 -26.139 14.503 32.292 1 56.62 ? C9 NDX 602 A 1 
HETATM 14 C C10 NDX . . . C 3 -24.469 12.771 33.313 1 50.25 ? C10 NDX 602 A 1 
HETATM 15 C C11 NDX . . . C 3 -23.521 12.442 34.473 1 49.38 ? C11 NDX 602 A 1 
HETATM 16 C C12 NDX . . . C 3 -22.503 13.553 34.696 1 51.73 ? C12 NDX 602 A 1 
HETATM 17 C C13 NDX . . . C 3 -23.308 14.84 34.954 1 52.36 ? C13 NDX 602 A 1 
HETATM 18 C C14 NDX . . . C 3 -22.275 15.836 35.49 1 55.93 ? C14 NDX 602 A 1 
HETATM 19 C C15 NDX . . . C 3 -21.257 14.963 36.255 1 60.35 ? C15 NDX 602 A 1 
HETATM 20 C C16 NDX . . . C 3 -21.682 13.492 36.017 1 63.06 ? C16 NDX 602 A 1 
HETATM 21 C C17 NDX . . . C 3 -21.562 13.684 33.488 1 51.06 ? C17 NDX 602 A 1 
HETATM 22 C C18 NDX . . . C 3 -25.369 14.667 30.961 1 56.21 ? C18 NDX 602 A 1 
HETATM 23 C C19 NDX . . . C 3 -20.538 12.495 36.018 1 66.49 ? C19 NDX 602 A 1 
HETATM 24 C C20 NDX . . . C 3 -20.008 10.038 36.135 1 67.57 ? C20 NDX 602 A 1 
HETATM 25 C C21 NDX . . . C 3 -20.809 8.808 36.537 1 66.99 ? C21 NDX 602 A 1 
HETATM 26 C C22 NDX . . . C 3 -18.794 10.178 37.043 1 68.87 ? C22 NDX 602 A 1 
HETATM 27 C C23 NDX . . . C 3 -19.569 9.919 34.682 1 68.78 ? C23 NDX 602 A 1 
HETATM 28 O O3X NDX . . . C 3 -33.45 21.065 43.817 1 49.95 ? O3X NDX 602 A 1 
HETATM 29 P P2B NDX . . . C 3 -33.703 20.07 42.702 1 50.47 ? P2B NDX 602 A 1 
HETATM 30 O O1X NDX . . . C 3 -33.665 18.633 43.19 1 54.63 ? O1X NDX 602 A 1 
HETATM 31 O O2X NDX . . . C 3 -32.787 20.295 41.51 1 51.99 ? O2X NDX 602 A 1 
HETATM 32 O O2B NDX . . . C 3 -35.232 20.371 42.279 1 42.52 ? O2B NDX 602 A 1 
HETATM 33 C C2B NDX . . . C 3 -35.705 19.518 41.237 1 44.96 ? C2B NDX 602 A 1 
HETATM 34 C C1B NDX . . . C 3 -37.228 19.466 41.218 1 45.15 ? C1B NDX 602 A 1 
HETATM 35 N N9A NDX . . . C 3 -37.777 18.454 42.109 1 44.78 ? N9A NDX 602 A 1 
HETATM 36 C C4A NDX . . . C 3 -38.655 18.619 43.158 1 45.7 ? C4A NDX 602 A 1 
HETATM 37 N N3A NDX . . . C 3 -39.18 19.762 43.622 1 45.16 ? N3A NDX 602 A 1 
HETATM 38 C C2A NDX . . . C 3 -39.982 19.529 44.659 1 44.32 ? C2A NDX 602 A 1 
HETATM 39 N N1A NDX . . . C 3 -40.299 18.368 45.246 1 45.68 ? N1A NDX 602 A 1 
HETATM 40 C C6A NDX . . . C 3 -39.754 17.231 44.758 1 45.21 ? C6A NDX 602 A 1 
HETATM 41 N N6A NDX . . . C 3 -40.061 16.07 45.333 1 44.17 ? N6A NDX 602 A 1 
HETATM 42 C C5A NDX . . . C 3 -38.884 17.35 43.656 1 45.14 ? C5A NDX 602 A 1 
HETATM 43 N N7A NDX . . . C 3 -38.173 16.411 42.924 1 45.54 ? N7A NDX 602 A 1 
HETATM 44 C C8A NDX . . . C 3 -37.539 17.108 42.018 1 43.57 ? C8A NDX 602 A 1 
HETATM 45 O O4B NDX . . . C 3 -37.583 19.093 39.907 1 44.61 ? O4B NDX 602 A 1 
HETATM 46 C C3B NDX . . . C 3 -35.383 20.002 39.825 1 44.99 ? C3B NDX 602 A 1 
HETATM 47 O O3B NDX . . . C 3 -35.488 21.415 39.718 1 45.82 ? O3B NDX 602 A 1 
HETATM 48 C C4B NDX . . . C 3 -36.484 19.334 38.989 1 44.57 ? C4B NDX 602 A 1 
HETATM 49 C C5B NDX . . . C 3 -36.113 18.028 38.33 1 45.05 ? C5B NDX 602 A 1 
HETATM 50 O O5B NDX . . . C 3 -35.428 17.184 39.285 1 47.34 ? O5B NDX 602 A 1 
HETATM 51 P PA NDX . . . C 3 -35.163 15.653 38.901 1 48.9 ? PA NDX 602 A 1 
HETATM 52 O O1A NDX . . . C 3 -34.187 15.055 39.857 1 57.94 ? O1A NDX 602 A 1 
HETATM 53 O O2A NDX . . . C 3 -36.475 14.963 38.73 1 46.88 ? O2A NDX 602 A 1 
HETATM 54 O O3 NDX . . . C 3 -34.465 15.81 37.467 1 63.29 ? O3 NDX 602 A 1 
HETATM 55 P PN NDX . . . C 3 -33.044 16.333 36.948 1 45.71 ? PN NDX 602 A 1 
HETATM 56 O O1N NDX . . . C 3 -31.989 15.347 37.324 1 45.24 ? O1N NDX 602 A 1 
HETATM 57 O O2N NDX . . . C 3 -32.866 17.747 37.383 1 46.32 ? O2N NDX 602 A 1 
HETATM 58 O O5D NDX . . . C 3 -33.291 16.292 35.366 1 55.92 ? O5D NDX 602 A 1 
HETATM 59 C C5D NDX . . . C 3 -34.231 17.243 34.815 1 55.21 ? C5D NDX 602 A 1 
HETATM 60 C C4D NDX . . . C 3 -34.634 16.815 33.426 1 54.21 ? C4D NDX 602 A 1 
HETATM 61 C C3D NDX . . . C 3 -35.546 15.584 33.334 1 53.19 ? C3D NDX 602 A 1 
HETATM 62 O O3D NDX . . . C 3 -36.421 15.697 32.22 1 53.37 ? O3D NDX 602 A 1 
HETATM 63 C C2D NDX . . . C 3 -34.516 14.494 33.076 1 51.85 ? C2D NDX 602 A 1 
HETATM 64 O O2D NDX . . . C 3 -35.065 13.298 32.549 1 52.8 ? O2D NDX 602 A 1 
HETATM 65 C C1D NDX . . . C 3 -33.591 15.203 32.094 1 52.2 ? C1D NDX 602 A 1 
HETATM 66 O O4D NDX . . . C 3 -33.437 16.471 32.682 1 53.66 ? O4D NDX 602 A 1 
HETATM 67 N N1N NDX . . . C 3 -32.247 14.561 32.032 1 54.29 ? N1N NDX 602 A 1 
HETATM 68 C C6N NDX . . . C 3 -31.294 14.871 32.979 1 55.9 ? C6N NDX 602 A 1 
HETATM 69 C C5N NDX . . . C 3 -30.096 14.329 32.972 1 55.49 ? C5N NDX 602 A 1 
HETATM 70 C C4N NDX . . . C 3 -29.692 13.354 31.949 1 55.91 ? C4N NDX 602 A 1 
HETATM 71 C C3N NDX . . . C 3 -30.751 13.025 30.948 1 56.11 ? C3N NDX 602 A 1 
HETATM 72 C C2N NDX . . . C 3 -31.962 13.653 31.049 1 55.22 ? C2N NDX 602 A 1 
HETATM 73 C C7N NDX . . . C 3 -30.583 12.051 29.842 1 56.54 ? C7N NDX 602 A 1 
HETATM 74 O O7N NDX . . . C 3 -29.555 11.37 29.773 1 56.35 ? O7N NDX 602 A 1 
HETATM 75 N N7N NDX . . . C 3 -31.554 11.946 28.946 1 56.83 ? N7N NDX 602 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           274 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           75 
#