data_7BWL # _model_server_result.job_id aZCtSiUjiBryuSXA_ncGAg _model_server_result.datetime_utc '2024-11-24 06:05:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7bwl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 7BWL # _exptl.entry_id 7BWL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 727.109 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Ubiquinone-8 _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7BWL _cell.length_a 53.338 _cell.length_b 53.338 _cell.length_c 134.639 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7BWL _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C49 H74 O4' _chem_comp.formula_weight 727.109 _chem_comp.id UQ8 _chem_comp.mon_nstd_flag . _chem_comp.name Ubiquinone-8 _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '2,3-dimethoxy-5-methyl-6-[(6E,10E,14E,18E,22E,26E)-3,7,11,15,19,23,27,31-octamethyldotriaconta-2,6,10,14,18,22,26,30-oc taen-1-yl]cyclohexa-2,5-diene-1,4-dione' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C45 C44 UQ8 sing 345 n n C45 H45 UQ8 sing 346 n n C45 H45A UQ8 sing 347 n n C45 H45B UQ8 sing 348 n n C43 C44 UQ8 doub 349 n n C44 C46 UQ8 sing 350 n n C46 H46 UQ8 sing 351 n n C46 H46A UQ8 sing 352 n n C46 H46B UQ8 sing 353 n n C42 C43 UQ8 sing 354 n n C43 H43 UQ8 sing 355 n n C41 C42 UQ8 sing 356 n n C42 H42 UQ8 sing 357 n n C42 H42A UQ8 sing 358 n n C39 C41 UQ8 sing 359 n n C41 H41 UQ8 sing 360 n n C41 H41A UQ8 sing 361 n n C40 C39 UQ8 sing 362 n n C38 C39 UQ8 doub 363 n n C40 H40 UQ8 sing 364 n n C40 H40A UQ8 sing 365 n n C40 H40B UQ8 sing 366 e n C37 C38 UQ8 sing 367 n n C38 H38 UQ8 sing 368 n n C37 C36 UQ8 sing 369 n n C37 H37 UQ8 sing 370 n n C37 H37A UQ8 sing 371 n n C34 C36 UQ8 sing 372 n n C36 H36 UQ8 sing 373 n n C36 H36A UQ8 sing 374 n n C33 C34 UQ8 doub 375 n n C34 C35 UQ8 sing 376 n n C35 H35 UQ8 sing 377 n n C35 H35A UQ8 sing 378 n n C32 C33 UQ8 sing 379 e n C33 H33 UQ8 sing 380 n n C35 H35B UQ8 sing 381 n n C31 C32 UQ8 sing 382 n n C32 H32 UQ8 sing 383 n n C32 H32A UQ8 sing 384 n n C29 C31 UQ8 sing 385 n n C31 H31 UQ8 sing 386 n n C31 H31A UQ8 sing 387 n n C28 C29 UQ8 doub 388 n n C30 C29 UQ8 sing 389 n n C30 H30 UQ8 sing 390 n n C30 H30A UQ8 sing 391 n n C30 H30B UQ8 sing 392 e n C27 C28 UQ8 sing 393 n n C28 H28 UQ8 sing 394 n n C26 C27 UQ8 sing 395 n n C27 H27 UQ8 sing 396 n n C27 H27A UQ8 sing 397 n n C24 C26 UQ8 sing 398 n n C26 H26 UQ8 sing 399 n n C26 H26A UQ8 sing 400 n n C23 C24 UQ8 doub 401 n n C24 C25 UQ8 sing 402 n n C25 H25 UQ8 sing 403 n n C25 H25A UQ8 sing 404 n n C25 H25B UQ8 sing 405 e n C22 C23 UQ8 sing 406 n n C23 H23 UQ8 sing 407 n n C21 C22 UQ8 sing 408 n n C22 H22 UQ8 sing 409 n n C22 H22A UQ8 sing 410 n n C19 C21 UQ8 sing 411 n n C21 H21 UQ8 sing 412 n n C21 H21A UQ8 sing 413 n n C20 C19 UQ8 sing 414 n n C18 C19 UQ8 doub 415 n n C20 H20 UQ8 sing 416 n n C20 H20A UQ8 sing 417 n n C20 H20B UQ8 sing 418 e n C17 C18 UQ8 sing 419 n n C18 H18 UQ8 sing 420 n n C16 C17 UQ8 sing 421 n n C17 H17 UQ8 sing 422 n n C17 H17A UQ8 sing 423 n n C14 C16 UQ8 sing 424 n n C16 H16 UQ8 sing 425 n n C16 H16A UQ8 sing 426 n n C13 C14 UQ8 doub 427 n n C15 C14 UQ8 sing 428 n n C15 H15 UQ8 sing 429 n n C15 H15A UQ8 sing 430 n n C15 H15B UQ8 sing 431 e n C12 C13 UQ8 sing 432 n n C13 H13 UQ8 sing 433 n n C11 C12 UQ8 sing 434 n n C12 H12 UQ8 sing 435 n n C12 H12A UQ8 sing 436 n n C9 C11 UQ8 sing 437 n n C11 H11 UQ8 sing 438 n n C11 H11A UQ8 sing 439 n n C8 C9 UQ8 doub 440 n n C10 C9 UQ8 sing 441 n n C10 H10 UQ8 sing 442 n n C10 H10A UQ8 sing 443 n n C10 H10B UQ8 sing 444 e n C7 C8 UQ8 sing 445 n n C8 H8 UQ8 sing 446 n n C6 C7 UQ8 sing 447 n n C7 H7 UQ8 sing 448 n n C7 H7A UQ8 sing 449 n n C1 C6 UQ8 doub 450 n n C5 C6 UQ8 sing 451 n n C2 C1 UQ8 sing 452 n n C1 C1M UQ8 sing 453 n n C1M H1M UQ8 sing 454 n n C1M H1MA UQ8 sing 455 n n C1M H1MB UQ8 sing 456 n n O2 C2 UQ8 doub 457 n n C3 C2 UQ8 sing 458 n n O3 C3 UQ8 sing 459 n n C3 C4 UQ8 doub 460 n n C3M O3 UQ8 sing 461 n n C3M H3M UQ8 sing 462 n n C3M H3MA UQ8 sing 463 n n C3M H3MB UQ8 sing 464 n n O4 C4 UQ8 sing 465 n n C4 C5 UQ8 sing 466 n n C4M O4 UQ8 sing 467 n n C4M H4M UQ8 sing 468 n n C4M H4MA UQ8 sing 469 n n C4M H4MB UQ8 sing 470 n n C5 O5 UQ8 doub 471 n n # _atom_sites.entry_id 7BWL _atom_sites.fract_transf_matrix[1][1] 0.018748 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018748 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007427 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 UQ8 A 1 201 7575 UQ8 UQ8 . C 3 HOH A 1 301 3 HOH HOH . C 3 HOH A 2 302 38 HOH HOH . C 3 HOH A 3 303 22 HOH HOH . C 3 HOH A 4 304 13 HOH HOH . C 3 HOH A 5 305 35 HOH HOH . C 3 HOH A 6 306 16 HOH HOH . C 3 HOH A 7 307 9 HOH HOH . C 3 HOH A 8 308 20 HOH HOH . C 3 HOH A 9 309 1 HOH HOH . C 3 HOH A 10 310 4 HOH HOH . C 3 HOH A 11 311 18 HOH HOH . C 3 HOH A 12 312 36 HOH HOH . C 3 HOH A 13 313 33 HOH HOH . C 3 HOH A 14 314 34 HOH HOH . C 3 HOH A 15 315 24 HOH HOH . C 3 HOH A 16 316 23 HOH HOH . C 3 HOH A 17 317 42 HOH HOH . C 3 HOH A 18 318 14 HOH HOH . C 3 HOH A 19 319 7 HOH HOH . C 3 HOH A 20 320 31 HOH HOH . C 3 HOH A 21 321 37 HOH HOH . C 3 HOH A 22 322 21 HOH HOH . C 3 HOH A 23 323 27 HOH HOH . C 3 HOH A 24 324 32 HOH HOH . C 3 HOH A 25 325 11 HOH HOH . C 3 HOH A 26 326 46 HOH HOH . C 3 HOH A 27 327 8 HOH HOH . C 3 HOH A 28 328 28 HOH HOH . C 3 HOH A 29 329 5 HOH HOH . C 3 HOH A 30 330 40 HOH HOH . C 3 HOH A 31 331 41 HOH HOH . C 3 HOH A 32 332 2 HOH HOH . C 3 HOH A 33 333 25 HOH HOH . C 3 HOH A 34 334 15 HOH HOH . C 3 HOH A 35 335 43 HOH HOH . C 3 HOH A 36 336 26 HOH HOH . C 3 HOH A 37 337 6 HOH HOH . C 3 HOH A 38 338 48 HOH HOH . C 3 HOH A 39 339 39 HOH HOH . C 3 HOH A 40 340 44 HOH HOH . C 3 HOH A 41 341 17 HOH HOH . C 3 HOH A 42 342 29 HOH HOH . C 3 HOH A 43 343 45 HOH HOH . C 3 HOH A 44 344 10 HOH HOH . C 3 HOH A 45 345 19 HOH HOH . C 3 HOH A 46 346 50 HOH HOH . C 3 HOH A 47 347 47 HOH HOH . C 3 HOH A 48 348 30 HOH HOH . C 3 HOH A 49 349 51 HOH HOH . C 3 HOH A 50 350 49 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C45 UQ8 . . . B 2 25.008 -3.743 2.857 1 39.18 ? C45 UQ8 201 A 1 HETATM 2 C C44 UQ8 . . . B 2 24.36 -3.322 4.147 1 39.46 ? C44 UQ8 201 A 1 HETATM 3 C C46 UQ8 . . . B 2 25.23 -3.182 5.357 1 39.22 ? C46 UQ8 201 A 1 HETATM 4 C C43 UQ8 . . . B 2 23.037 -3.073 4.283 1 39.55 ? C43 UQ8 201 A 1 HETATM 5 C C42 UQ8 . . . B 2 21.984 -3.142 3.191 1 39.88 ? C42 UQ8 201 A 1 HETATM 6 C C41 UQ8 . . . B 2 21.307 -1.771 3.184 1 39.76 ? C41 UQ8 201 A 1 HETATM 7 C C39 UQ8 . . . B 2 20.246 -1.499 2.134 1 39.45 ? C39 UQ8 201 A 1 HETATM 8 C C40 UQ8 . . . B 2 19.937 -0.046 1.863 1 38.8 ? C40 UQ8 201 A 1 HETATM 9 C C38 UQ8 . . . B 2 19.596 -2.501 1.502 1 38.19 ? C38 UQ8 201 A 1 HETATM 10 C C37 UQ8 . . . B 2 18.518 -2.312 0.451 1 38.01 ? C37 UQ8 201 A 1 HETATM 11 C C36 UQ8 . . . B 2 18.093 -3.697 -0.036 1 37.33 ? C36 UQ8 201 A 1 HETATM 12 C C34 UQ8 . . . B 2 17.003 -3.662 -1.086 1 35.9 ? C34 UQ8 201 A 1 HETATM 13 C C35 UQ8 . . . B 2 15.567 -3.605 -0.632 1 36.84 ? C35 UQ8 201 A 1 HETATM 14 C C33 UQ8 . . . B 2 17.369 -3.72 -2.384 1 34.97 ? C33 UQ8 201 A 1 HETATM 15 C C32 UQ8 . . . B 2 16.44 -3.708 -3.577 1 33.95 ? C32 UQ8 201 A 1 HETATM 16 C C31 UQ8 . . . B 2 17.04 -2.776 -4.62 1 33.99 ? C31 UQ8 201 A 1 HETATM 17 C C29 UQ8 . . . B 2 16.266 -2.678 -5.916 1 35.15 ? C29 UQ8 201 A 1 HETATM 18 C C30 UQ8 . . . B 2 16.952 -1.992 -7.063 1 35.06 ? C30 UQ8 201 A 1 HETATM 19 C C28 UQ8 . . . B 2 15.012 -3.175 -6.032 1 35.58 ? C28 UQ8 201 A 1 HETATM 20 C C27 UQ8 . . . B 2 14.176 -3.117 -7.291 1 35.11 ? C27 UQ8 201 A 1 HETATM 21 C C26 UQ8 . . . B 2 12.716 -2.891 -6.908 1 34.06 ? C26 UQ8 201 A 1 HETATM 22 C C24 UQ8 . . . B 2 11.822 -3.097 -8.116 1 35.42 ? C24 UQ8 201 A 1 HETATM 23 C C25 UQ8 . . . B 2 11.309 -4.488 -8.414 1 34.94 ? C25 UQ8 201 A 1 HETATM 24 C C23 UQ8 . . . B 2 11.518 -2.013 -8.861 1 34.35 ? C23 UQ8 201 A 1 HETATM 25 C C22 UQ8 . . . B 2 10.648 -1.968 -10.094 1 34 ? C22 UQ8 201 A 1 HETATM 26 C C21 UQ8 . . . B 2 10.024 -0.569 -10.166 1 34.54 ? C21 UQ8 201 A 1 HETATM 27 C C19 UQ8 . . . B 2 8.972 -0.446 -11.246 1 34.8 ? C19 UQ8 201 A 1 HETATM 28 C C20 UQ8 . . . B 2 9.321 -0.806 -12.67 1 34.66 ? C20 UQ8 201 A 1 HETATM 29 C C18 UQ8 . . . B 2 7.746 -0.002 -10.893 1 36.18 ? C18 UQ8 201 A 1 HETATM 30 C C17 UQ8 . . . B 2 6.575 0.189 -11.847 1 37.92 ? C17 UQ8 201 A 1 HETATM 31 C C16 UQ8 . . . B 2 6.469 1.667 -12.228 1 40.87 ? C16 UQ8 201 A 1 HETATM 32 C C14 UQ8 . . . B 2 5.427 1.989 -13.288 1 43.01 ? C14 UQ8 201 A 1 HETATM 33 C C15 UQ8 . . . B 2 5.684 1.585 -14.716 1 42.46 ? C15 UQ8 201 A 1 HETATM 34 C C13 UQ8 . . . B 2 4.308 2.658 -12.928 1 45.96 ? C13 UQ8 201 A 1 HETATM 35 C C12 UQ8 . . . B 2 3.208 3.052 -13.898 1 52.14 ? C12 UQ8 201 A 1 HETATM 36 C C11 UQ8 . . . B 2 2.585 4.39 -13.501 1 57.3 ? C11 UQ8 201 A 1 HETATM 37 C C9 UQ8 . . . B 2 1.76 5.031 -14.606 1 61.42 ? C9 UQ8 201 A 1 HETATM 38 C C10 UQ8 . . . B 2 2.245 6.337 -15.181 1 60.71 ? C10 UQ8 201 A 1 HETATM 39 C C8 UQ8 . . . B 2 0.622 4.424 -15.023 1 64.46 ? C8 UQ8 201 A 1 HETATM 40 C C7 UQ8 . . . B 2 -0.339 4.897 -16.102 1 68.01 ? C7 UQ8 201 A 1 HETATM 41 C C6 UQ8 . . . B 2 -1.637 4.126 -15.903 1 70.32 ? C6 UQ8 201 A 1 HETATM 42 C C1 UQ8 . . . B 2 -1.938 2.874 -16.677 1 71.69 ? C1 UQ8 201 A 1 HETATM 43 C C1M UQ8 . . . B 2 -0.963 2.336 -17.706 1 71.34 ? C1M UQ8 201 A 1 HETATM 44 C C2 UQ8 . . . B 2 -3.227 2.149 -16.43 1 73.48 ? C2 UQ8 201 A 1 HETATM 45 O O2 UQ8 . . . B 2 -3.501 1.105 -17.067 1 75.19 ? O2 UQ8 201 A 1 HETATM 46 C C3 UQ8 . . . B 2 -4.208 2.66 -15.425 1 74.38 ? C3 UQ8 201 A 1 HETATM 47 O O3 UQ8 . . . B 2 -5.387 1.991 -15.196 1 75.76 ? O3 UQ8 201 A 1 HETATM 48 C C3M UQ8 . . . B 2 -6.523 2.167 -16.045 1 79.91 ? C3M UQ8 201 A 1 HETATM 49 C C4 UQ8 . . . B 2 -3.907 3.901 -14.655 1 72.55 ? C4 UQ8 201 A 1 HETATM 50 O O4 UQ8 . . . B 2 -4.806 4.365 -13.72 1 73.82 ? O4 UQ8 201 A 1 HETATM 51 C C4M UQ8 . . . B 2 -5.824 5.306 -14.055 1 71.3 ? C4M UQ8 201 A 1 HETATM 52 C C5 UQ8 . . . B 2 -2.624 4.625 -14.893 1 70.15 ? C5 UQ8 201 A 1 HETATM 53 O O5 UQ8 . . . B 2 -2.377 5.659 -14.24 1 64.65 ? O5 UQ8 201 A 1 # _model_server_stats.io_time_ms 62 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 350 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 53 #