data_7BWT # _model_server_result.job_id I9Kk2zrHxlqDG7mHplP7gg _model_server_result.datetime_utc '2024-11-15 16:21:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7bwt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":206}' # _entry.id 7BWT # _exptl.entry_id 7BWT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 9 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7BWT _cell.length_a 114.66 _cell.length_b 114.66 _cell.length_c 107.066 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7BWT _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall 'P 31 2"' _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 L N N ? 4 M N N ? 4 N N N ? 4 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B OG1 THR 21 B THR 22 1_555 K MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc2 J O1B GDP . B GDP 201 1_555 K MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? metalc ? metalc3 K MG MG . B MG 202 1_555 Q O HOH . B HOH 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? metalc ? metalc4 K MG MG . B MG 202 1_555 Q O HOH . B HOH 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc5 K MG MG . B MG 202 1_555 Q O HOH . B HOH 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? metalc ? metalc6 K MG MG . B MG 202 1_555 Q O HOH . B HOH 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 174 n n C1 C2 GOL sing 175 n n C1 H11 GOL sing 176 n n C1 H12 GOL sing 177 n n O1 HO1 GOL sing 178 n n C2 O2 GOL sing 179 n n C2 C3 GOL sing 180 n n C2 H2 GOL sing 181 n n O2 HO2 GOL sing 182 n n C3 O3 GOL sing 183 n n C3 H31 GOL sing 184 n n C3 H32 GOL sing 185 n n O3 HO3 GOL sing 186 n n # _atom_sites.entry_id 7BWT _atom_sites.fract_transf_matrix[1][1] 0.008721 _atom_sites.fract_transf_matrix[1][2] 0.005035 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010071 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00934 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PEG A 1 401 1 PEG PEG . D 3 PEG A 1 402 2 PEG PEG . E 4 GOL A 1 403 3 GOL GOL . F 4 GOL A 1 404 4 GOL GOL . G 4 GOL A 1 405 5 GOL GOL . H 4 GOL A 1 406 7 GOL GOL . I 4 GOL A 1 407 9 GOL GOL . J 5 GDP B 1 201 1 GDP GDP . K 6 MG B 1 202 1 MG MG . L 4 GOL B 1 203 1 GOL GOL . M 4 GOL B 1 204 2 GOL GOL . N 4 GOL B 1 205 6 GOL GOL . O 4 GOL B 1 206 8 GOL GOL . P 7 HOH A 1 501 41 HOH HOH . P 7 HOH A 2 502 88 HOH HOH . P 7 HOH A 3 503 4 HOH HOH . P 7 HOH A 4 504 49 HOH HOH . P 7 HOH A 5 505 110 HOH HOH . P 7 HOH A 6 506 12 HOH HOH . P 7 HOH A 7 507 58 HOH HOH . P 7 HOH A 8 508 1 HOH HOH . P 7 HOH A 9 509 16 HOH HOH . P 7 HOH A 10 510 8 HOH HOH . P 7 HOH A 11 511 68 HOH HOH . P 7 HOH A 12 512 105 HOH HOH . P 7 HOH A 13 513 18 HOH HOH . P 7 HOH A 14 514 69 HOH HOH . P 7 HOH A 15 515 48 HOH HOH . P 7 HOH A 16 516 17 HOH HOH . P 7 HOH A 17 517 78 HOH HOH . P 7 HOH A 18 518 75 HOH HOH . P 7 HOH A 19 519 7 HOH HOH . P 7 HOH A 20 520 72 HOH HOH . P 7 HOH A 21 521 36 HOH HOH . P 7 HOH A 22 522 15 HOH HOH . P 7 HOH A 23 523 3 HOH HOH . P 7 HOH A 24 524 38 HOH HOH . P 7 HOH A 25 525 57 HOH HOH . P 7 HOH A 26 526 62 HOH HOH . P 7 HOH A 27 527 108 HOH HOH . P 7 HOH A 28 528 51 HOH HOH . P 7 HOH A 29 529 19 HOH HOH . P 7 HOH A 30 530 2 HOH HOH . P 7 HOH A 31 531 111 HOH HOH . P 7 HOH A 32 532 77 HOH HOH . P 7 HOH A 33 533 25 HOH HOH . P 7 HOH A 34 534 27 HOH HOH . P 7 HOH A 35 535 55 HOH HOH . P 7 HOH A 36 536 6 HOH HOH . P 7 HOH A 37 537 10 HOH HOH . P 7 HOH A 38 538 24 HOH HOH . P 7 HOH A 39 539 26 HOH HOH . P 7 HOH A 40 540 91 HOH HOH . P 7 HOH A 41 541 109 HOH HOH . P 7 HOH A 42 542 13 HOH HOH . P 7 HOH A 43 543 9 HOH HOH . P 7 HOH A 44 544 23 HOH HOH . P 7 HOH A 45 545 5 HOH HOH . P 7 HOH A 46 546 76 HOH HOH . P 7 HOH A 47 547 107 HOH HOH . P 7 HOH A 48 548 33 HOH HOH . P 7 HOH A 49 549 32 HOH HOH . P 7 HOH A 50 550 52 HOH HOH . P 7 HOH A 51 551 89 HOH HOH . P 7 HOH A 52 552 113 HOH HOH . P 7 HOH A 53 553 14 HOH HOH . P 7 HOH A 54 554 44 HOH HOH . P 7 HOH A 55 555 102 HOH HOH . P 7 HOH A 56 556 74 HOH HOH . P 7 HOH A 57 557 22 HOH HOH . P 7 HOH A 58 558 54 HOH HOH . P 7 HOH A 59 559 50 HOH HOH . P 7 HOH A 60 560 31 HOH HOH . P 7 HOH A 61 561 56 HOH HOH . P 7 HOH A 62 562 28 HOH HOH . P 7 HOH A 63 563 79 HOH HOH . P 7 HOH A 64 564 35 HOH HOH . P 7 HOH A 65 565 98 HOH HOH . P 7 HOH A 66 566 87 HOH HOH . P 7 HOH A 67 567 65 HOH HOH . P 7 HOH A 68 568 67 HOH HOH . P 7 HOH A 69 569 86 HOH HOH . P 7 HOH A 70 570 63 HOH HOH . P 7 HOH A 71 571 85 HOH HOH . P 7 HOH A 72 572 37 HOH HOH . P 7 HOH A 73 573 34 HOH HOH . P 7 HOH A 74 574 106 HOH HOH . P 7 HOH A 75 575 40 HOH HOH . P 7 HOH A 76 576 30 HOH HOH . P 7 HOH A 77 577 71 HOH HOH . P 7 HOH A 78 578 101 HOH HOH . P 7 HOH A 79 579 90 HOH HOH . P 7 HOH A 80 580 66 HOH HOH . P 7 HOH A 81 581 64 HOH HOH . P 7 HOH A 82 582 39 HOH HOH . P 7 HOH A 83 583 73 HOH HOH . P 7 HOH A 84 584 97 HOH HOH . Q 7 HOH B 1 301 94 HOH HOH . Q 7 HOH B 2 302 80 HOH HOH . Q 7 HOH B 3 303 104 HOH HOH . Q 7 HOH B 4 304 112 HOH HOH . Q 7 HOH B 5 305 114 HOH HOH . Q 7 HOH B 6 306 47 HOH HOH . Q 7 HOH B 7 307 117 HOH HOH . Q 7 HOH B 8 308 20 HOH HOH . Q 7 HOH B 9 309 116 HOH HOH . Q 7 HOH B 10 310 84 HOH HOH . Q 7 HOH B 11 311 21 HOH HOH . Q 7 HOH B 12 312 82 HOH HOH . Q 7 HOH B 13 313 46 HOH HOH . Q 7 HOH B 14 314 53 HOH HOH . Q 7 HOH B 15 315 70 HOH HOH . Q 7 HOH B 16 316 60 HOH HOH . Q 7 HOH B 17 317 11 HOH HOH . Q 7 HOH B 18 318 96 HOH HOH . Q 7 HOH B 19 319 115 HOH HOH . Q 7 HOH B 20 320 93 HOH HOH . Q 7 HOH B 21 321 45 HOH HOH . Q 7 HOH B 22 322 81 HOH HOH . Q 7 HOH B 23 323 95 HOH HOH . Q 7 HOH B 24 324 99 HOH HOH . Q 7 HOH B 25 325 83 HOH HOH . Q 7 HOH B 26 326 29 HOH HOH . Q 7 HOH B 27 327 61 HOH HOH . Q 7 HOH B 28 328 119 HOH HOH . Q 7 HOH B 29 329 42 HOH HOH . Q 7 HOH B 30 330 59 HOH HOH . Q 7 HOH B 31 331 92 HOH HOH . Q 7 HOH B 32 332 43 HOH HOH . Q 7 HOH B 33 333 120 HOH HOH . Q 7 HOH B 34 334 118 HOH HOH . Q 7 HOH B 35 335 100 HOH HOH . Q 7 HOH B 36 336 103 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . O 4 60.877 8.038 -11.339 1 131.83 ? C1 GOL 206 B 1 HETATM 2 O O1 GOL . . . O 4 60.378 9.258 -11.811 1 132.94 ? O1 GOL 206 B 1 HETATM 3 C C2 GOL . . . O 4 59.712 7.13 -10.95 1 131.23 ? C2 GOL 206 B 1 HETATM 4 O O2 GOL . . . O 4 59.443 7.261 -9.581 1 131.62 ? O2 GOL 206 B 1 HETATM 5 C C3 GOL . . . O 4 60.065 5.68 -11.274 1 131 ? C3 GOL 206 B 1 HETATM 6 O O3 GOL . . . O 4 60.161 5.528 -12.664 1 130.83 ? O3 GOL 206 B 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 38 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 6 #