data_7BY9 # _model_server_result.job_id uk45IhYeyMXNDlmKXPCK6w _model_server_result.datetime_utc '2025-02-05 17:58:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7by9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":401}' # _entry.id 7BY9 # _exptl.entry_id 7BY9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 131.064 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'OXALOACETATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.42 _cell.angle_gamma 90 _cell.entry_id 7BY9 _cell.length_a 63.156 _cell.length_b 83.239 _cell.length_c 119.477 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7BY9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N ? 3 J N N ? 3 L N N # _chem_comp.formula 'C4 H3 O5 -1' _chem_comp.formula_weight 131.064 _chem_comp.id OAA _chem_comp.mon_nstd_flag . _chem_comp.name 'OXALOACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 OAA doub 312 n n O2 C1 OAA sing 313 n n O4 C4 OAA doub 314 n n O5 C4 OAA sing 315 n n O5 HO5 OAA sing 316 n n O3 C3 OAA doub 317 n n C1 C2 OAA sing 318 n n C2 C3 OAA sing 319 n n C2 H21 OAA sing 320 n n C2 H22 OAA sing 321 n n C3 C4 OAA sing 322 n n # _atom_sites.entry_id 7BY9 _atom_sites.fract_transf_matrix[1][1] 0.015834 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000946 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012014 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008385 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 NAD A 1 400 400 NAD NAD . F 3 OAA A 1 401 401 OAA OAA . G 2 NAD B 1 400 400 NAD NAD . H 3 OAA B 1 401 401 OAA OAA . I 2 NAD C 1 400 400 NAD NAD . J 3 OAA C 1 401 401 OAA OAA . K 2 NAD D 1 400 400 NAD NAD . L 3 OAA D 1 401 401 OAA OAA . M 4 HOH A 1 501 20 HOH HOH . M 4 HOH A 2 502 25 HOH HOH . M 4 HOH A 3 503 15 HOH HOH . M 4 HOH A 4 504 22 HOH HOH . M 4 HOH A 5 505 1 HOH HOH . M 4 HOH A 6 506 23 HOH HOH . M 4 HOH A 7 507 12 HOH HOH . M 4 HOH A 8 508 18 HOH HOH . M 4 HOH A 9 509 8 HOH HOH . M 4 HOH A 10 510 24 HOH HOH . N 4 HOH B 1 501 29 HOH HOH . N 4 HOH B 2 502 26 HOH HOH . N 4 HOH B 3 503 21 HOH HOH . N 4 HOH B 4 504 17 HOH HOH . N 4 HOH B 5 505 28 HOH HOH . N 4 HOH B 6 506 3 HOH HOH . N 4 HOH B 7 507 6 HOH HOH . N 4 HOH B 8 508 27 HOH HOH . O 4 HOH C 1 501 2 HOH HOH . O 4 HOH C 2 502 13 HOH HOH . P 4 HOH D 1 501 30 HOH HOH . P 4 HOH D 2 502 34 HOH HOH . P 4 HOH D 3 503 5 HOH HOH . P 4 HOH D 4 504 4 HOH HOH . P 4 HOH D 5 505 16 HOH HOH . P 4 HOH D 6 506 7 HOH HOH . P 4 HOH D 7 507 10 HOH HOH . P 4 HOH D 8 508 9 HOH HOH . P 4 HOH D 9 509 32 HOH HOH . P 4 HOH D 10 510 31 HOH HOH . P 4 HOH D 11 511 11 HOH HOH . P 4 HOH D 12 512 14 HOH HOH . P 4 HOH D 13 513 19 HOH HOH . P 4 HOH D 14 514 33 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 OAA . . . J 3 24.091 -33.39 6.635 1 52.27 ? O1 OAA 401 C 1 HETATM 2 O O2 OAA . . . J 3 24.248 -35.446 7.446 1 61.02 ? O2 OAA 401 C 1 HETATM 3 O O4 OAA . . . J 3 21.226 -33.071 10.129 1 50.56 ? O4 OAA 401 C 1 HETATM 4 O O5 OAA . . . J 3 21.265 -34.869 11.269 1 56.34 ? O5 OAA 401 C 1 HETATM 5 O O3 OAA . . . J 3 23.321 -35.684 10.144 1 61.44 ? O3 OAA 401 C 1 HETATM 6 C C1 OAA . . . J 3 24.02 -34.219 7.575 1 60.41 ? C1 OAA 401 C 1 HETATM 7 C C2 OAA . . . J 3 23.705 -33.68 8.97 1 54.54 ? C2 OAA 401 C 1 HETATM 8 C C3 OAA . . . J 3 22.893 -34.563 9.883 1 56.85 ? C3 OAA 401 C 1 HETATM 9 C C4 OAA . . . J 3 21.763 -34.151 10.439 1 55.51 ? C4 OAA 401 C 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 9 #