data_7BYI # _model_server_result.job_id f6ZpdjOl_CwJW9Z522LAEw _model_server_result.datetime_utc '2025-03-21 13:57:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7byi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":601}' # _entry.id 7BYI # _exptl.entry_id 7BYI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 570.757 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CARBENOXOLONE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7BYI _cell.length_a 158.62 _cell.length_b 158.62 _cell.length_c 209.427 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7BYI _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N # _chem_comp.formula 'C34 H50 O7' _chem_comp.formula_weight 570.757 _chem_comp.id CBO _chem_comp.mon_nstd_flag . _chem_comp.name CARBENOXOLONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CBO sing 70 n n C1 C10 CBO sing 71 n n C1 H11 CBO sing 72 n n C1 H12A CBO sing 73 n n C2 C3 CBO sing 74 n n C2 H21 CBO sing 75 n n C2 H22 CBO sing 76 n n C3 C4 CBO sing 77 n n C3 O3 CBO sing 78 n n C3 H3 CBO sing 79 n n C4 C5 CBO sing 80 n n C4 C24 CBO sing 81 n n C4 C25 CBO sing 82 n n C5 C6 CBO sing 83 n n C5 C10 CBO sing 84 n n C5 H5 CBO sing 85 n n C6 C7 CBO sing 86 n n C6 H61 CBO sing 87 n n C6 H62 CBO sing 88 n n C7 C8 CBO sing 89 n n C7 H71 CBO sing 90 n n C7 H72 CBO sing 91 n n C8 C9 CBO sing 92 n n C8 C14 CBO sing 93 n n C8 C26 CBO sing 94 n n C9 C10 CBO sing 95 n n C9 C11 CBO sing 96 n n C9 H9 CBO sing 97 n n C10 C19 CBO sing 98 n n C11 C12 CBO sing 99 n n C11 O11 CBO doub 100 n n C12 C13 CBO doub 101 n n C12 H12 CBO sing 102 n n C13 C14 CBO sing 103 n n C13 C18 CBO sing 104 n n C14 C15 CBO sing 105 n n C14 C27 CBO sing 106 n n C15 C16 CBO sing 107 n n C15 H151 CBO sing 108 n n C15 H152 CBO sing 109 n n C16 C17 CBO sing 110 n n C16 H161 CBO sing 111 n n C16 H162 CBO sing 112 n n C17 C18 CBO sing 113 n n C17 C23 CBO sing 114 n n C17 C28 CBO sing 115 n n C18 C20 CBO sing 116 n n C18 H18 CBO sing 117 n n C19 H191 CBO sing 118 n n C19 H192 CBO sing 119 n n C19 H193 CBO sing 120 n n C20 C21 CBO sing 121 n n C20 H201 CBO sing 122 n n C20 H202 CBO sing 123 n n C21 C22 CBO sing 124 n n C21 C33 CBO sing 125 n n C21 C34 CBO sing 126 n n C22 C23 CBO sing 127 n n C22 H221 CBO sing 128 n n C22 H222 CBO sing 129 n n C23 H231 CBO sing 130 n n C23 H232 CBO sing 131 n n C24 H241 CBO sing 132 n n C24 H242 CBO sing 133 n n C24 H243 CBO sing 134 n n C25 H251 CBO sing 135 n n C25 H252 CBO sing 136 n n C25 H253 CBO sing 137 n n C26 H261 CBO sing 138 n n C26 H262 CBO sing 139 n n C26 H263 CBO sing 140 n n C27 H271 CBO sing 141 n n C27 H272 CBO sing 142 n n C27 H273 CBO sing 143 n n C28 H281 CBO sing 144 n n C28 H282 CBO sing 145 n n C28 H283 CBO sing 146 n n C29 C30 CBO sing 147 n n C29 O3 CBO sing 148 n n C29 O29 CBO doub 149 n n C30 C31 CBO sing 150 n n C30 H301 CBO sing 151 n n C30 H302 CBO sing 152 n n C31 C32 CBO sing 153 n n C31 H311 CBO sing 154 n n C31 H312 CBO sing 155 n n C32 O32 CBO doub 156 n n C32 O33 CBO sing 157 n n C33 O34 CBO doub 158 n n C33 O35 CBO sing 159 n n C34 H341 CBO sing 160 n n C34 H342 CBO sing 161 n n C34 H343 CBO sing 162 n n O33 H33 CBO sing 163 n n O35 H35 CBO sing 164 n n # _atom_sites.entry_id 7BYI _atom_sites.fract_transf_matrix[1][1] 0.006304 _atom_sites.fract_transf_matrix[1][2] 0.00364 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00728 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004775 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PO4 A 1 701 701 PO4 PO4 . D 4 PEG A 1 702 801 PEG PEG . E 5 CBO B 1 601 601 CBO DRG . F 5 CBO B 1 602 601 CBO DRG . G 3 PO4 B 1 603 701 PO4 PO4 . H 6 HOH A 1 801 35 HOH HOH . H 6 HOH A 2 802 23 HOH HOH . H 6 HOH A 3 803 7 HOH HOH . H 6 HOH A 4 804 45 HOH HOH . H 6 HOH A 5 805 5 HOH HOH . H 6 HOH A 6 806 29 HOH HOH . H 6 HOH A 7 807 18 HOH HOH . H 6 HOH A 8 808 49 HOH HOH . H 6 HOH A 9 809 8 HOH HOH . H 6 HOH A 10 810 21 HOH HOH . H 6 HOH A 11 811 16 HOH HOH . H 6 HOH A 12 812 72 HOH HOH . H 6 HOH A 13 813 33 HOH HOH . H 6 HOH A 14 814 20 HOH HOH . H 6 HOH A 15 815 57 HOH HOH . H 6 HOH A 16 816 2 HOH HOH . H 6 HOH A 17 817 22 HOH HOH . H 6 HOH A 18 818 32 HOH HOH . H 6 HOH A 19 819 30 HOH HOH . H 6 HOH A 20 820 12 HOH HOH . H 6 HOH A 21 821 52 HOH HOH . H 6 HOH A 22 822 6 HOH HOH . H 6 HOH A 23 823 31 HOH HOH . H 6 HOH A 24 824 25 HOH HOH . H 6 HOH A 25 825 74 HOH HOH . H 6 HOH A 26 826 64 HOH HOH . H 6 HOH A 27 827 54 HOH HOH . H 6 HOH A 28 828 38 HOH HOH . H 6 HOH A 29 829 41 HOH HOH . H 6 HOH A 30 830 75 HOH HOH . H 6 HOH A 31 831 71 HOH HOH . H 6 HOH A 32 832 73 HOH HOH . H 6 HOH A 33 833 55 HOH HOH . H 6 HOH A 34 834 34 HOH HOH . H 6 HOH A 35 835 67 HOH HOH . I 6 HOH B 1 701 4 HOH HOH . I 6 HOH B 2 702 48 HOH HOH . I 6 HOH B 3 703 9 HOH HOH . I 6 HOH B 4 704 43 HOH HOH . I 6 HOH B 5 705 50 HOH HOH . I 6 HOH B 6 706 46 HOH HOH . I 6 HOH B 7 707 37 HOH HOH . I 6 HOH B 8 708 10 HOH HOH . I 6 HOH B 9 709 44 HOH HOH . I 6 HOH B 10 710 3 HOH HOH . I 6 HOH B 11 711 15 HOH HOH . I 6 HOH B 12 712 26 HOH HOH . I 6 HOH B 13 713 47 HOH HOH . I 6 HOH B 14 714 51 HOH HOH . I 6 HOH B 15 715 11 HOH HOH . I 6 HOH B 16 716 56 HOH HOH . I 6 HOH B 17 717 24 HOH HOH . I 6 HOH B 18 718 39 HOH HOH . I 6 HOH B 19 719 19 HOH HOH . I 6 HOH B 20 720 42 HOH HOH . I 6 HOH B 21 721 40 HOH HOH . I 6 HOH B 22 722 14 HOH HOH . I 6 HOH B 23 723 17 HOH HOH . I 6 HOH B 24 724 13 HOH HOH . I 6 HOH B 25 725 1 HOH HOH . I 6 HOH B 26 726 28 HOH HOH . I 6 HOH B 27 727 36 HOH HOH . I 6 HOH B 28 728 70 HOH HOH . I 6 HOH B 29 729 58 HOH HOH . I 6 HOH B 30 730 78 HOH HOH . I 6 HOH B 31 731 65 HOH HOH . I 6 HOH B 32 732 53 HOH HOH . I 6 HOH B 33 733 59 HOH HOH . I 6 HOH B 34 734 27 HOH HOH . I 6 HOH B 35 735 76 HOH HOH . I 6 HOH B 36 736 77 HOH HOH . I 6 HOH B 37 737 66 HOH HOH . I 6 HOH B 38 738 69 HOH HOH . I 6 HOH B 39 739 60 HOH HOH . I 6 HOH B 40 740 62 HOH HOH . I 6 HOH B 41 741 68 HOH HOH . I 6 HOH B 42 742 61 HOH HOH . I 6 HOH B 43 743 63 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CBO . . . E 5 39.024 -73.911 5.987 1 145.63 ? C1 CBO 601 B 1 HETATM 2 C C2 CBO . . . E 5 37.86 -74.776 5.523 1 134.27 ? C2 CBO 601 B 1 HETATM 3 C C3 CBO . . . E 5 37.984 -75.135 4.087 1 120.78 ? C3 CBO 601 B 1 HETATM 4 C C4 CBO . . . E 5 37.718 -73.95 3.251 1 121.64 ? C4 CBO 601 B 1 HETATM 5 C C5 CBO . . . E 5 38.809 -72.821 3.555 1 127.94 ? C5 CBO 601 B 1 HETATM 6 C C6 CBO . . . E 5 38.389 -71.517 2.842 1 131.27 ? C6 CBO 601 B 1 HETATM 7 C C7 CBO . . . E 5 37.589 -70.649 3.75 1 136.06 ? C7 CBO 601 B 1 HETATM 8 C C8 CBO . . . E 5 38.503 -70.074 4.788 1 141.49 ? C8 CBO 601 B 1 HETATM 9 C C9 CBO . . . E 5 38.699 -71.199 5.814 1 146.64 ? C9 CBO 601 B 1 HETATM 10 C C10 CBO . . . E 5 39.324 -72.608 5.12 1 142.83 ? C10 CBO 601 B 1 HETATM 11 C C11 CBO . . . E 5 39.365 -70.594 6.943 1 154.82 ? C11 CBO 601 B 1 HETATM 12 C C12 CBO . . . E 5 39.198 -69.222 7.276 1 153.24 ? C12 CBO 601 B 1 HETATM 13 C C13 CBO . . . E 5 38.398 -68.304 6.563 1 150.59 ? C13 CBO 601 B 1 HETATM 14 C C14 CBO . . . E 5 37.765 -68.784 5.415 1 146.93 ? C14 CBO 601 B 1 HETATM 15 C C15 CBO . . . E 5 37.825 -67.634 4.303 1 162.74 ? C15 CBO 601 B 1 HETATM 16 C C16 CBO . . . E 5 38.827 -66.448 4.555 1 162.93 ? C16 CBO 601 B 1 HETATM 17 C C17 CBO . . . E 5 39.321 -66.151 5.945 1 154.99 ? C17 CBO 601 B 1 HETATM 18 C C18 CBO . . . E 5 38.347 -66.878 6.91 1 154.72 ? C18 CBO 601 B 1 HETATM 19 C C19 CBO . . . E 5 40.874 -72.537 5.011 1 142.42 ? C19 CBO 601 B 1 HETATM 20 C C20 CBO . . . E 5 36.881 -66.176 6.939 1 156.76 ? C20 CBO 601 B 1 HETATM 21 C C21 CBO . . . E 5 36.885 -64.597 6.508 1 153.91 ? C21 CBO 601 B 1 HETATM 22 C C22 CBO . . . E 5 38.22 -64.049 6.949 1 156.25 ? C22 CBO 601 B 1 HETATM 23 C C23 CBO . . . E 5 39.344 -64.562 6.11 1 151.97 ? C23 CBO 601 B 1 HETATM 24 C C24 CBO . . . E 5 36.255 -73.535 3.481 1 120.78 ? C24 CBO 601 B 1 HETATM 25 C C25 CBO . . . E 5 37.832 -74.388 1.786 1 117.28 ? C25 CBO 601 B 1 HETATM 26 C C26 CBO . . . E 5 39.873 -69.614 4.18 1 138.27 ? C26 CBO 601 B 1 HETATM 27 C C27 CBO . . . E 5 36.301 -69.184 5.813 1 132.35 ? C27 CBO 601 B 1 HETATM 28 C C28 CBO . . . E 5 40.8 -66.601 6.123 1 145.77 ? C28 CBO 601 B 1 HETATM 29 C C29 CBO . . . E 5 39.286 -76.705 2.916 1 96.38 ? C29 CBO 601 B 1 HETATM 30 C C30 CBO . . . E 5 40.525 -76.825 2.006 1 101.59 ? C30 CBO 601 B 1 HETATM 31 C C31 CBO . . . E 5 40.493 -78.182 1.292 1 104.61 ? C31 CBO 601 B 1 HETATM 32 C C32 CBO . . . E 5 41.214 -79.209 2.18 1 103.63 ? C32 CBO 601 B 1 HETATM 33 C C33 CBO . . . E 5 35.793 -63.708 7.181 1 144.32 ? C33 CBO 601 B 1 HETATM 34 C C34 CBO . . . E 5 36.548 -64.365 5.013 1 151.03 ? C34 CBO 601 B 1 HETATM 35 O O3 CBO . . . E 5 39.321 -75.657 3.771 1 108.07 ? O3 CBO 601 B 1 HETATM 36 O O11 CBO . . . E 5 40.077 -71.248 7.709 1 159.85 ? O11 CBO 601 B 1 HETATM 37 O O29 CBO . . . E 5 38.332 -77.467 2.847 1 80.37 ? O29 CBO 601 B 1 HETATM 38 O O32 CBO . . . E 5 41.089 -79.143 3.429 1 94.97 ? O32 CBO 601 B 1 HETATM 39 O O33 CBO . . . E 5 41.876 -80.089 1.584 1 100.07 ? O33 CBO 601 B 1 HETATM 40 O O34 CBO . . . E 5 34.841 -64.276 7.733 1 140.02 ? O34 CBO 601 B 1 HETATM 41 O O35 CBO . . . E 5 35.859 -62.461 7.025 1 127.04 ? O35 CBO 601 B 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 41 #