data_7BYI # _model_server_result.job_id rqMilG6M7wnxKZjrW2Is0w _model_server_result.datetime_utc '2025-03-21 18:45:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7byi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":602}' # _entry.id 7BYI # _exptl.entry_id 7BYI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 570.757 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CARBENOXOLONE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7BYI _cell.length_a 158.62 _cell.length_b 158.62 _cell.length_c 209.427 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7BYI _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N # _chem_comp.formula 'C34 H50 O7' _chem_comp.formula_weight 570.757 _chem_comp.id CBO _chem_comp.mon_nstd_flag . _chem_comp.name CARBENOXOLONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CBO sing 70 n n C1 C10 CBO sing 71 n n C1 H11 CBO sing 72 n n C1 H12A CBO sing 73 n n C2 C3 CBO sing 74 n n C2 H21 CBO sing 75 n n C2 H22 CBO sing 76 n n C3 C4 CBO sing 77 n n C3 O3 CBO sing 78 n n C3 H3 CBO sing 79 n n C4 C5 CBO sing 80 n n C4 C24 CBO sing 81 n n C4 C25 CBO sing 82 n n C5 C6 CBO sing 83 n n C5 C10 CBO sing 84 n n C5 H5 CBO sing 85 n n C6 C7 CBO sing 86 n n C6 H61 CBO sing 87 n n C6 H62 CBO sing 88 n n C7 C8 CBO sing 89 n n C7 H71 CBO sing 90 n n C7 H72 CBO sing 91 n n C8 C9 CBO sing 92 n n C8 C14 CBO sing 93 n n C8 C26 CBO sing 94 n n C9 C10 CBO sing 95 n n C9 C11 CBO sing 96 n n C9 H9 CBO sing 97 n n C10 C19 CBO sing 98 n n C11 C12 CBO sing 99 n n C11 O11 CBO doub 100 n n C12 C13 CBO doub 101 n n C12 H12 CBO sing 102 n n C13 C14 CBO sing 103 n n C13 C18 CBO sing 104 n n C14 C15 CBO sing 105 n n C14 C27 CBO sing 106 n n C15 C16 CBO sing 107 n n C15 H151 CBO sing 108 n n C15 H152 CBO sing 109 n n C16 C17 CBO sing 110 n n C16 H161 CBO sing 111 n n C16 H162 CBO sing 112 n n C17 C18 CBO sing 113 n n C17 C23 CBO sing 114 n n C17 C28 CBO sing 115 n n C18 C20 CBO sing 116 n n C18 H18 CBO sing 117 n n C19 H191 CBO sing 118 n n C19 H192 CBO sing 119 n n C19 H193 CBO sing 120 n n C20 C21 CBO sing 121 n n C20 H201 CBO sing 122 n n C20 H202 CBO sing 123 n n C21 C22 CBO sing 124 n n C21 C33 CBO sing 125 n n C21 C34 CBO sing 126 n n C22 C23 CBO sing 127 n n C22 H221 CBO sing 128 n n C22 H222 CBO sing 129 n n C23 H231 CBO sing 130 n n C23 H232 CBO sing 131 n n C24 H241 CBO sing 132 n n C24 H242 CBO sing 133 n n C24 H243 CBO sing 134 n n C25 H251 CBO sing 135 n n C25 H252 CBO sing 136 n n C25 H253 CBO sing 137 n n C26 H261 CBO sing 138 n n C26 H262 CBO sing 139 n n C26 H263 CBO sing 140 n n C27 H271 CBO sing 141 n n C27 H272 CBO sing 142 n n C27 H273 CBO sing 143 n n C28 H281 CBO sing 144 n n C28 H282 CBO sing 145 n n C28 H283 CBO sing 146 n n C29 C30 CBO sing 147 n n C29 O3 CBO sing 148 n n C29 O29 CBO doub 149 n n C30 C31 CBO sing 150 n n C30 H301 CBO sing 151 n n C30 H302 CBO sing 152 n n C31 C32 CBO sing 153 n n C31 H311 CBO sing 154 n n C31 H312 CBO sing 155 n n C32 O32 CBO doub 156 n n C32 O33 CBO sing 157 n n C33 O34 CBO doub 158 n n C33 O35 CBO sing 159 n n C34 H341 CBO sing 160 n n C34 H342 CBO sing 161 n n C34 H343 CBO sing 162 n n O33 H33 CBO sing 163 n n O35 H35 CBO sing 164 n n # _atom_sites.entry_id 7BYI _atom_sites.fract_transf_matrix[1][1] 0.006304 _atom_sites.fract_transf_matrix[1][2] 0.00364 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00728 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004775 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PO4 A 1 701 701 PO4 PO4 . D 4 PEG A 1 702 801 PEG PEG . E 5 CBO B 1 601 601 CBO DRG . F 5 CBO B 1 602 601 CBO DRG . G 3 PO4 B 1 603 701 PO4 PO4 . H 6 HOH A 1 801 35 HOH HOH . H 6 HOH A 2 802 23 HOH HOH . H 6 HOH A 3 803 7 HOH HOH . H 6 HOH A 4 804 45 HOH HOH . H 6 HOH A 5 805 5 HOH HOH . H 6 HOH A 6 806 29 HOH HOH . H 6 HOH A 7 807 18 HOH HOH . H 6 HOH A 8 808 49 HOH HOH . H 6 HOH A 9 809 8 HOH HOH . H 6 HOH A 10 810 21 HOH HOH . H 6 HOH A 11 811 16 HOH HOH . H 6 HOH A 12 812 72 HOH HOH . H 6 HOH A 13 813 33 HOH HOH . H 6 HOH A 14 814 20 HOH HOH . H 6 HOH A 15 815 57 HOH HOH . H 6 HOH A 16 816 2 HOH HOH . H 6 HOH A 17 817 22 HOH HOH . H 6 HOH A 18 818 32 HOH HOH . H 6 HOH A 19 819 30 HOH HOH . H 6 HOH A 20 820 12 HOH HOH . H 6 HOH A 21 821 52 HOH HOH . H 6 HOH A 22 822 6 HOH HOH . H 6 HOH A 23 823 31 HOH HOH . H 6 HOH A 24 824 25 HOH HOH . H 6 HOH A 25 825 74 HOH HOH . H 6 HOH A 26 826 64 HOH HOH . H 6 HOH A 27 827 54 HOH HOH . H 6 HOH A 28 828 38 HOH HOH . H 6 HOH A 29 829 41 HOH HOH . H 6 HOH A 30 830 75 HOH HOH . H 6 HOH A 31 831 71 HOH HOH . H 6 HOH A 32 832 73 HOH HOH . H 6 HOH A 33 833 55 HOH HOH . H 6 HOH A 34 834 34 HOH HOH . H 6 HOH A 35 835 67 HOH HOH . I 6 HOH B 1 701 4 HOH HOH . I 6 HOH B 2 702 48 HOH HOH . I 6 HOH B 3 703 9 HOH HOH . I 6 HOH B 4 704 43 HOH HOH . I 6 HOH B 5 705 50 HOH HOH . I 6 HOH B 6 706 46 HOH HOH . I 6 HOH B 7 707 37 HOH HOH . I 6 HOH B 8 708 10 HOH HOH . I 6 HOH B 9 709 44 HOH HOH . I 6 HOH B 10 710 3 HOH HOH . I 6 HOH B 11 711 15 HOH HOH . I 6 HOH B 12 712 26 HOH HOH . I 6 HOH B 13 713 47 HOH HOH . I 6 HOH B 14 714 51 HOH HOH . I 6 HOH B 15 715 11 HOH HOH . I 6 HOH B 16 716 56 HOH HOH . I 6 HOH B 17 717 24 HOH HOH . I 6 HOH B 18 718 39 HOH HOH . I 6 HOH B 19 719 19 HOH HOH . I 6 HOH B 20 720 42 HOH HOH . I 6 HOH B 21 721 40 HOH HOH . I 6 HOH B 22 722 14 HOH HOH . I 6 HOH B 23 723 17 HOH HOH . I 6 HOH B 24 724 13 HOH HOH . I 6 HOH B 25 725 1 HOH HOH . I 6 HOH B 26 726 28 HOH HOH . I 6 HOH B 27 727 36 HOH HOH . I 6 HOH B 28 728 70 HOH HOH . I 6 HOH B 29 729 58 HOH HOH . I 6 HOH B 30 730 78 HOH HOH . I 6 HOH B 31 731 65 HOH HOH . I 6 HOH B 32 732 53 HOH HOH . I 6 HOH B 33 733 59 HOH HOH . I 6 HOH B 34 734 27 HOH HOH . I 6 HOH B 35 735 76 HOH HOH . I 6 HOH B 36 736 77 HOH HOH . I 6 HOH B 37 737 66 HOH HOH . I 6 HOH B 38 738 69 HOH HOH . I 6 HOH B 39 739 60 HOH HOH . I 6 HOH B 40 740 62 HOH HOH . I 6 HOH B 41 741 68 HOH HOH . I 6 HOH B 42 742 61 HOH HOH . I 6 HOH B 43 743 63 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CBO . . . F 5 5.446 -65.46 -11.535 1 138.08 ? C1 CBO 602 B 1 HETATM 2 C C2 CBO . . . F 5 5.529 -65.443 -13.057 1 137.27 ? C2 CBO 602 B 1 HETATM 3 C C3 CBO . . . F 5 4.203 -65.423 -13.759 1 138.73 ? C3 CBO 602 B 1 HETATM 4 C C4 CBO . . . F 5 3.294 -66.578 -13.221 1 143.99 ? C4 CBO 602 B 1 HETATM 5 C C5 CBO . . . F 5 3.006 -66.464 -11.664 1 143.04 ? C5 CBO 602 B 1 HETATM 6 C C6 CBO . . . F 5 2.959 -67.858 -10.942 1 145.07 ? C6 CBO 602 B 1 HETATM 7 C C7 CBO . . . F 5 2.19 -67.744 -9.676 1 144.84 ? C7 CBO 602 B 1 HETATM 8 C C8 CBO . . . F 5 2.842 -66.707 -8.737 1 145.39 ? C8 CBO 602 B 1 HETATM 9 C C9 CBO . . . F 5 4.185 -66.169 -9.376 1 136.69 ? C9 CBO 602 B 1 HETATM 10 C C10 CBO . . . F 5 4.019 -65.539 -10.858 1 138.66 ? C10 CBO 602 B 1 HETATM 11 C C11 CBO . . . F 5 4.869 -65.371 -8.44 1 132.07 ? C11 CBO 602 B 1 HETATM 12 C C12 CBO . . . F 5 4.789 -65.622 -7.069 1 137.71 ? C12 CBO 602 B 1 HETATM 13 C C13 CBO . . . F 5 4.003 -66.631 -6.5 1 140.99 ? C13 CBO 602 B 1 HETATM 14 C C14 CBO . . . F 5 3.184 -67.42 -7.313 1 145.65 ? C14 CBO 602 B 1 HETATM 15 C C15 CBO . . . F 5 1.896 -67.745 -6.466 1 149.29 ? C15 CBO 602 B 1 HETATM 16 C C16 CBO . . . F 5 1.475 -66.601 -5.49 1 153.11 ? C16 CBO 602 B 1 HETATM 17 C C17 CBO . . . F 5 2.649 -66.083 -4.634 1 148.95 ? C17 CBO 602 B 1 HETATM 18 C C18 CBO . . . F 5 3.951 -66.75 -5.066 1 141.85 ? C18 CBO 602 B 1 HETATM 19 C C19 CBO . . . F 5 3.424 -64.119 -10.745 1 134.31 ? C19 CBO 602 B 1 HETATM 20 C C20 CBO . . . F 5 4.182 -68.214 -4.499 1 145.07 ? C20 CBO 602 B 1 HETATM 21 C C21 CBO . . . F 5 3.453 -68.466 -3.11 1 146.79 ? C21 CBO 602 B 1 HETATM 22 C C22 CBO . . . F 5 3.329 -67.151 -2.411 1 150.08 ? C22 CBO 602 B 1 HETATM 23 C C23 CBO . . . F 5 2.326 -66.26 -3.103 1 149.03 ? C23 CBO 602 B 1 HETATM 24 C C24 CBO . . . F 5 3.982 -67.914 -13.578 1 144.52 ? C24 CBO 602 B 1 HETATM 25 C C25 CBO . . . F 5 1.951 -66.562 -13.994 1 145.24 ? C25 CBO 602 B 1 HETATM 26 C C26 CBO . . . F 5 1.802 -65.584 -8.558 1 150.59 ? C26 CBO 602 B 1 HETATM 27 C C27 CBO . . . F 5 3.91 -68.752 -7.611 1 141.52 ? C27 CBO 602 B 1 HETATM 28 C C28 CBO . . . F 5 2.791 -64.561 -4.897 1 147.15 ? C28 CBO 602 B 1 HETATM 29 C C29 CBO . . . F 5 4.275 -62.903 -13.67 1 135.92 ? C29 CBO 602 B 1 HETATM 30 C C30 CBO . . . F 5 4.486 -62.081 -14.963 1 132.17 ? C30 CBO 602 B 1 HETATM 31 C C31 CBO . . . F 5 5.368 -60.89 -14.553 1 129.23 ? C31 CBO 602 B 1 HETATM 32 C C32 CBO . . . F 5 6.353 -60.675 -15.665 1 125.23 ? C32 CBO 602 B 1 HETATM 33 C C33 CBO . . . F 5 4.31 -69.426 -2.203 1 143.09 ? C33 CBO 602 B 1 HETATM 34 C C34 CBO . . . F 5 2.062 -69.157 -3.22 1 147.76 ? C34 CBO 602 B 1 HETATM 35 O O3 CBO . . . F 5 3.544 -64.077 -13.767 1 133.85 ? O3 CBO 602 B 1 HETATM 36 O O11 CBO . . . F 5 5.639 -64.485 -8.793 1 123.58 ? O11 CBO 602 B 1 HETATM 37 O O29 CBO . . . F 5 4.697 -62.448 -12.607 1 132.29 ? O29 CBO 602 B 1 HETATM 38 O O32 CBO . . . F 5 5.888 -60.537 -16.812 1 120.47 ? O32 CBO 602 B 1 HETATM 39 O O33 CBO . . . F 5 7.561 -60.602 -15.354 1 125.72 ? O33 CBO 602 B 1 HETATM 40 O O34 CBO . . . F 5 5.212 -70.119 -2.741 1 128.63 ? O34 CBO 602 B 1 HETATM 41 O O35 CBO . . . F 5 4.011 -69.484 -0.984 1 138.07 ? O35 CBO 602 B 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 41 #