data_7BYM # _model_server_result.job_id NXybmBW_71qAwYpqoLPcKA _model_server_result.datetime_utc '2024-11-23 07:49:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7bym # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":701}' # _entry.id 7BYM # _exptl.entry_id 7BYM _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 303.331 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ethyl N-[2-azanyl-4-[(4-fluorophenyl)methylamino]phenyl]carbamate' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7BYM _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7BYM _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 J N N ? 4 N N N ? 4 P N N ? 4 R N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O THR 567 A THR 283 1_555 M K K . A K 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.194 ? metalc ? metalc2 A O ILE 568 A ILE 284 1_555 L K K . A K 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.654 ? metalc ? metalc3 A O GLY 569 A GLY 285 1_555 K K K . A K 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.045 ? metalc ? metalc4 A O TYR 570 A TYR 286 1_555 K K K . A K 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.122 ? metalc ? metalc5 K K K . A K 703 1_555 B O GLY 569 C GLY 285 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.954 ? metalc ? metalc6 K K K . A K 703 1_555 B O TYR 570 C TYR 286 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.105 ? metalc ? metalc7 K K K . A K 703 1_555 C O GLY 569 E GLY 285 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.696 ? metalc ? metalc8 K K K . A K 703 1_555 C O TYR 570 E TYR 286 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.935 ? metalc ? metalc9 K K K . A K 703 1_555 D O GLY 569 G GLY 285 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.104 ? metalc ? metalc10 K K K . A K 703 1_555 D O TYR 570 G TYR 286 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.123 ? metalc ? metalc11 L K K . A K 704 1_555 B O THR 567 C THR 283 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.453 ? metalc ? metalc12 L K K . A K 704 1_555 B O ILE 568 C ILE 284 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.605 ? metalc ? metalc13 L K K . A K 704 1_555 C O THR 567 E THR 283 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.28 ? metalc ? metalc14 L K K . A K 704 1_555 C O ILE 568 E ILE 284 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.511 ? metalc ? metalc15 L K K . A K 704 1_555 D O ILE 568 G ILE 284 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.709 ? metalc ? metalc16 M K K . A K 705 1_555 B O THR 567 C THR 283 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.063 ? metalc ? metalc17 M K K . A K 705 1_555 C O THR 567 E THR 283 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.972 ? metalc ? metalc18 M K K . A K 705 1_555 C OG1 THR 567 E THR 283 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.341 ? metalc ? metalc19 M K K . A K 705 1_555 D O THR 567 G THR 283 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.2 ? # _chem_comp.formula 'C16 H18 F N3 O2' _chem_comp.formula_weight 303.331 _chem_comp.id FBX _chem_comp.mon_nstd_flag . _chem_comp.name 'ethyl N-[2-azanyl-4-[(4-fluorophenyl)methylamino]phenyl]carbamate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'Retigabine, Ezogabine' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C17 C15 FBX doub 83 n y C17 C19 FBX sing 84 n y F1 C19 FBX sing 85 n n C15 C9 FBX sing 86 n y C19 C18 FBX doub 87 n y C9 C7 FBX sing 88 n n C9 C16 FBX doub 89 n y C18 C16 FBX sing 90 n y C7 N4 FBX sing 91 n n N4 C8 FBX sing 92 n n C11 C8 FBX doub 93 n y C11 C12 FBX sing 94 n y C8 C13 FBX sing 95 n y N6 C12 FBX sing 96 n n C12 C10 FBX doub 97 n y C13 C14 FBX doub 98 n y C10 C14 FBX sing 99 n y C10 N5 FBX sing 100 n n N5 C20 FBX sing 101 n n C20 O2 FBX sing 102 n n C20 O3 FBX doub 103 n n O2 C21 FBX sing 104 n n C21 C22 FBX sing 105 n n C13 H1 FBX sing 106 n n C15 H2 FBX sing 107 n n C17 H3 FBX sing 108 n n C21 H4 FBX sing 109 n n C21 H5 FBX sing 110 n n C22 H6 FBX sing 111 n n C22 H7 FBX sing 112 n n C22 H8 FBX sing 113 n n C7 H9 FBX sing 114 n n C7 H10 FBX sing 115 n n C11 H11 FBX sing 116 n n C14 H12 FBX sing 117 n n C16 H13 FBX sing 118 n n C18 H14 FBX sing 119 n n N4 H15 FBX sing 120 n n N5 H16 FBX sing 121 n n N6 H17 FBX sing 122 n n N6 H18 FBX sing 123 n n # _atom_sites.entry_id 7BYM _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 PT5 A 1 701 701 PT5 PT5 . J 4 FBX A 1 702 702 FBX LIG . K 5 K A 1 703 1 K K . L 5 K A 1 704 3 K K . M 5 K A 1 705 4 K K . N 4 FBX C 1 701 702 FBX LIG . O 3 PT5 C 1 702 701 PT5 PT5 . P 4 FBX E 1 701 702 FBX LIG . Q 3 PT5 E 1 702 701 PT5 PT5 . R 4 FBX G 1 701 702 FBX LIG . S 3 PT5 G 1 702 701 PT5 PT5 . T 6 HOH A 1 801 703 HOH HOH . U 6 HOH C 1 801 703 HOH HOH . V 6 HOH E 1 801 703 HOH HOH . W 6 HOH G 1 801 703 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 FBX . . . N 4 165.736 183.888 158.335 1 64.92 ? C10 FBX 701 C 1 HETATM 2 C C13 FBX . . . N 4 166.131 186.291 158.082 1 64.92 ? C13 FBX 701 C 1 HETATM 3 C C15 FBX . . . N 4 167.355 188.929 154.166 1 64.92 ? C15 FBX 701 C 1 HETATM 4 C C17 FBX . . . N 4 166.402 189.816 153.673 1 64.92 ? C17 FBX 701 C 1 HETATM 5 C C20 FBX . . . N 4 164.345 182.513 159.908 1 64.92 ? C20 FBX 701 C 1 HETATM 6 C C21 FBX . . . N 4 162.654 181.178 160.949 1 64.92 ? C21 FBX 701 C 1 HETATM 7 C C22 FBX . . . N 4 163.116 181.197 162.41 1 64.92 ? C22 FBX 701 C 1 HETATM 8 C C7 FBX . . . N 4 168.564 187.708 156.046 1 64.92 ? C7 FBX 701 C 1 HETATM 9 C C8 FBX . . . N 4 167.476 186.107 157.724 1 64.92 ? C8 FBX 701 C 1 HETATM 10 C C9 FBX . . . N 4 167.507 188.689 155.535 1 64.92 ? C9 FBX 701 C 1 HETATM 11 C C11 FBX . . . N 4 167.937 184.789 157.678 1 64.92 ? C11 FBX 701 C 1 HETATM 12 C C12 FBX . . . N 4 167.1 183.686 157.974 1 64.92 ? C12 FBX 701 C 1 HETATM 13 C C14 FBX . . . N 4 165.294 185.212 158.377 1 64.92 ? C14 FBX 701 C 1 HETATM 14 C C16 FBX . . . N 4 166.659 189.377 156.409 1 64.92 ? C16 FBX 701 C 1 HETATM 15 C C18 FBX . . . N 4 165.695 190.271 155.951 1 64.92 ? C18 FBX 701 C 1 HETATM 16 C C19 FBX . . . N 4 165.569 190.488 154.574 1 64.92 ? C19 FBX 701 C 1 HETATM 17 F F1 FBX . . . N 4 164.659 191.334 154.122 1 64.92 ? F1 FBX 701 C 1 HETATM 18 N N4 FBX . . . N 4 168.394 187.176 157.409 1 64.92 ? N4 FBX 701 C 1 HETATM 19 N N5 FBX . . . N 4 164.879 182.766 158.638 1 64.92 ? N5 FBX 701 C 1 HETATM 20 N N6 FBX . . . N 4 167.66 182.424 157.896 1 64.92 ? N6 FBX 701 C 1 HETATM 21 O O2 FBX . . . N 4 163.741 181.266 160.024 1 64.92 ? O2 FBX 701 C 1 HETATM 22 O O3 FBX . . . N 4 164.377 183.276 160.858 1 64.92 ? O3 FBX 701 C 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 60 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 14 _model_server_stats.element_count 22 #