data_7BYM # _model_server_result.job_id F33O21pfBHvtMI14KGXHtQ _model_server_result.datetime_utc '2024-11-23 07:18:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7bym # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":705}' # _entry.id 7BYM # _exptl.entry_id 7BYM _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 39.098 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'POTASSIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7BYM _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7BYM _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 K N N ? 5 L N N ? 5 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O THR 567 A THR 283 1_555 M K K . A K 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.194 ? metalc ? metalc2 A O ILE 568 A ILE 284 1_555 L K K . A K 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.654 ? metalc ? metalc3 A O GLY 569 A GLY 285 1_555 K K K . A K 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.045 ? metalc ? metalc4 A O TYR 570 A TYR 286 1_555 K K K . A K 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.122 ? metalc ? metalc5 K K K . A K 703 1_555 B O GLY 569 C GLY 285 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.954 ? metalc ? metalc6 K K K . A K 703 1_555 B O TYR 570 C TYR 286 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.105 ? metalc ? metalc7 K K K . A K 703 1_555 C O GLY 569 E GLY 285 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.696 ? metalc ? metalc8 K K K . A K 703 1_555 C O TYR 570 E TYR 286 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.935 ? metalc ? metalc9 K K K . A K 703 1_555 D O GLY 569 G GLY 285 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.104 ? metalc ? metalc10 K K K . A K 703 1_555 D O TYR 570 G TYR 286 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.123 ? metalc ? metalc11 L K K . A K 704 1_555 B O THR 567 C THR 283 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.453 ? metalc ? metalc12 L K K . A K 704 1_555 B O ILE 568 C ILE 284 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.605 ? metalc ? metalc13 L K K . A K 704 1_555 C O THR 567 E THR 283 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.28 ? metalc ? metalc14 L K K . A K 704 1_555 C O ILE 568 E ILE 284 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.511 ? metalc ? metalc15 L K K . A K 704 1_555 D O ILE 568 G ILE 284 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.709 ? metalc ? metalc16 M K K . A K 705 1_555 B O THR 567 C THR 283 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.063 ? metalc ? metalc17 M K K . A K 705 1_555 C O THR 567 E THR 283 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.972 ? metalc ? metalc18 M K K . A K 705 1_555 C OG1 THR 567 E THR 283 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.341 ? metalc ? metalc19 M K K . A K 705 1_555 D O THR 567 G THR 283 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.2 ? # _chem_comp.formula 'K 1' _chem_comp.formula_weight 39.098 _chem_comp.id K _chem_comp.mon_nstd_flag . _chem_comp.name 'POTASSIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7BYM _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 PT5 A 1 701 701 PT5 PT5 . J 4 FBX A 1 702 702 FBX LIG . K 5 K A 1 703 1 K K . L 5 K A 1 704 3 K K . M 5 K A 1 705 4 K K . N 4 FBX C 1 701 702 FBX LIG . O 3 PT5 C 1 702 701 PT5 PT5 . P 4 FBX E 1 701 702 FBX LIG . Q 3 PT5 E 1 702 701 PT5 PT5 . R 4 FBX G 1 701 702 FBX LIG . S 3 PT5 G 1 702 701 PT5 PT5 . T 6 HOH A 1 801 703 HOH HOH . U 6 HOH C 1 801 703 HOH HOH . V 6 HOH E 1 801 703 HOH HOH . W 6 HOH G 1 801 703 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol K _atom_site.label_atom_id K _atom_site.label_comp_id K _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id M _atom_site.label_entity_id 5 _atom_site.Cartn_x 173.922 _atom_site.Cartn_y 173.89 _atom_site.Cartn_z 151.069 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 30 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id K _atom_site.auth_comp_id K _atom_site.auth_seq_id 705 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 54 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #