data_7C1S # _model_server_result.job_id Ai7G-yXiaHmNa1GBqu_0QQ _model_server_result.datetime_utc '2024-11-29 18:04:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7c1s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 7C1S # _exptl.entry_id 7C1S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 893.73 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'OCTANOYL-COENZYME A' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7C1S _cell.length_a 52.828 _cell.length_b 72.386 _cell.length_c 108.582 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7C1S _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C29 H50 N7 O17 P3 S' _chem_comp.formula_weight 893.73 _chem_comp.id CO8 _chem_comp.mon_nstd_flag . _chem_comp.name 'OCTANOYL-COENZYME A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A CO8 sing 70 n y N1A C6A CO8 doub 71 n y C2A N3A CO8 doub 72 n y C2A H2A CO8 sing 73 n n N3A C4A CO8 sing 74 n y C4A C5A CO8 doub 75 n y C4A N9A CO8 sing 76 n y C5A C6A CO8 sing 77 n y C5A N7A CO8 sing 78 n y C6A N6A CO8 sing 79 n n N6A H61A CO8 sing 80 n n N6A H62A CO8 sing 81 n n N7A C8A CO8 doub 82 n y C8A N9A CO8 sing 83 n y C8A H8A CO8 sing 84 n n N9A C1B CO8 sing 85 n n C1B C2B CO8 sing 86 n n C1B O4B CO8 sing 87 n n C1B H1B CO8 sing 88 n n C2B O2B CO8 sing 89 n n C2B C3B CO8 sing 90 n n C2B H2B CO8 sing 91 n n O2B HO2A CO8 sing 92 n n C3B O3B CO8 sing 93 n n C3B C4B CO8 sing 94 n n C3B H3B CO8 sing 95 n n O3B P3B CO8 sing 96 n n P3B O7A CO8 doub 97 n n P3B O8A CO8 sing 98 n n P3B O9A CO8 sing 99 n n O8A HOA8 CO8 sing 100 n n O9A HOA9 CO8 sing 101 n n C4B O4B CO8 sing 102 n n C4B C5B CO8 sing 103 n n C4B H4B CO8 sing 104 n n C5B O5B CO8 sing 105 n n C5B H51A CO8 sing 106 n n C5B H52A CO8 sing 107 n n O5B P1A CO8 sing 108 n n P1A O1A CO8 doub 109 n n P1A O2A CO8 sing 110 n n P1A O3A CO8 sing 111 n n O2A HOA2 CO8 sing 112 n n O3A P2A CO8 sing 113 n n P2A O4A CO8 doub 114 n n P2A O5A CO8 sing 115 n n P2A O6A CO8 sing 116 n n O5A HOA5 CO8 sing 117 n n O6A CCP CO8 sing 118 n n CBP CCP CO8 sing 119 n n CBP CDP CO8 sing 120 n n CBP CEP CO8 sing 121 n n CBP CAP CO8 sing 122 n n CCP H121 CO8 sing 123 n n CCP H122 CO8 sing 124 n n CDP H131 CO8 sing 125 n n CDP H132 CO8 sing 126 n n CDP H133 CO8 sing 127 n n CEP H141 CO8 sing 128 n n CEP H142 CO8 sing 129 n n CEP H143 CO8 sing 130 n n CAP OAP CO8 sing 131 n n CAP C9P CO8 sing 132 n n CAP H10 CO8 sing 133 n n OAP HO1 CO8 sing 134 n n C9P O9P CO8 doub 135 n n C9P N8P CO8 sing 136 n n N8P C7P CO8 sing 137 n n N8P HN8 CO8 sing 138 n n C7P C6P CO8 sing 139 n n C7P H71 CO8 sing 140 n n C7P H72 CO8 sing 141 n n C6P C5P CO8 sing 142 n n C6P H61 CO8 sing 143 n n C6P H62 CO8 sing 144 n n C5P O5P CO8 doub 145 n n C5P N4P CO8 sing 146 n n N4P C3P CO8 sing 147 n n N4P HN4 CO8 sing 148 n n C3P C2P CO8 sing 149 n n C3P H31 CO8 sing 150 n n C3P H32 CO8 sing 151 n n C2P S1P CO8 sing 152 n n C2P H21 CO8 sing 153 n n C2P H22 CO8 sing 154 n n S1P C1' CO8 sing 155 n n C1' O1' CO8 doub 156 n n C1' C2' CO8 sing 157 n n C2' C3' CO8 sing 158 n n C2' "H2'1" CO8 sing 159 n n C2' "H2'2" CO8 sing 160 n n C3' C4' CO8 sing 161 n n C3' "H3'1" CO8 sing 162 n n C3' "H3'2" CO8 sing 163 n n C4' C5' CO8 sing 164 n n C4' "H4'1" CO8 sing 165 n n C4' "H4'2" CO8 sing 166 n n C5' C6' CO8 sing 167 n n C5' "H5'1" CO8 sing 168 n n C5' "H5'2" CO8 sing 169 n n C6' C7' CO8 sing 170 n n C6' "H6'1" CO8 sing 171 n n C6' "H6'2" CO8 sing 172 n n C7' C8' CO8 sing 173 n n C7' "H7'1" CO8 sing 174 n n C7' "H7'2" CO8 sing 175 n n C8' "H8'1" CO8 sing 176 n n C8' "H8'2" CO8 sing 177 n n C8' "H8'3" CO8 sing 178 n n # _atom_sites.entry_id 7C1S _atom_sites.fract_transf_matrix[1][1] 0.018929 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013815 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00921 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CO8 A 1 501 1 CO8 CO8 . C 3 FGU A 1 502 1 FGU E7L . D 4 HOH A 1 601 43 HOH HOH . D 4 HOH A 2 602 44 HOH HOH . D 4 HOH A 3 603 64 HOH HOH . D 4 HOH A 4 604 61 HOH HOH . D 4 HOH A 5 605 11 HOH HOH . D 4 HOH A 6 606 35 HOH HOH . D 4 HOH A 7 607 4 HOH HOH . D 4 HOH A 8 608 7 HOH HOH . D 4 HOH A 9 609 36 HOH HOH . D 4 HOH A 10 610 9 HOH HOH . D 4 HOH A 11 611 54 HOH HOH . D 4 HOH A 12 612 45 HOH HOH . D 4 HOH A 13 613 76 HOH HOH . D 4 HOH A 14 614 56 HOH HOH . D 4 HOH A 15 615 89 HOH HOH . D 4 HOH A 16 616 65 HOH HOH . D 4 HOH A 17 617 41 HOH HOH . D 4 HOH A 18 618 74 HOH HOH . D 4 HOH A 19 619 39 HOH HOH . D 4 HOH A 20 620 12 HOH HOH . D 4 HOH A 21 621 6 HOH HOH . D 4 HOH A 22 622 2 HOH HOH . D 4 HOH A 23 623 75 HOH HOH . D 4 HOH A 24 624 16 HOH HOH . D 4 HOH A 25 625 78 HOH HOH . D 4 HOH A 26 626 34 HOH HOH . D 4 HOH A 27 627 10 HOH HOH . D 4 HOH A 28 628 80 HOH HOH . D 4 HOH A 29 629 29 HOH HOH . D 4 HOH A 30 630 21 HOH HOH . D 4 HOH A 31 631 24 HOH HOH . D 4 HOH A 32 632 42 HOH HOH . D 4 HOH A 33 633 59 HOH HOH . D 4 HOH A 34 634 31 HOH HOH . D 4 HOH A 35 635 47 HOH HOH . D 4 HOH A 36 636 22 HOH HOH . D 4 HOH A 37 637 8 HOH HOH . D 4 HOH A 38 638 20 HOH HOH . D 4 HOH A 39 639 67 HOH HOH . D 4 HOH A 40 640 23 HOH HOH . D 4 HOH A 41 641 66 HOH HOH . D 4 HOH A 42 642 26 HOH HOH . D 4 HOH A 43 643 33 HOH HOH . D 4 HOH A 44 644 71 HOH HOH . D 4 HOH A 45 645 63 HOH HOH . D 4 HOH A 46 646 17 HOH HOH . D 4 HOH A 47 647 5 HOH HOH . D 4 HOH A 48 648 3 HOH HOH . D 4 HOH A 49 649 51 HOH HOH . D 4 HOH A 50 650 18 HOH HOH . D 4 HOH A 51 651 73 HOH HOH . D 4 HOH A 52 652 40 HOH HOH . D 4 HOH A 53 653 38 HOH HOH . D 4 HOH A 54 654 58 HOH HOH . D 4 HOH A 55 655 28 HOH HOH . D 4 HOH A 56 656 15 HOH HOH . D 4 HOH A 57 657 19 HOH HOH . D 4 HOH A 58 658 53 HOH HOH . D 4 HOH A 59 659 32 HOH HOH . D 4 HOH A 60 660 30 HOH HOH . D 4 HOH A 61 661 1 HOH HOH . D 4 HOH A 62 662 68 HOH HOH . D 4 HOH A 63 663 62 HOH HOH . D 4 HOH A 64 664 46 HOH HOH . D 4 HOH A 65 665 52 HOH HOH . D 4 HOH A 66 666 57 HOH HOH . D 4 HOH A 67 667 83 HOH HOH . D 4 HOH A 68 668 90 HOH HOH . D 4 HOH A 69 669 69 HOH HOH . D 4 HOH A 70 670 88 HOH HOH . D 4 HOH A 71 671 85 HOH HOH . D 4 HOH A 72 672 27 HOH HOH . D 4 HOH A 73 673 60 HOH HOH . D 4 HOH A 74 674 81 HOH HOH . D 4 HOH A 75 675 55 HOH HOH . D 4 HOH A 76 676 82 HOH HOH . D 4 HOH A 77 677 87 HOH HOH . D 4 HOH A 78 678 49 HOH HOH . D 4 HOH A 79 679 72 HOH HOH . D 4 HOH A 80 680 84 HOH HOH . D 4 HOH A 81 681 70 HOH HOH . D 4 HOH A 82 682 86 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A CO8 . . . B 2 7.551 2.792 31.814 1 95.35 ? N1A CO8 501 A 1 HETATM 2 C C2A CO8 . . . B 2 8.643 3.559 31.86 1 94.72 ? C2A CO8 501 A 1 HETATM 3 N N3A CO8 . . . B 2 9.114 4.286 32.866 1 96.06 ? N3A CO8 501 A 1 HETATM 4 C C4A CO8 . . . B 2 8.328 4.17 33.939 1 94.47 ? C4A CO8 501 A 1 HETATM 5 C C5A CO8 . . . B 2 7.182 3.427 34.045 1 94.27 ? C5A CO8 501 A 1 HETATM 6 C C6A CO8 . . . B 2 6.778 2.712 32.917 1 93.41 ? C6A CO8 501 A 1 HETATM 7 N N6A CO8 . . . B 2 5.708 1.937 32.907 1 92.23 ? N6A CO8 501 A 1 HETATM 8 N N7A CO8 . . . B 2 6.64 3.545 35.313 1 96.11 ? N7A CO8 501 A 1 HETATM 9 C C8A CO8 . . . B 2 7.468 4.343 35.937 1 95.22 ? C8A CO8 501 A 1 HETATM 10 N N9A CO8 . . . B 2 8.486 4.767 35.152 1 92.45 ? N9A CO8 501 A 1 HETATM 11 C C1B CO8 . . . B 2 9.566 5.58 35.57 1 81.81 ? C1B CO8 501 A 1 HETATM 12 C C2B CO8 . . . B 2 10.665 4.652 36.079 1 82.93 ? C2B CO8 501 A 1 HETATM 13 O O2B CO8 . . . B 2 10.945 4.825 37.448 1 78.39 ? O2B CO8 501 A 1 HETATM 14 C C3B CO8 . . . B 2 11.83 4.913 35.126 1 80.3 ? C3B CO8 501 A 1 HETATM 15 O O3B CO8 . . . B 2 13.028 4.941 35.863 1 86.45 ? O3B CO8 501 A 1 HETATM 16 P P3B CO8 . . . B 2 13.761 3.558 35.731 1 93.55 ? P3B CO8 501 A 1 HETATM 17 O O7A CO8 . . . B 2 13.485 2.996 37.075 1 99.75 ? O7A CO8 501 A 1 HETATM 18 O O8A CO8 . . . B 2 13.18 2.718 34.626 1 97.75 -1 O8A CO8 501 A 1 HETATM 19 O O9A CO8 . . . B 2 15.214 3.86 35.523 1 84.6 -1 O9A CO8 501 A 1 HETATM 20 C C4B CO8 . . . B 2 11.51 6.288 34.582 1 72.07 ? C4B CO8 501 A 1 HETATM 21 O O4B CO8 . . . B 2 10.077 6.275 34.465 1 70.26 ? O4B CO8 501 A 1 HETATM 22 C C5B CO8 . . . B 2 12.1 6.606 33.236 1 64.89 ? C5B CO8 501 A 1 HETATM 23 O O5B CO8 . . . B 2 11.568 7.861 32.82 1 54.9 ? O5B CO8 501 A 1 HETATM 24 P P1A CO8 . . . B 2 12.138 8.687 31.645 1 41.62 ? P1A CO8 501 A 1 HETATM 25 O O1A CO8 . . . B 2 12.075 7.878 30.434 1 46.49 ? O1A CO8 501 A 1 HETATM 26 O O2A CO8 . . . B 2 11.486 9.991 31.656 1 44.11 -1 O2A CO8 501 A 1 HETATM 27 O O3A CO8 . . . B 2 13.633 8.883 32.084 1 47.75 ? O3A CO8 501 A 1 HETATM 28 P P2A CO8 . . . B 2 15.054 9.009 31.404 1 43.65 ? P2A CO8 501 A 1 HETATM 29 O O4A CO8 . . . B 2 15.891 7.913 31.893 1 45.7 ? O4A CO8 501 A 1 HETATM 30 O O5A CO8 . . . B 2 14.849 9.082 29.956 1 44.95 -1 O5A CO8 501 A 1 HETATM 31 O O6A CO8 . . . B 2 15.626 10.311 32.045 1 35.68 ? O6A CO8 501 A 1 HETATM 32 C CBP CO8 . . . B 2 15.955 12.65 32.079 1 40.97 ? CBP CO8 501 A 1 HETATM 33 C CCP CO8 . . . B 2 14.936 11.543 31.913 1 32.55 ? CCP CO8 501 A 1 HETATM 34 C CDP CO8 . . . B 2 17.101 12.396 31.112 1 42.62 ? CDP CO8 501 A 1 HETATM 35 C CEP CO8 . . . B 2 16.528 12.579 33.482 1 40.1 ? CEP CO8 501 A 1 HETATM 36 C CAP CO8 . . . B 2 15.385 14.056 31.877 1 39.92 ? CAP CO8 501 A 1 HETATM 37 O OAP CO8 . . . B 2 16.337 15.033 32.122 1 41.44 ? OAP CO8 501 A 1 HETATM 38 C C9P CO8 . . . B 2 14.659 14.376 30.599 1 35.97 ? C9P CO8 501 A 1 HETATM 39 O O9P CO8 . . . B 2 13.576 13.884 30.406 1 38.24 ? O9P CO8 501 A 1 HETATM 40 N N8P CO8 . . . B 2 15.239 15.196 29.748 1 29.67 ? N8P CO8 501 A 1 HETATM 41 C C7P CO8 . . . B 2 14.633 15.594 28.497 1 26.23 ? C7P CO8 501 A 1 HETATM 42 C C6P CO8 . . . B 2 13.54 16.554 28.709 1 23.92 ? C6P CO8 501 A 1 HETATM 43 C C5P CO8 . . . B 2 12.939 17.117 27.452 1 32.9 ? C5P CO8 501 A 1 HETATM 44 O O5P CO8 . . . B 2 12.247 16.445 26.72 1 44.62 ? O5P CO8 501 A 1 HETATM 45 N N4P CO8 . . . B 2 13.198 18.381 27.203 1 26.35 ? N4P CO8 501 A 1 HETATM 46 C C3P CO8 . . . B 2 12.513 19.143 26.198 1 20.51 ? C3P CO8 501 A 1 HETATM 47 C C2P CO8 . . . B 2 11.689 20.197 26.817 1 47.97 ? C2P CO8 501 A 1 HETATM 48 S S1P CO8 . . . B 2 10.384 20.709 25.696 1 39.18 ? S1P CO8 501 A 1 HETATM 49 C C1' CO8 . . . B 2 10.988 22.26 25.132 1 72.52 ? C1' CO8 501 A 1 HETATM 50 O O1' CO8 . . . B 2 11.376 23.134 25.86 1 81.18 ? O1' CO8 501 A 1 HETATM 51 C C2' CO8 . . . B 2 10.974 22.428 23.644 1 89.37 ? C2' CO8 501 A 1 HETATM 52 C C3' CO8 . . . B 2 12.338 22.479 22.987 1 92.22 ? C3' CO8 501 A 1 HETATM 53 C C4' CO8 . . . B 2 12.273 22.11 21.523 1 92.23 ? C4' CO8 501 A 1 HETATM 54 C C5' CO8 . . . B 2 13.44 22.523 20.726 1 94.65 ? C5' CO8 501 A 1 HETATM 55 C C6' CO8 . . . B 2 13.135 23.449 19.594 1 94.55 ? C6' CO8 501 A 1 HETATM 56 C C7' CO8 . . . B 2 13.38 22.842 18.273 1 98 ? C7' CO8 501 A 1 HETATM 57 C C8' CO8 . . . B 2 12.499 23.412 17.216 1 99.85 ? C8' CO8 501 A 1 # _model_server_stats.io_time_ms 109 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 57 #