data_7C44
#
_model_server_result.job_id            h0Gze2KkcDzGDe6PSVCGFg 
_model_server_result.datetime_utc      '2025-01-11 02:08:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7c44 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":201}' 
#
_entry.id    7C44 
#
_exptl.entry_id    7C44 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              581.49 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            4-({(4S,5R)-4,5-bis(4-chlorophenyl)-2-[4-methoxy-2-(propan-2-yloxy)phenyl]-4,5-dihydro-1H-imidazol-1-yl}carbonyl)piperazin-2-one 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7C44 
_cell.length_a            47.47 
_cell.length_b            47.47 
_cell.length_c            91.19 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7C44 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C30 H30 Cl2 N4 O4' 
_chem_comp.formula_weight    581.49 
_chem_comp.id                NUT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              4-({(4S,5R)-4,5-bis(4-chlorophenyl)-2-[4-methoxy-2-(propan-2-yloxy)phenyl]-4,5-dihydro-1H-imidazol-1-yl}carbonyl)piperazin-2-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'Nutlin 3a' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O2 C28 NUT doub 237 n n 
C28 C29 NUT sing 238 n n 
C28 N3 NUT sing 239 n n 
C29 N2 NUT sing 240 n n 
O3 C25 NUT doub 241 n n 
N3 C27 NUT sing 242 n n 
C25 N2 NUT sing 243 n n 
C25 N1 NUT sing 244 n n 
N2 C26 NUT sing 245 n n 
C27 C26 NUT sing 246 n n 
C11 C18 NUT sing 247 n n 
C11 N NUT sing 248 n n 
C11 C12 NUT sing 249 n n 
C3 C2 NUT doub 250 n y 
C3 C9 NUT sing 251 n y 
N1 C18 NUT sing 252 n n 
N1 C10 NUT sing 253 n n 
C2 C1 NUT sing 254 n y 
C17 C12 NUT doub 255 n y 
C17 C16 NUT sing 256 n y 
C18 C19 NUT sing 257 n n 
C10 N NUT doub 258 n n 
C10 C9 NUT sing 259 n n 
C9 C5 NUT doub 260 n y 
C O NUT sing 261 n n 
C12 C13 NUT sing 262 n y 
C1 O NUT sing 263 n n 
C1 C4 NUT doub 264 n y 
C16 C15 NUT doub 265 n y 
C5 C4 NUT sing 266 n y 
C5 O1 NUT sing 267 n n 
C8 C6 NUT sing 268 n n 
O1 C6 NUT sing 269 n n 
C19 C24 NUT doub 270 n y 
C19 C20 NUT sing 271 n y 
C24 C23 NUT sing 272 n y 
C13 C14 NUT doub 273 n y 
C15 C14 NUT sing 274 n y 
C15 CL NUT sing 275 n n 
C6 C7 NUT sing 276 n n 
C20 C21 NUT doub 277 n y 
C23 C22 NUT doub 278 n y 
C21 C22 NUT sing 279 n y 
C22 CL1 NUT sing 280 n n 
C29 H1 NUT sing 281 n n 
C29 H2 NUT sing 282 n n 
N3 H3 NUT sing 283 n n 
C27 H4 NUT sing 284 n n 
C27 H5 NUT sing 285 n n 
C26 H6 NUT sing 286 n n 
C26 H7 NUT sing 287 n n 
C3 H9 NUT sing 288 n n 
C2 H10 NUT sing 289 n n 
C6 H11 NUT sing 290 n n 
C8 H12 NUT sing 291 n n 
C8 H13 NUT sing 292 n n 
C8 H14 NUT sing 293 n n 
C7 H15 NUT sing 294 n n 
C7 H16 NUT sing 295 n n 
C7 H17 NUT sing 296 n n 
C4 H18 NUT sing 297 n n 
C H19 NUT sing 298 n n 
C H20 NUT sing 299 n n 
C H21 NUT sing 300 n n 
C18 H22 NUT sing 301 n n 
C24 H23 NUT sing 302 n n 
C23 H24 NUT sing 303 n n 
C21 H25 NUT sing 304 n n 
C20 H26 NUT sing 305 n n 
C11 H27 NUT sing 306 n n 
C17 H30 NUT sing 307 n n 
C16 H31 NUT sing 308 n n 
C14 H32 NUT sing 309 n n 
C13 H33 NUT sing 310 n n 
#
_atom_sites.entry_id                     7C44 
_atom_sites.fract_transf_matrix[1][1]    0.021066 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.021066 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010966 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NUT A 1 201 11 NUT NUT . 
C 3 O4B A 1 202 21 O4B O4B . 
D 4 HOH A 1 301 23 HOH HOH . 
D 4 HOH A 2 302 29 HOH HOH . 
D 4 HOH A 3 303 32 HOH HOH . 
D 4 HOH A 4 304 35 HOH HOH . 
D 4 HOH A 5 305 34 HOH HOH . 
D 4 HOH A 6 306 12 HOH HOH . 
D 4 HOH A 7 307 25 HOH HOH . 
D 4 HOH A 8 308 28 HOH HOH . 
D 4 HOH A 9 309 15 HOH HOH . 
D 4 HOH A 10 310 18 HOH HOH . 
D 4 HOH A 11 311 19 HOH HOH . 
D 4 HOH A 12 312 11 HOH HOH . 
D 4 HOH A 13 313 21 HOH HOH . 
D 4 HOH A 14 314 14 HOH HOH . 
D 4 HOH A 15 315 24 HOH HOH . 
D 4 HOH A 16 316 31 HOH HOH . 
D 4 HOH A 17 317 17 HOH HOH . 
D 4 HOH A 18 318 26 HOH HOH . 
D 4 HOH A 19 319 27 HOH HOH . 
D 4 HOH A 20 320 30 HOH HOH . 
D 4 HOH A 21 321 36 HOH HOH . 
D 4 HOH A 22 322 22 HOH HOH . 
D 4 HOH A 23 323 20 HOH HOH . 
D 4 HOH A 24 324 16 HOH HOH . 
D 4 HOH A 25 325 13 HOH HOH . 
D 4 HOH A 26 326 33 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O3 NUT . . . B 2 9.058 -13.699 -4.714 1 40.6 ? O3 NUT 201 A 1 
HETATM 2 C C25 NUT . . . B 2 8.952 -14.65 -5.47 1 39.03 ? C25 NUT 201 A 1 
HETATM 3 N N2 NUT . . . B 2 8.185 -14.622 -6.595 1 47.02 ? N2 NUT 201 A 1 
HETATM 4 C C29 NUT . . . B 2 7.704 -13.294 -6.958 1 50.23 ? C29 NUT 201 A 1 
HETATM 5 C C28 NUT . . . B 2 7.257 -13.293 -8.382 1 57.98 ? C28 NUT 201 A 1 
HETATM 6 O O2 NUT . . . B 2 7.022 -12.19 -8.909 1 69.35 ? O2 NUT 201 A 1 
HETATM 7 N N3 NUT . . . B 2 7.125 -14.45 -9.036 1 55.74 ? N3 NUT 201 A 1 
HETATM 8 C C27 NUT . . . B 2 7.087 -15.802 -8.483 1 52.55 ? C27 NUT 201 A 1 
HETATM 9 C C26 NUT . . . B 2 7.364 -15.789 -6.999 1 46.79 ? C26 NUT 201 A 1 
HETATM 10 N N1 NUT . . . B 2 9.627 -15.818 -5.178 1 36.13 ? N1 NUT 201 A 1 
HETATM 11 C C10 NUT . . . B 2 10.171 -16.746 -6.068 1 35.74 ? C10 NUT 201 A 1 
HETATM 12 C C9 NUT . . . B 2 10.377 -16.536 -7.508 1 38.34 ? C9 NUT 201 A 1 
HETATM 13 C C3 NUT . . . B 2 10.111 -17.606 -8.367 1 41.16 ? C3 NUT 201 A 1 
HETATM 14 C C2 NUT . . . B 2 10.341 -17.482 -9.722 1 42.3 ? C2 NUT 201 A 1 
HETATM 15 C C5 NUT . . . B 2 10.933 -15.366 -8.019 1 37.3 ? C5 NUT 201 A 1 
HETATM 16 O O1 NUT . . . B 2 11.214 -14.395 -7.098 1 36.94 ? O1 NUT 201 A 1 
HETATM 17 C C6 NUT . . . B 2 11.709 -13.082 -7.461 1 36.46 ? C6 NUT 201 A 1 
HETATM 18 C C8 NUT . . . B 2 13.184 -13.164 -7.779 1 35.73 ? C8 NUT 201 A 1 
HETATM 19 C C7 NUT . . . B 2 11.44 -12.207 -6.256 1 34.96 ? C7 NUT 201 A 1 
HETATM 20 C C4 NUT . . . B 2 11.157 -15.219 -9.387 1 38.66 ? C4 NUT 201 A 1 
HETATM 21 C C1 NUT . . . B 2 10.875 -16.3 -10.232 1 41.69 ? C1 NUT 201 A 1 
HETATM 22 O O NUT . . . B 2 11.072 -16.169 -11.577 1 46.99 ? O NUT 201 A 1 
HETATM 23 C C NUT . . . B 2 11.121 -17.356 -12.386 1 45.93 ? C NUT 201 A 1 
HETATM 24 C C18 NUT . . . B 2 9.898 -16.189 -3.839 1 35.31 ? C18 NUT 201 A 1 
HETATM 25 C C19 NUT . . . B 2 11.048 -15.447 -3.193 1 31.14 ? C19 NUT 201 A 1 
HETATM 26 C C24 NUT . . . B 2 12.202 -15.156 -3.897 1 33.13 ? C24 NUT 201 A 1 
HETATM 27 C C23 NUT . . . B 2 13.276 -14.559 -3.271 1 31.56 ? C23 NUT 201 A 1 
HETATM 28 C C22 NUT . . . B 2 13.172 -14.258 -1.943 1 29.8 ? C22 NUT 201 A 1 
HETATM 29 CL CL1 NUT . . . B 2 14.527 -13.546 -1.114 1 31.2 ? CL1 NUT 201 A 1 
HETATM 30 C C21 NUT . . . B 2 12.056 -14.542 -1.214 1 32.72 ? C21 NUT 201 A 1 
HETATM 31 C C20 NUT . . . B 2 11.001 -15.167 -1.845 1 31.37 ? C20 NUT 201 A 1 
HETATM 32 C C11 NUT . . . B 2 10.142 -17.713 -4.067 1 34.24 ? C11 NUT 201 A 1 
HETATM 33 N N NUT . . . B 2 10.497 -17.84 -5.488 1 35.36 ? N NUT 201 A 1 
HETATM 34 C C12 NUT . . . B 2 11.163 -18.346 -3.155 1 33.85 ? C12 NUT 201 A 1 
HETATM 35 C C17 NUT . . . B 2 12.485 -18.542 -3.534 1 37.56 ? C17 NUT 201 A 1 
HETATM 36 C C16 NUT . . . B 2 13.394 -19.124 -2.657 1 37.55 ? C16 NUT 201 A 1 
HETATM 37 C C15 NUT . . . B 2 12.971 -19.482 -1.395 1 38.2 ? C15 NUT 201 A 1 
HETATM 38 CL CL NUT . . . B 2 14.036 -20.191 -0.231 1 40.61 ? CL NUT 201 A 1 
HETATM 39 C C14 NUT . . . B 2 11.679 -19.278 -1.001 1 36.93 ? C14 NUT 201 A 1 
HETATM 40 C C13 NUT . . . B 2 10.799 -18.684 -1.874 1 32.8 ? C13 NUT 201 A 1 
HETATM 41 H H1 NUT . . . B 2 6.939 -13.05 -6.396 1 50.23 ? H1 NUT 201 A 1 
HETATM 42 H H2 NUT . . . B 2 8.426 -12.639 -6.863 1 50.23 ? H2 NUT 201 A 1 
HETATM 43 H H3 NUT . . . B 2 7.056 -14.373 -9.879 1 55.74 ? H3 NUT 201 A 1 
HETATM 44 H H4 NUT . . . B 2 7.772 -16.361 -8.928 1 52.55 ? H4 NUT 201 A 1 
HETATM 45 H H5 NUT . . . B 2 6.192 -16.197 -8.634 1 52.55 ? H5 NUT 201 A 1 
HETATM 46 H H6 NUT . . . B 2 6.509 -15.768 -6.524 1 46.79 ? H6 NUT 201 A 1 
HETATM 47 H H7 NUT . . . B 2 7.831 -16.615 -6.763 1 46.79 ? H7 NUT 201 A 1 
HETATM 48 H H9 NUT . . . B 2 9.774 -18.415 -8.023 1 41.16 ? H9 NUT 201 A 1 
HETATM 49 H H10 NUT . . . B 2 10.155 -18.203 -10.298 1 42.3 ? H10 NUT 201 A 1 
HETATM 50 H H11 NUT . . . B 2 11.226 -12.757 -8.272 1 36.46 ? H11 NUT 201 A 1 
HETATM 51 H H12 NUT . . . B 2 13.516 -12.281 -8.023 1 35.73 ? H12 NUT 201 A 1 
HETATM 52 H H13 NUT . . . B 2 13.324 -13.775 -8.519 1 35.73 ? H13 NUT 201 A 1 
HETATM 53 H H14 NUT . . . B 2 13.667 -13.485 -7.002 1 35.73 ? H14 NUT 201 A 1 
HETATM 54 H H15 NUT . . . B 2 11.012 -12.734 -5.558 1 34.96 ? H15 NUT 201 A 1 
HETATM 55 H H16 NUT . . . B 2 10.856 -11.475 -6.509 1 34.96 ? H16 NUT 201 A 1 
HETATM 56 H H17 NUT . . . B 2 12.277 -11.849 -5.92 1 34.96 ? H17 NUT 201 A 1 
HETATM 57 H H18 NUT . . . B 2 11.532 -14.43 -9.731 1 38.66 ? H18 NUT 201 A 1 
HETATM 58 H H19 NUT . . . B 2 10.281 -17.837 -12.305 1 45.93 ? H19 NUT 201 A 1 
HETATM 59 H H20 NUT . . . B 2 11.849 -17.922 -12.085 1 45.93 ? H20 NUT 201 A 1 
HETATM 60 H H21 NUT . . . B 2 11.265 -17.109 -13.313 1 45.93 ? H21 NUT 201 A 1 
HETATM 61 H H22 NUT . . . B 2 9.104 -16.065 -3.264 1 35.31 ? H22 NUT 201 A 1 
HETATM 62 H H23 NUT . . . B 2 12.26 -15.365 -4.812 1 33.13 ? H23 NUT 201 A 1 
HETATM 63 H H24 NUT . . . B 2 14.058 -14.351 -3.747 1 31.56 ? H24 NUT 201 A 1 
HETATM 64 H H25 NUT . . . B 2 12.017 -14.354 -0.295 1 32.72 ? H25 NUT 201 A 1 
HETATM 65 H H26 NUT . . . B 2 10.256 -15.439 -1.34 1 31.37 ? H26 NUT 201 A 1 
HETATM 66 H H27 NUT . . . B 2 9.29 -18.196 -3.924 1 34.24 ? H27 NUT 201 A 1 
HETATM 67 H H30 NUT . . . B 2 12.774 -18.28 -4.392 1 37.56 ? H30 NUT 201 A 1 
HETATM 68 H H31 NUT . . . B 2 14.286 -19.26 -2.917 1 37.55 ? H31 NUT 201 A 1 
HETATM 69 H H32 NUT . . . B 2 11.401 -19.517 -0.137 1 36.93 ? H32 NUT 201 A 1 
HETATM 70 H H33 NUT . . . B 2 9.906 -18.542 -1.605 1 32.8 ? H33 NUT 201 A 1 
#
_model_server_stats.io_time_ms              97 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           314 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           70 
#