data_7C61 # _model_server_result.job_id yb8mP779t6_00rdUsiR6UA _model_server_result.datetime_utc '2024-11-26 17:10:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7c61 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":2001}' # _entry.id 7C61 # _exptl.entry_id 7C61 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 581.661 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Ergotamine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.79 _cell.angle_gamma 90 _cell.entry_id 7C61 _cell.length_a 248.8 _cell.length_b 65.7 _cell.length_c 79.73 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7C61 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 L CYS 23 1_555 A SG CYS 88 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? disulf ? disulf2 A SG CYS 134 L CYS 134 1_555 A SG CYS 194 L CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? disulf ? disulf3 B SG CYS 22 H CYS 22 1_555 B SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf4 B SG CYS 146 H CYS 146 1_555 B SG CYS 201 H CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf5 C SG CYS 91 A CYS 122 1_555 C SG CYS 168 A CYS 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf6 C SG CYS 349 A CYS 380 1_555 C SG CYS 353 A CYS 384 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? # _chem_comp.formula 'C33 H35 N5 O5' _chem_comp.formula_weight 581.661 _chem_comp.id ERM _chem_comp.mon_nstd_flag . _chem_comp.name Ergotamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C23 C22 ERM sing 83 n n C23 C24 ERM sing 84 n n C26 C17 ERM sing 85 n n C22 C21 ERM sing 86 n n O2 C17 ERM sing 87 n n O2 C25 ERM sing 88 n n C24 C25 ERM sing 89 n n C24 N5 ERM sing 90 n n C21 N5 ERM sing 91 n n C17 N3 ERM sing 92 n n C17 C18 ERM sing 93 n n C25 O5 ERM sing 94 n n C25 N4 ERM sing 95 n n N3 C16 ERM sing 96 n n N5 C20 ERM sing 97 n n C5 N2 ERM sing 98 n n C5 C6 ERM sing 99 n n C15 N2 ERM sing 100 n n C18 N4 ERM sing 101 n n C18 O3 ERM doub 102 n n C16 C6 ERM sing 103 n n C16 O1 ERM doub 104 n n N4 C19 ERM sing 105 n n N2 C4 ERM sing 106 n n C6 C7 ERM sing 107 n n C20 O4 ERM doub 108 n n C20 C19 ERM sing 109 n n C19 C27 ERM sing 110 n n C7 C8 ERM doub 111 n n C4 C3 ERM sing 112 n n C4 C8 ERM sing 113 n n C3 C2 ERM sing 114 n n C8 C9 ERM sing 115 n n C27 C28 ERM sing 116 n n C2 C1 ERM doub 117 n y C2 C14 ERM sing 118 n y C28 C29 ERM doub 119 n y C28 C33 ERM sing 120 n y C9 C14 ERM doub 121 n y C9 C10 ERM sing 122 n y C29 C30 ERM sing 123 n y C33 C32 ERM doub 124 n y C1 N1 ERM sing 125 n y C14 C13 ERM sing 126 n y C30 C31 ERM doub 127 n y C10 C11 ERM doub 128 n y C32 C31 ERM sing 129 n y N1 C13 ERM sing 130 n y C13 C12 ERM doub 131 n y C11 C12 ERM sing 132 n y C1 H1 ERM sing 133 n n N1 H2 ERM sing 134 n n C10 H3 ERM sing 135 n n C11 H4 ERM sing 136 n n C12 H5 ERM sing 137 n n C15 H6 ERM sing 138 n n C15 H7 ERM sing 139 n n C15 H8 ERM sing 140 n n C19 H9 ERM sing 141 n n C21 H11 ERM sing 142 n n C21 H12 ERM sing 143 n n C22 H13 ERM sing 144 n n C22 H14 ERM sing 145 n n C23 H15 ERM sing 146 n n C23 H16 ERM sing 147 n n C24 H17 ERM sing 148 n n C26 H18 ERM sing 149 n n C26 H19 ERM sing 150 n n C26 H20 ERM sing 151 n n C27 H21 ERM sing 152 n n C27 H22 ERM sing 153 n n C29 H23 ERM sing 154 n n C3 H24 ERM sing 155 n n C3 H25 ERM sing 156 n n N3 H26 ERM sing 157 n n C30 H27 ERM sing 158 n n C31 H28 ERM sing 159 n n C32 H29 ERM sing 160 n n C33 H30 ERM sing 161 n n C4 H31 ERM sing 162 n n C5 H32 ERM sing 163 n n C5 H33 ERM sing 164 n n O5 H34 ERM sing 165 n n C6 H35 ERM sing 166 n n C7 H36 ERM sing 167 n n # _atom_sites.entry_id 7C61 _atom_sites.fract_transf_matrix[1][1] 0.004019 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000622 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015221 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012692 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id D _pdbx_nonpoly_scheme.entity_id 4 _pdbx_nonpoly_scheme.mon_id ERM _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 2001 _pdbx_nonpoly_scheme.auth_seq_num 2001 _pdbx_nonpoly_scheme.pdb_mon_id ERM _pdbx_nonpoly_scheme.auth_mon_id ERM _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 ERM . . . D 4 -19.17 -5.506 104.434 1 274.08 ? C1 ERM 2001 A 1 HETATM 2 N N1 ERM . . . D 4 -19.786 -5.942 105.566 1 273.48 ? N1 ERM 2001 A 1 HETATM 3 O O1 ERM . . . D 4 -25.519 -3.109 100.432 1 288.6 ? O1 ERM 2001 A 1 HETATM 4 C C10 ERM . . . D 4 -23.707 -5.664 104.308 1 279.03 ? C10 ERM 2001 A 1 HETATM 5 C C11 ERM . . . D 4 -23.51 -6.126 105.616 1 277.51 ? C11 ERM 2001 A 1 HETATM 6 C C12 ERM . . . D 4 -22.226 -6.26 106.153 1 275.32 ? C12 ERM 2001 A 1 HETATM 7 C C13 ERM . . . D 4 -21.129 -5.929 105.37 1 274.88 ? C13 ERM 2001 A 1 HETATM 8 C C14 ERM . . . D 4 -21.357 -5.476 104.088 1 276.41 ? C14 ERM 2001 A 1 HETATM 9 C C15 ERM . . . D 4 -20.331 -3.035 99.682 1 281.64 ? C15 ERM 2001 A 1 HETATM 10 C C16 ERM . . . D 4 -25.078 -3.912 99.621 1 288.75 ? C16 ERM 2001 A 1 HETATM 11 C C17 ERM . . . D 4 -27.053 -3.762 98.122 1 293.9 ? C17 ERM 2001 A 1 HETATM 12 C C18 ERM . . . D 4 -27.941 -3.683 99.336 1 293.29 ? C18 ERM 2001 A 1 HETATM 13 C C19 ERM . . . D 4 -29.504 -2.062 100.321 1 294.61 ? C19 ERM 2001 A 1 HETATM 14 N N2 ERM . . . D 4 -21.385 -3.959 100.145 1 282.27 ? N2 ERM 2001 A 1 HETATM 15 C C2 ERM . . . D 4 -20.161 -5.211 103.504 1 276.13 ? C2 ERM 2001 A 1 HETATM 16 O O2 ERM . . . D 4 -27.024 -2.405 97.665 1 294.21 ? O2 ERM 2001 A 1 HETATM 17 C C20 ERM . . . D 4 -30.366 -0.993 99.712 1 296.96 ? C20 ERM 2001 A 1 HETATM 18 C C21 ERM . . . D 4 -30.166 1.189 98.521 1 298.68 ? C21 ERM 2001 A 1 HETATM 19 C C22 ERM . . . D 4 -29.209 1.645 97.427 1 299.01 ? C22 ERM 2001 A 1 HETATM 20 C C23 ERM . . . D 4 -28.478 0.414 96.909 1 298.7 ? C23 ERM 2001 A 1 HETATM 21 C C24 ERM . . . D 4 -28.937 -0.785 97.741 1 297.89 ? C24 ERM 2001 A 1 HETATM 22 C C25 ERM . . . D 4 -27.818 -1.533 98.476 1 294.3 ? C25 ERM 2001 A 1 HETATM 23 C C26 ERM . . . D 4 -27.685 -4.635 97.045 1 297.1 ? C26 ERM 2001 A 1 HETATM 24 C C27 ERM . . . D 4 -28.871 -1.536 101.605 1 291.65 ? C27 ERM 2001 A 1 HETATM 25 C C28 ERM . . . D 4 -28.808 -2.576 102.695 1 290.76 ? C28 ERM 2001 A 1 HETATM 26 C C29 ERM . . . D 4 -27.58 -2.816 103.328 1 287.87 ? C29 ERM 2001 A 1 HETATM 27 C C3 ERM . . . D 4 -20.078 -4.702 102.085 1 278.07 ? C3 ERM 2001 A 1 HETATM 28 N N3 ERM . . . D 4 -25.729 -4.27 98.497 1 291.8 ? N3 ERM 2001 A 1 HETATM 29 O O3 ERM . . . D 4 -28.153 -4.612 100.103 1 292.5 ? O3 ERM 2001 A 1 HETATM 30 C C30 ERM . . . D 4 -27.483 -3.768 104.337 1 286.85 ? C30 ERM 2001 A 1 HETATM 31 C C31 ERM . . . D 4 -28.624 -4.469 104.718 1 289.02 ? C31 ERM 2001 A 1 HETATM 32 C C32 ERM . . . D 4 -29.854 -4.231 104.087 1 292.04 ? C32 ERM 2001 A 1 HETATM 33 C C33 ERM . . . D 4 -29.953 -3.28 103.076 1 292.84 ? C33 ERM 2001 A 1 HETATM 34 C C4 ERM . . . D 4 -21.4 -4.063 101.623 1 279.57 ? C4 ERM 2001 A 1 HETATM 35 N N4 ERM . . . D 4 -28.42 -2.456 99.427 1 293.84 ? N4 ERM 2001 A 1 HETATM 36 O O4 ERM . . . D 4 -31.489 -0.857 100.127 1 298.25 ? O4 ERM 2001 A 1 HETATM 37 C C5 ERM . . . D 4 -22.672 -3.461 99.66 1 284.36 ? C5 ERM 2001 A 1 HETATM 38 N N5 ERM . . . D 4 -29.871 -0.23 98.734 1 297.83 ? N5 ERM 2001 A 1 HETATM 39 O O5 ERM . . . D 4 -26.959 -0.601 99.132 1 291.37 ? O5 ERM 2001 A 1 HETATM 40 C C6 ERM . . . D 4 -23.728 -4.525 99.891 1 286.11 ? C6 ERM 2001 A 1 HETATM 41 C C7 ERM . . . D 4 -23.663 -5.047 101.315 1 283.54 ? C7 ERM 2001 A 1 HETATM 42 C C8 ERM . . . D 4 -22.61 -4.828 102.118 1 280.47 ? C8 ERM 2001 A 1 HETATM 43 C C9 ERM . . . D 4 -22.599 -5.337 103.534 1 278.49 ? C9 ERM 2001 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 43 #