data_7C6R
#
_model_server_result.job_id            cJ4jTr2o7KQpeQ4HXTvKxg 
_model_server_result.datetime_utc      '2025-01-12 07:47:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7c6r 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":502}' 
#
_entry.id    7C6R 
#
_exptl.entry_id    7C6R 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7C6R 
_cell.length_a            58.23 
_cell.length_b            63.23 
_cell.length_c            110.08 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7C6R 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_pdbx_entity_branch.entity_id    2 
_pdbx_entity_branch.type         oligosaccharide 
#
loop_
_pdbx_entity_branch_link.link_id
_pdbx_entity_branch_link.details
_pdbx_entity_branch_link.entity_id
_pdbx_entity_branch_link.entity_branch_list_num_1
_pdbx_entity_branch_link.entity_branch_list_num_2
_pdbx_entity_branch_link.comp_id_1
_pdbx_entity_branch_link.comp_id_2
_pdbx_entity_branch_link.atom_id_1
_pdbx_entity_branch_link.leaving_atom_id_1
_pdbx_entity_branch_link.atom_stereo_config_1
_pdbx_entity_branch_link.atom_id_2
_pdbx_entity_branch_link.leaving_atom_id_2
_pdbx_entity_branch_link.atom_stereo_config_2
_pdbx_entity_branch_link.value_order
1 ? 2 2 1 BGC BGC C1 O1 . O4 HO4 . sing 
2 ? 2 3 2 BGC BGC C1 O1 . O4 HO4 . sing 
3 ? 2 4 3 BGC BGC C1 O1 . O4 HO4 . sing 
4 ? 2 5 4 BGC BGC C1 O1 . O4 HO4 . sing 
#
loop_
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.hetero
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.auth_mon_id
2 n B BGC 1 B 1 BGC B 4 CE5 
2 n B BGC 2 B 2 BGC B 4 CE5 
2 n B BGC 3 B 3 BGC B 4 CE5 
2 n B BGC 4 B 4 BGC B 4 CE5 
2 n B BGC 5 B 5 BGC B 4 CE5 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 171 A CYS 170 1_555 A SG CYS 248 A CYS 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? 
covale ? covale1 B O4 BGC . B BGC 1 1_555 B C1 BGC . B BGC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.402 sing 
covale ? covale2 B O4 BGC . B BGC 2 1_555 B C1 BGC . B BGC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.407 sing 
covale ? covale3 B O4 BGC . B BGC 3 1_555 B C1 BGC . B BGC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.401 sing 
covale ? covale4 B O4 BGC . B BGC 4 1_555 B C1 BGC . B BGC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.404 sing 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 107 n n 
C1 C2 EDO sing 108 n n 
C1 H11 EDO sing 109 n n 
C1 H12 EDO sing 110 n n 
O1 HO1 EDO sing 111 n n 
C2 O2 EDO sing 112 n n 
C2 H21 EDO sing 113 n n 
C2 H22 EDO sing 114 n n 
O2 HO2 EDO sing 115 n n 
#
_atom_sites.entry_id                     7C6R 
_atom_sites.fract_transf_matrix[1][1]    0.017173 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015815 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009084 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 CL A 1 501 1 CL CL . 
D 4 EDO A 1 502 2 EDO EDO . 
E 5 SO4 A 1 503 3 SO4 SO4 . 
F 6 HOH A 1 601 36 HOH HOH . 
F 6 HOH A 2 602 49 HOH HOH . 
F 6 HOH A 3 603 43 HOH HOH . 
F 6 HOH A 4 604 55 HOH HOH . 
F 6 HOH A 5 605 53 HOH HOH . 
F 6 HOH A 6 606 86 HOH HOH . 
F 6 HOH A 7 607 28 HOH HOH . 
F 6 HOH A 8 608 65 HOH HOH . 
F 6 HOH A 9 609 8 HOH HOH . 
F 6 HOH A 10 610 31 HOH HOH . 
F 6 HOH A 11 611 67 HOH HOH . 
F 6 HOH A 12 612 11 HOH HOH . 
F 6 HOH A 13 613 54 HOH HOH . 
F 6 HOH A 14 614 23 HOH HOH . 
F 6 HOH A 15 615 63 HOH HOH . 
F 6 HOH A 16 616 1 HOH HOH . 
F 6 HOH A 17 617 41 HOH HOH . 
F 6 HOH A 18 618 14 HOH HOH . 
F 6 HOH A 19 619 47 HOH HOH . 
F 6 HOH A 20 620 51 HOH HOH . 
F 6 HOH A 21 621 29 HOH HOH . 
F 6 HOH A 22 622 59 HOH HOH . 
F 6 HOH A 23 623 16 HOH HOH . 
F 6 HOH A 24 624 7 HOH HOH . 
F 6 HOH A 25 625 3 HOH HOH . 
F 6 HOH A 26 626 26 HOH HOH . 
F 6 HOH A 27 627 10 HOH HOH . 
F 6 HOH A 28 628 17 HOH HOH . 
F 6 HOH A 29 629 25 HOH HOH . 
F 6 HOH A 30 630 5 HOH HOH . 
F 6 HOH A 31 631 32 HOH HOH . 
F 6 HOH A 32 632 19 HOH HOH . 
F 6 HOH A 33 633 13 HOH HOH . 
F 6 HOH A 34 634 35 HOH HOH . 
F 6 HOH A 35 635 60 HOH HOH . 
F 6 HOH A 36 636 12 HOH HOH . 
F 6 HOH A 37 637 40 HOH HOH . 
F 6 HOH A 38 638 21 HOH HOH . 
F 6 HOH A 39 639 18 HOH HOH . 
F 6 HOH A 40 640 89 HOH HOH . 
F 6 HOH A 41 641 4 HOH HOH . 
F 6 HOH A 42 642 87 HOH HOH . 
F 6 HOH A 43 643 52 HOH HOH . 
F 6 HOH A 44 644 34 HOH HOH . 
F 6 HOH A 45 645 27 HOH HOH . 
F 6 HOH A 46 646 90 HOH HOH . 
F 6 HOH A 47 647 92 HOH HOH . 
F 6 HOH A 48 648 69 HOH HOH . 
F 6 HOH A 49 649 44 HOH HOH . 
F 6 HOH A 50 650 48 HOH HOH . 
F 6 HOH A 51 651 33 HOH HOH . 
F 6 HOH A 52 652 2 HOH HOH . 
F 6 HOH A 53 653 6 HOH HOH . 
F 6 HOH A 54 654 9 HOH HOH . 
F 6 HOH A 55 655 24 HOH HOH . 
F 6 HOH A 56 656 80 HOH HOH . 
F 6 HOH A 57 657 22 HOH HOH . 
F 6 HOH A 58 658 62 HOH HOH . 
F 6 HOH A 59 659 37 HOH HOH . 
F 6 HOH A 60 660 78 HOH HOH . 
F 6 HOH A 61 661 82 HOH HOH . 
F 6 HOH A 62 662 15 HOH HOH . 
F 6 HOH A 63 663 81 HOH HOH . 
F 6 HOH A 64 664 39 HOH HOH . 
F 6 HOH A 65 665 77 HOH HOH . 
F 6 HOH A 66 666 71 HOH HOH . 
F 6 HOH A 67 667 75 HOH HOH . 
F 6 HOH A 68 668 20 HOH HOH . 
F 6 HOH A 69 669 61 HOH HOH . 
F 6 HOH A 70 670 79 HOH HOH . 
F 6 HOH A 71 671 66 HOH HOH . 
F 6 HOH A 72 672 30 HOH HOH . 
F 6 HOH A 73 673 50 HOH HOH . 
F 6 HOH A 74 674 91 HOH HOH . 
F 6 HOH A 75 675 94 HOH HOH . 
F 6 HOH A 76 676 72 HOH HOH . 
F 6 HOH A 77 677 76 HOH HOH . 
F 6 HOH A 78 678 73 HOH HOH . 
F 6 HOH A 79 679 38 HOH HOH . 
F 6 HOH A 80 680 58 HOH HOH . 
F 6 HOH A 81 681 70 HOH HOH . 
F 6 HOH A 82 682 64 HOH HOH . 
F 6 HOH A 83 683 88 HOH HOH . 
F 6 HOH A 84 684 93 HOH HOH . 
F 6 HOH A 85 685 74 HOH HOH . 
F 6 HOH A 86 686 85 HOH HOH . 
F 6 HOH A 87 687 42 HOH HOH . 
F 6 HOH A 88 688 56 HOH HOH . 
F 6 HOH A 89 689 84 HOH HOH . 
F 6 HOH A 90 690 57 HOH HOH . 
F 6 HOH A 91 691 45 HOH HOH . 
F 6 HOH A 92 692 68 HOH HOH . 
F 6 HOH A 93 693 83 HOH HOH . 
F 6 HOH A 94 694 46 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . D 4 22.939 5.224 21.482 1 29.29 ? C1 EDO 502 A 1 
HETATM 2 O O1 EDO . . . D 4 23.883 6.184 21.91 1 27.78 ? O1 EDO 502 A 1 
HETATM 3 C C2 EDO . . . D 4 23.205 4.755 20.094 1 29.17 ? C2 EDO 502 A 1 
HETATM 4 O O2 EDO . . . D 4 22.442 3.615 19.674 1 28.13 ? O2 EDO 502 A 1 
#
_model_server_stats.io_time_ms              57 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           319 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           4 
#