data_7C6U # _model_server_result.job_id rK6fg2HuRXpTioZfOrfdqw _model_server_result.datetime_utc '2024-11-21 11:20:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7c6u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 7C6U # _exptl.entry_id 7C6U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 485.551 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(1S,2S)-2-({N-[(benzyloxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 114.711 _cell.angle_gamma 90 _cell.entry_id 7C6U _cell.length_a 100.003 _cell.length_b 79.607 _cell.length_c 51.851 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7C6U _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 -21.675869 0 47.102897 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 145 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 145 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C21 _struct_conn.ptnr2_label_comp_id K36 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id K36 _struct_conn.ptnr2_auth_seq_id 401 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.766 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C21 H31 N3 O8 S' _chem_comp.formula_weight 485.551 _chem_comp.id K36 _chem_comp.mon_nstd_flag . _chem_comp.name '(1S,2S)-2-({N-[(benzyloxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid' _chem_comp.type peptide-like _chem_comp.pdbx_synonyms GC376 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O22 C21 K36 sing 173 n n C21 C20 K36 sing 174 n n C20 C24 K36 sing 175 n n C20 N19 K36 sing 176 n n C24 C25 K36 sing 177 n n C26 C27 K36 sing 178 n n C26 C25 K36 sing 179 n n C27 N28 K36 sing 180 n n O18 C17 K36 doub 181 n n N19 C17 K36 sing 182 n n C25 C29 K36 sing 183 n n C29 N28 K36 sing 184 n n C29 O30 K36 doub 185 n n C17 C12 K36 sing 186 n n C13 C12 K36 sing 187 n n C13 C14 K36 sing 188 n n C12 N11 K36 sing 189 n n C15 C14 K36 sing 190 n n C14 C16 K36 sing 191 n n N11 C9 K36 sing 192 n n O10 C9 K36 doub 193 n n C9 O8 K36 sing 194 n n O8 C7 K36 sing 195 n n C7 H1 K36 sing 196 n n C7 H2 K36 sing 197 n n N11 H4 K36 sing 198 n n C12 H5 K36 sing 199 n n C13 H6 K36 sing 200 n n C13 H7 K36 sing 201 n n C14 H8 K36 sing 202 n n C15 H9 K36 sing 203 n n C15 H10 K36 sing 204 n n C15 H11 K36 sing 205 n n C16 H12 K36 sing 206 n n C16 H13 K36 sing 207 n n C16 H14 K36 sing 208 n n N19 H15 K36 sing 209 n n C20 H16 K36 sing 210 n n C21 H17 K36 sing 211 n n O22 H19 K36 sing 212 n n C24 H20 K36 sing 213 n n C24 H21 K36 sing 214 n n C25 H22 K36 sing 215 n n C26 H23 K36 sing 216 n n C26 H24 K36 sing 217 n n C27 H25 K36 sing 218 n n C27 H26 K36 sing 219 n n N28 H27 K36 sing 220 n n C7 C1 K36 sing 221 n n C1 C2 K36 sing 222 n y C2 C3 K36 doub 223 n y C3 C4 K36 sing 224 n y C4 C5 K36 doub 225 n y C5 C6 K36 sing 226 n y C6 C1 K36 doub 227 n y C21 S1 K36 sing 228 n n S1 O1 K36 doub 229 n n S1 O2 K36 doub 230 n n S1 O3 K36 sing 231 n n C2 H3 K36 sing 232 n n C3 H18 K36 sing 233 n n C4 H28 K36 sing 234 n n C5 H29 K36 sing 235 n n C6 H30 K36 sing 236 n n O3 H31 K36 sing 237 n n # _atom_sites.entry_id 7C6U _atom_sites.fract_transf_matrix[1][1] 0.01 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004602 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012562 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02123 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 K36 A 1 401 401 K36 LIG . C 3 HOH A 1 501 59 HOH HOH . C 3 HOH A 2 502 124 HOH HOH . C 3 HOH A 3 503 100 HOH HOH . C 3 HOH A 4 504 55 HOH HOH . C 3 HOH A 5 505 136 HOH HOH . C 3 HOH A 6 506 150 HOH HOH . C 3 HOH A 7 507 102 HOH HOH . C 3 HOH A 8 508 127 HOH HOH . C 3 HOH A 9 509 26 HOH HOH . C 3 HOH A 10 510 70 HOH HOH . C 3 HOH A 11 511 134 HOH HOH . C 3 HOH A 12 512 23 HOH HOH . C 3 HOH A 13 513 49 HOH HOH . C 3 HOH A 14 514 39 HOH HOH . C 3 HOH A 15 515 85 HOH HOH . C 3 HOH A 16 516 130 HOH HOH . C 3 HOH A 17 517 115 HOH HOH . C 3 HOH A 18 518 16 HOH HOH . C 3 HOH A 19 519 180 HOH HOH . C 3 HOH A 20 520 122 HOH HOH . C 3 HOH A 21 521 175 HOH HOH . C 3 HOH A 22 522 12 HOH HOH . C 3 HOH A 23 523 65 HOH HOH . C 3 HOH A 24 524 92 HOH HOH . C 3 HOH A 25 525 167 HOH HOH . C 3 HOH A 26 526 29 HOH HOH . C 3 HOH A 27 527 24 HOH HOH . C 3 HOH A 28 528 41 HOH HOH . C 3 HOH A 29 529 99 HOH HOH . C 3 HOH A 30 530 108 HOH HOH . C 3 HOH A 31 531 148 HOH HOH . C 3 HOH A 32 532 42 HOH HOH . C 3 HOH A 33 533 129 HOH HOH . C 3 HOH A 34 534 96 HOH HOH . C 3 HOH A 35 535 22 HOH HOH . C 3 HOH A 36 536 126 HOH HOH . C 3 HOH A 37 537 152 HOH HOH . C 3 HOH A 38 538 46 HOH HOH . C 3 HOH A 39 539 5 HOH HOH . C 3 HOH A 40 540 66 HOH HOH . C 3 HOH A 41 541 164 HOH HOH . C 3 HOH A 42 542 107 HOH HOH . C 3 HOH A 43 543 101 HOH HOH . C 3 HOH A 44 544 71 HOH HOH . C 3 HOH A 45 545 2 HOH HOH . C 3 HOH A 46 546 54 HOH HOH . C 3 HOH A 47 547 17 HOH HOH . C 3 HOH A 48 548 144 HOH HOH . C 3 HOH A 49 549 69 HOH HOH . C 3 HOH A 50 550 53 HOH HOH . C 3 HOH A 51 551 27 HOH HOH . C 3 HOH A 52 552 13 HOH HOH . C 3 HOH A 53 553 109 HOH HOH . C 3 HOH A 54 554 14 HOH HOH . C 3 HOH A 55 555 32 HOH HOH . C 3 HOH A 56 556 10 HOH HOH . C 3 HOH A 57 557 163 HOH HOH . C 3 HOH A 58 558 171 HOH HOH . C 3 HOH A 59 559 3 HOH HOH . C 3 HOH A 60 560 31 HOH HOH . C 3 HOH A 61 561 131 HOH HOH . C 3 HOH A 62 562 84 HOH HOH . C 3 HOH A 63 563 44 HOH HOH . C 3 HOH A 64 564 139 HOH HOH . C 3 HOH A 65 565 78 HOH HOH . C 3 HOH A 66 566 77 HOH HOH . C 3 HOH A 67 567 125 HOH HOH . C 3 HOH A 68 568 112 HOH HOH . C 3 HOH A 69 569 36 HOH HOH . C 3 HOH A 70 570 141 HOH HOH . C 3 HOH A 71 571 58 HOH HOH . C 3 HOH A 72 572 97 HOH HOH . C 3 HOH A 73 573 123 HOH HOH . C 3 HOH A 74 574 60 HOH HOH . C 3 HOH A 75 575 56 HOH HOH . C 3 HOH A 76 576 57 HOH HOH . C 3 HOH A 77 577 79 HOH HOH . C 3 HOH A 78 578 30 HOH HOH . C 3 HOH A 79 579 34 HOH HOH . C 3 HOH A 80 580 64 HOH HOH . C 3 HOH A 81 581 45 HOH HOH . C 3 HOH A 82 582 140 HOH HOH . C 3 HOH A 83 583 7 HOH HOH . C 3 HOH A 84 584 67 HOH HOH . C 3 HOH A 85 585 47 HOH HOH . C 3 HOH A 86 586 88 HOH HOH . C 3 HOH A 87 587 76 HOH HOH . C 3 HOH A 88 588 82 HOH HOH . C 3 HOH A 89 589 15 HOH HOH . C 3 HOH A 90 590 80 HOH HOH . C 3 HOH A 91 591 21 HOH HOH . C 3 HOH A 92 592 94 HOH HOH . C 3 HOH A 93 593 145 HOH HOH . C 3 HOH A 94 594 11 HOH HOH . C 3 HOH A 95 595 6 HOH HOH . C 3 HOH A 96 596 135 HOH HOH . C 3 HOH A 97 597 19 HOH HOH . C 3 HOH A 98 598 87 HOH HOH . C 3 HOH A 99 599 83 HOH HOH . C 3 HOH A 100 600 116 HOH HOH . C 3 HOH A 101 601 20 HOH HOH . C 3 HOH A 102 602 51 HOH HOH . C 3 HOH A 103 603 120 HOH HOH . C 3 HOH A 104 604 105 HOH HOH . C 3 HOH A 105 605 114 HOH HOH . C 3 HOH A 106 606 119 HOH HOH . C 3 HOH A 107 607 48 HOH HOH . C 3 HOH A 108 608 9 HOH HOH . C 3 HOH A 109 609 137 HOH HOH . C 3 HOH A 110 610 38 HOH HOH . C 3 HOH A 111 611 33 HOH HOH . C 3 HOH A 112 612 63 HOH HOH . C 3 HOH A 113 613 28 HOH HOH . C 3 HOH A 114 614 93 HOH HOH . C 3 HOH A 115 615 18 HOH HOH . C 3 HOH A 116 616 161 HOH HOH . C 3 HOH A 117 617 37 HOH HOH . C 3 HOH A 118 618 50 HOH HOH . C 3 HOH A 119 619 8 HOH HOH . C 3 HOH A 120 620 113 HOH HOH . C 3 HOH A 121 621 4 HOH HOH . C 3 HOH A 122 622 110 HOH HOH . C 3 HOH A 123 623 52 HOH HOH . C 3 HOH A 124 624 81 HOH HOH . C 3 HOH A 125 625 89 HOH HOH . C 3 HOH A 126 626 61 HOH HOH . C 3 HOH A 127 627 147 HOH HOH . C 3 HOH A 128 628 155 HOH HOH . C 3 HOH A 129 629 176 HOH HOH . C 3 HOH A 130 630 132 HOH HOH . C 3 HOH A 131 631 62 HOH HOH . C 3 HOH A 132 632 169 HOH HOH . C 3 HOH A 133 633 91 HOH HOH . C 3 HOH A 134 634 149 HOH HOH . C 3 HOH A 135 635 128 HOH HOH . C 3 HOH A 136 636 153 HOH HOH . C 3 HOH A 137 637 95 HOH HOH . C 3 HOH A 138 638 160 HOH HOH . C 3 HOH A 139 639 143 HOH HOH . C 3 HOH A 140 640 170 HOH HOH . C 3 HOH A 141 641 111 HOH HOH . C 3 HOH A 142 642 73 HOH HOH . C 3 HOH A 143 643 133 HOH HOH . C 3 HOH A 144 644 179 HOH HOH . C 3 HOH A 145 645 104 HOH HOH . C 3 HOH A 146 646 75 HOH HOH . C 3 HOH A 147 647 172 HOH HOH . C 3 HOH A 148 648 74 HOH HOH . C 3 HOH A 149 649 138 HOH HOH . C 3 HOH A 150 650 1 HOH HOH . C 3 HOH A 151 651 90 HOH HOH . C 3 HOH A 152 652 117 HOH HOH . C 3 HOH A 153 653 173 HOH HOH . C 3 HOH A 154 654 86 HOH HOH . C 3 HOH A 155 655 106 HOH HOH . C 3 HOH A 156 656 165 HOH HOH . C 3 HOH A 157 657 174 HOH HOH . C 3 HOH A 158 658 142 HOH HOH . C 3 HOH A 159 659 177 HOH HOH . C 3 HOH A 160 660 166 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C7 K36 . . . B 2 -21.46 -30.163 1.311 1 34.94 ? C7 K36 401 A 1 HETATM 2 O O8 K36 . . . B 2 -21.44 -28.879 0.635 1 27.16 ? O8 K36 401 A 1 HETATM 3 C C9 K36 . . . B 2 -20.761 -27.892 1.238 1 26.44 ? C9 K36 401 A 1 HETATM 4 O O10 K36 . . . B 2 -20.187 -28.004 2.297 1 27.2 ? O10 K36 401 A 1 HETATM 5 C C1 K36 . . . B 2 -22.375 -30.146 2.503 1 47.56 ? C1 K36 401 A 1 HETATM 6 C C2 K36 . . . B 2 -23.38 -29.202 2.615 1 39.75 ? C2 K36 401 A 1 HETATM 7 C C3 K36 . . . B 2 -24.222 -29.194 3.716 1 46.3 ? C3 K36 401 A 1 HETATM 8 C C4 K36 . . . B 2 -24.069 -30.131 4.709 1 48.81 ? C4 K36 401 A 1 HETATM 9 C C5 K36 . . . B 2 -23.075 -31.077 4.609 1 39.7 ? C5 K36 401 A 1 HETATM 10 C C6 K36 . . . B 2 -22.23 -31.084 3.51 1 38.01 ? C6 K36 401 A 1 HETATM 11 N N11 K36 . . . B 2 -20.8 -26.773 0.494 1 18.02 ? N11 K36 401 A 1 HETATM 12 C C12 K36 . . . B 2 -20.207 -25.537 0.975 1 23.78 ? C12 K36 401 A 1 HETATM 13 C C17 K36 . . . B 2 -20.87 -25.039 2.26 1 29.31 ? C17 K36 401 A 1 HETATM 14 O O18 K36 . . . B 2 -22.089 -25.122 2.402 1 30.4 ? O18 K36 401 A 1 HETATM 15 C C13 K36 . . . B 2 -20.27 -24.459 -0.105 1 25.23 ? C13 K36 401 A 1 HETATM 16 C C14 K36 . . . B 2 -19.564 -24.803 -1.416 1 32.31 ? C14 K36 401 A 1 HETATM 17 C C15 K36 . . . B 2 -19.766 -23.702 -2.445 1 31.48 ? C15 K36 401 A 1 HETATM 18 C C16 K36 . . . B 2 -18.082 -25.051 -1.185 1 24.1 ? C16 K36 401 A 1 HETATM 19 N N19 K36 . . . B 2 -20.058 -24.53 3.192 1 19.07 ? N19 K36 401 A 1 HETATM 20 C C20 K36 . . . B 2 -20.539 -23.983 4.462 1 19.44 ? C20 K36 401 A 1 HETATM 21 C C21 K36 . . . B 2 -20.159 -22.515 4.555 1 19.89 ? C21 K36 401 A 1 HETATM 22 O O22 K36 . . . B 2 -20.649 -21.913 5.731 1 27.89 ? O22 K36 401 A 1 HETATM 23 C C24 K36 . . . B 2 -19.966 -24.786 5.634 1 19.49 ? C24 K36 401 A 1 HETATM 24 C C25 K36 . . . B 2 -20.495 -26.219 5.638 1 16.78 ? C25 K36 401 A 1 HETATM 25 C C26 K36 . . . B 2 -21.973 -26.399 5.947 1 25.89 ? C26 K36 401 A 1 HETATM 26 C C27 K36 . . . B 2 -22.054 -27.842 6.419 1 32.08 ? C27 K36 401 A 1 HETATM 27 N N28 K36 . . . B 2 -20.744 -28.043 7.029 1 21.05 ? N28 K36 401 A 1 HETATM 28 C C29 K36 . . . B 2 -19.843 -27.142 6.651 1 19.64 ? C29 K36 401 A 1 HETATM 29 O O30 K36 . . . B 2 -18.666 -27.082 7.042 1 16.87 ? O30 K36 401 A 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 29 #