data_7C82 # _model_server_result.job_id P6pLCXxE3epu0kIqygy9DA _model_server_result.datetime_utc '2024-10-20 00:40:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7c82 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 7C82 # _exptl.entry_id 7C82 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 112.411 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CADMIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7C82 _cell.length_a 79.783 _cell.length_b 79.783 _cell.length_c 61.01 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7C82 _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 42 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A N SER 1 A SER 0 1_555 C CD CD . A CD 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? metalc ? metalc2 A OG SER 1 A SER 0 1_555 C CD CD . A CD 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? metalc ? metalc3 A ND1 HIS 38 A HIS 37 1_555 E CD CD . A CD 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.407 ? metalc ? metalc4 A OE1 GLU 92 A GLU 91 1_555 C CD CD . A CD 202 6_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.549 ? metalc ? metalc5 A OE2 GLU 92 A GLU 91 1_555 C CD CD . A CD 202 6_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc6 A ND1 HIS 164 A HIS 163 1_555 D CD CD . A CD 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? metalc ? metalc7 A NE2 HIS 166 A HIS 165 1_555 D CD CD . A CD 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? metalc ? metalc8 A OE1 GLU 174 A GLU 173 1_555 C CD CD . A CD 202 7_565 ? A ? ? ? ? ? ? ? ? ? ? 2.347 ? metalc ? metalc9 A OE1 GLU 174 A GLU 173 1_555 C CD CD . A CD 202 7_565 ? B ? ? ? ? ? ? ? ? ? ? 2.549 ? metalc ? metalc10 A OE2 GLU 174 A GLU 173 1_555 C CD CD . A CD 202 7_565 ? A ? ? ? ? ? ? ? ? ? ? 2.277 ? metalc ? metalc11 A OE2 GLU 174 A GLU 173 1_555 C CD CD . A CD 202 7_565 ? B ? ? ? ? ? ? ? ? ? ? 2.238 ? metalc ? metalc12 A OD1 ASN 181 A ASN 180 1_555 E CD CD . A CD 204 7_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.585 ? metalc ? metalc13 C CD CD . A CD 202 1_555 J O HOH . A HOH 328 7_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc14 D CD CD . A CD 203 1_555 F OXT ACT . A ACT 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? metalc ? metalc15 D CD CD . A CD 203 1_555 G O ACT . A ACT 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.493 ? metalc ? metalc16 D CD CD . A CD 203 1_555 G OXT ACT . A ACT 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? metalc ? metalc17 D CD CD . A CD 203 1_555 J O HOH . A HOH 377 2_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.471 ? metalc ? metalc18 E CD CD . A CD 204 1_555 I OXT ACT . A ACT 208 7_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.505 ? # _chem_comp.formula 'Cd 2' _chem_comp.formula_weight 112.411 _chem_comp.id CD _chem_comp.mon_nstd_flag . _chem_comp.name 'CADMIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7C82 _atom_sites.fract_transf_matrix[1][1] 0.012534 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012534 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016391 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ALA A 1 201 189 ALA ALA . C 3 CD A 1 202 201 CD CD . D 3 CD A 1 203 202 CD CD . E 3 CD A 1 204 203 CD CD . F 4 ACT A 1 205 204 ACT ACT . G 4 ACT A 1 206 205 ACT ACT . H 4 ACT A 1 207 206 ACT ACT . I 4 ACT A 1 208 207 ACT ACT . J 5 HOH A 1 301 8 HOH HOH . J 5 HOH A 2 302 303 HOH HOH . J 5 HOH A 3 303 301 HOH HOH . J 5 HOH A 4 304 13 HOH HOH . J 5 HOH A 5 305 304 HOH HOH . J 5 HOH A 6 306 306 HOH HOH . J 5 HOH A 7 307 312 HOH HOH . J 5 HOH A 8 308 337 HOH HOH . J 5 HOH A 9 309 305 HOH HOH . J 5 HOH A 10 310 19 HOH HOH . J 5 HOH A 11 311 318 HOH HOH . J 5 HOH A 12 312 308 HOH HOH . J 5 HOH A 13 313 307 HOH HOH . J 5 HOH A 14 314 314 HOH HOH . J 5 HOH A 15 315 9 HOH HOH . J 5 HOH A 16 316 302 HOH HOH . J 5 HOH A 17 317 313 HOH HOH . J 5 HOH A 18 318 315 HOH HOH . J 5 HOH A 19 319 317 HOH HOH . J 5 HOH A 20 320 6 HOH HOH . J 5 HOH A 21 321 316 HOH HOH . J 5 HOH A 22 322 320 HOH HOH . J 5 HOH A 23 323 324 HOH HOH . J 5 HOH A 24 324 309 HOH HOH . J 5 HOH A 25 325 330 HOH HOH . J 5 HOH A 26 326 331 HOH HOH . J 5 HOH A 27 327 319 HOH HOH . J 5 HOH A 28 328 321 HOH HOH . J 5 HOH A 29 329 344 HOH HOH . J 5 HOH A 30 330 322 HOH HOH . J 5 HOH A 31 331 335 HOH HOH . J 5 HOH A 32 332 353 HOH HOH . J 5 HOH A 33 333 14 HOH HOH . J 5 HOH A 34 334 350 HOH HOH . J 5 HOH A 35 335 328 HOH HOH . J 5 HOH A 36 336 339 HOH HOH . J 5 HOH A 37 337 340 HOH HOH . J 5 HOH A 38 338 343 HOH HOH . J 5 HOH A 39 339 336 HOH HOH . J 5 HOH A 40 340 332 HOH HOH . J 5 HOH A 41 341 345 HOH HOH . J 5 HOH A 42 342 361 HOH HOH . J 5 HOH A 43 343 329 HOH HOH . J 5 HOH A 44 344 342 HOH HOH . J 5 HOH A 45 345 333 HOH HOH . J 5 HOH A 46 346 408 HOH HOH . J 5 HOH A 47 347 351 HOH HOH . J 5 HOH A 48 348 347 HOH HOH . J 5 HOH A 49 349 334 HOH HOH . J 5 HOH A 50 350 407 HOH HOH . J 5 HOH A 51 351 349 HOH HOH . J 5 HOH A 52 352 355 HOH HOH . J 5 HOH A 53 353 368 HOH HOH . J 5 HOH A 54 354 367 HOH HOH . J 5 HOH A 55 355 325 HOH HOH . J 5 HOH A 56 356 357 HOH HOH . J 5 HOH A 57 357 363 HOH HOH . J 5 HOH A 58 358 359 HOH HOH . J 5 HOH A 59 359 370 HOH HOH . J 5 HOH A 60 360 327 HOH HOH . J 5 HOH A 61 361 369 HOH HOH . J 5 HOH A 62 362 388 HOH HOH . J 5 HOH A 63 363 358 HOH HOH . J 5 HOH A 64 364 362 HOH HOH . J 5 HOH A 65 365 323 HOH HOH . J 5 HOH A 66 366 360 HOH HOH . J 5 HOH A 67 367 346 HOH HOH . J 5 HOH A 68 368 352 HOH HOH . J 5 HOH A 69 369 409 HOH HOH . J 5 HOH A 70 370 364 HOH HOH . J 5 HOH A 71 371 398 HOH HOH . J 5 HOH A 72 372 354 HOH HOH . J 5 HOH A 73 373 374 HOH HOH . J 5 HOH A 74 374 404 HOH HOH . J 5 HOH A 75 375 338 HOH HOH . J 5 HOH A 76 376 385 HOH HOH . J 5 HOH A 77 377 311 HOH HOH . J 5 HOH A 78 378 341 HOH HOH . J 5 HOH A 79 379 378 HOH HOH . J 5 HOH A 80 380 375 HOH HOH . J 5 HOH A 81 381 383 HOH HOH . J 5 HOH A 82 382 376 HOH HOH . J 5 HOH A 83 383 386 HOH HOH . J 5 HOH A 84 384 372 HOH HOH . J 5 HOH A 85 385 366 HOH HOH . J 5 HOH A 86 386 381 HOH HOH . J 5 HOH A 87 387 371 HOH HOH . J 5 HOH A 88 388 348 HOH HOH . J 5 HOH A 89 389 326 HOH HOH . J 5 HOH A 90 390 394 HOH HOH . J 5 HOH A 91 391 418 HOH HOH . J 5 HOH A 92 392 390 HOH HOH . J 5 HOH A 93 393 384 HOH HOH . J 5 HOH A 94 394 379 HOH HOH . J 5 HOH A 95 395 401 HOH HOH . J 5 HOH A 96 396 389 HOH HOH . J 5 HOH A 97 397 395 HOH HOH . J 5 HOH A 98 398 387 HOH HOH . J 5 HOH A 99 399 411 HOH HOH . J 5 HOH A 100 400 392 HOH HOH . J 5 HOH A 101 401 373 HOH HOH . J 5 HOH A 102 402 393 HOH HOH . J 5 HOH A 103 403 415 HOH HOH . J 5 HOH A 104 404 356 HOH HOH . J 5 HOH A 105 405 397 HOH HOH . J 5 HOH A 106 406 430 HOH HOH . J 5 HOH A 107 407 391 HOH HOH . J 5 HOH A 108 408 380 HOH HOH . J 5 HOH A 109 409 365 HOH HOH . J 5 HOH A 110 410 382 HOH HOH . J 5 HOH A 111 411 422 HOH HOH . J 5 HOH A 112 412 396 HOH HOH . J 5 HOH A 113 413 444 HOH HOH . J 5 HOH A 114 414 399 HOH HOH . J 5 HOH A 115 415 431 HOH HOH . J 5 HOH A 116 416 414 HOH HOH . J 5 HOH A 117 417 403 HOH HOH . J 5 HOH A 118 418 419 HOH HOH . J 5 HOH A 119 419 438 HOH HOH . J 5 HOH A 120 420 440 HOH HOH . J 5 HOH A 121 421 429 HOH HOH . J 5 HOH A 122 422 412 HOH HOH . J 5 HOH A 123 423 417 HOH HOH . J 5 HOH A 124 424 425 HOH HOH . J 5 HOH A 125 425 433 HOH HOH . J 5 HOH A 126 426 410 HOH HOH . J 5 HOH A 127 427 428 HOH HOH . J 5 HOH A 128 428 413 HOH HOH . J 5 HOH A 129 429 416 HOH HOH . J 5 HOH A 130 430 439 HOH HOH . J 5 HOH A 131 431 435 HOH HOH . J 5 HOH A 132 432 406 HOH HOH . J 5 HOH A 133 433 423 HOH HOH . J 5 HOH A 134 434 426 HOH HOH . J 5 HOH A 135 435 424 HOH HOH . J 5 HOH A 136 436 434 HOH HOH . J 5 HOH A 137 437 405 HOH HOH . J 5 HOH A 138 438 437 HOH HOH . J 5 HOH A 139 439 420 HOH HOH . J 5 HOH A 140 440 402 HOH HOH . J 5 HOH A 141 441 432 HOH HOH . J 5 HOH A 142 442 421 HOH HOH . J 5 HOH A 143 443 459 HOH HOH . J 5 HOH A 144 444 450 HOH HOH . J 5 HOH A 145 445 427 HOH HOH . J 5 HOH A 146 446 442 HOH HOH . J 5 HOH A 147 447 443 HOH HOH . J 5 HOH A 148 448 441 HOH HOH . J 5 HOH A 149 449 445 HOH HOH . J 5 HOH A 150 450 400 HOH HOH . J 5 HOH A 151 451 451 HOH HOH . J 5 HOH A 152 452 436 HOH HOH . J 5 HOH A 153 453 448 HOH HOH . J 5 HOH A 154 454 447 HOH HOH . J 5 HOH A 155 455 454 HOH HOH . J 5 HOH A 156 456 452 HOH HOH . J 5 HOH A 157 457 453 HOH HOH . J 5 HOH A 158 458 446 HOH HOH . J 5 HOH A 159 459 458 HOH HOH . J 5 HOH A 160 460 456 HOH HOH . J 5 HOH A 161 461 449 HOH HOH . J 5 HOH A 162 462 460 HOH HOH . J 5 HOH A 163 463 461 HOH HOH . J 5 HOH A 164 464 464 HOH HOH . J 5 HOH A 165 465 455 HOH HOH . J 5 HOH A 166 466 463 HOH HOH . J 5 HOH A 167 467 465 HOH HOH . J 5 HOH A 168 468 462 HOH HOH . J 5 HOH A 169 469 473 HOH HOH . J 5 HOH A 170 470 471 HOH HOH . J 5 HOH A 171 471 469 HOH HOH . J 5 HOH A 172 472 472 HOH HOH . J 5 HOH A 173 473 468 HOH HOH . J 5 HOH A 174 474 470 HOH HOH . J 5 HOH A 175 475 476 HOH HOH . J 5 HOH A 176 476 466 HOH HOH . J 5 HOH A 177 477 474 HOH HOH . J 5 HOH A 178 478 467 HOH HOH . J 5 HOH A 179 479 475 HOH HOH . J 5 HOH A 180 480 477 HOH HOH . J 5 HOH A 181 481 482 HOH HOH . J 5 HOH A 182 482 479 HOH HOH . J 5 HOH A 183 483 481 HOH HOH . J 5 HOH A 184 484 480 HOH HOH . J 5 HOH A 185 485 478 HOH HOH . J 5 HOH A 186 486 483 HOH HOH . J 5 HOH A 187 487 486 HOH HOH . J 5 HOH A 188 488 484 HOH HOH . J 5 HOH A 189 489 487 HOH HOH . J 5 HOH A 190 490 485 HOH HOH . J 5 HOH A 191 491 488 HOH HOH . J 5 HOH A 192 492 489 HOH HOH . J 5 HOH A 193 493 492 HOH HOH . J 5 HOH A 194 494 494 HOH HOH . J 5 HOH A 195 495 491 HOH HOH . J 5 HOH A 196 496 493 HOH HOH . J 5 HOH A 197 497 490 HOH HOH . J 5 HOH A 198 498 495 HOH HOH . J 5 HOH A 199 499 11 HOH HOH . J 5 HOH A 200 500 497 HOH HOH . J 5 HOH A 201 501 499 HOH HOH . J 5 HOH A 202 502 5 HOH HOH . J 5 HOH A 203 503 498 HOH HOH . J 5 HOH A 204 504 496 HOH HOH . J 5 HOH A 205 505 500 HOH HOH . J 5 HOH A 206 506 501 HOH HOH . J 5 HOH A 207 507 504 HOH HOH . J 5 HOH A 208 508 506 HOH HOH . J 5 HOH A 209 509 503 HOH HOH . J 5 HOH A 210 510 505 HOH HOH . J 5 HOH A 211 511 507 HOH HOH . J 5 HOH A 212 512 502 HOH HOH . J 5 HOH A 213 513 508 HOH HOH . J 5 HOH A 214 514 17 HOH HOH . J 5 HOH A 215 515 510 HOH HOH . J 5 HOH A 216 516 509 HOH HOH . J 5 HOH A 217 517 511 HOH HOH . J 5 HOH A 218 518 513 HOH HOH . J 5 HOH A 219 519 514 HOH HOH . J 5 HOH A 220 520 512 HOH HOH . J 5 HOH A 221 521 515 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CD _atom_site.label_atom_id CD _atom_site.label_comp_id CD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -24.201 _atom_site.Cartn_y 8.236 _atom_site.Cartn_z 6.694 _atom_site.occupancy 0.85 _atom_site.B_iso_or_equiv 12.33 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CD _atom_site.auth_comp_id CD _atom_site.auth_seq_id 202 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 31 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 251 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #