data_7C8L # _model_server_result.job_id E3jEOpuM7BZAejx-tunPEQ _model_server_result.datetime_utc '2024-11-26 23:18:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7c8l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":304}' # _entry.id 7C8L # _exptl.entry_id 7C8L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7C8L _cell.length_a 92.474 _cell.length_b 92.474 _cell.length_c 80.256 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7C8L _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id OG _struct_conn.ptnr1_label_comp_id SER _struct_conn.ptnr1_label_seq_id 100 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id SER _struct_conn.ptnr1_auth_seq_id 95 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id F _struct_conn.ptnr2_label_atom_id CAB _struct_conn.ptnr2_label_comp_id FP6 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id FP6 _struct_conn.ptnr2_auth_seq_id 305 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.373 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 245 n n C1 C2 GOL sing 246 n n C1 H11 GOL sing 247 n n C1 H12 GOL sing 248 n n O1 HO1 GOL sing 249 n n C2 O2 GOL sing 250 n n C2 C3 GOL sing 251 n n C2 H2 GOL sing 252 n n O2 HO2 GOL sing 253 n n C3 O3 GOL sing 254 n n C3 H31 GOL sing 255 n n C3 H32 GOL sing 256 n n O3 HO3 GOL sing 257 n n # _atom_sites.entry_id 7C8L _atom_sites.fract_transf_matrix[1][1] 0.010814 _atom_sites.fract_transf_matrix[1][2] 0.006243 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012487 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01246 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EGC A 1 301 1374 EGC EGC . C 3 SO4 A 1 302 1 SO4 SO4 . D 3 SO4 A 1 303 2 SO4 SO4 . E 4 GOL A 1 304 1 GOL GOL . F 5 FP6 A 1 305 1 FP6 LIG . G 6 HOH A 1 401 117 HOH HOH . G 6 HOH A 2 402 211 HOH HOH . G 6 HOH A 3 403 107 HOH HOH . G 6 HOH A 4 404 268 HOH HOH . G 6 HOH A 5 405 191 HOH HOH . G 6 HOH A 6 406 178 HOH HOH . G 6 HOH A 7 407 214 HOH HOH . G 6 HOH A 8 408 19 HOH HOH . G 6 HOH A 9 409 228 HOH HOH . G 6 HOH A 10 410 197 HOH HOH . G 6 HOH A 11 411 53 HOH HOH . G 6 HOH A 12 412 164 HOH HOH . G 6 HOH A 13 413 273 HOH HOH . G 6 HOH A 14 414 151 HOH HOH . G 6 HOH A 15 415 168 HOH HOH . G 6 HOH A 16 416 80 HOH HOH . G 6 HOH A 17 417 143 HOH HOH . G 6 HOH A 18 418 251 HOH HOH . G 6 HOH A 19 419 35 HOH HOH . G 6 HOH A 20 420 186 HOH HOH . G 6 HOH A 21 421 195 HOH HOH . G 6 HOH A 22 422 14 HOH HOH . G 6 HOH A 23 423 24 HOH HOH . G 6 HOH A 24 424 25 HOH HOH . G 6 HOH A 25 425 82 HOH HOH . G 6 HOH A 26 426 42 HOH HOH . G 6 HOH A 27 427 198 HOH HOH . G 6 HOH A 28 428 226 HOH HOH . G 6 HOH A 29 429 163 HOH HOH . G 6 HOH A 30 430 8 HOH HOH . G 6 HOH A 31 431 50 HOH HOH . G 6 HOH A 32 432 33 HOH HOH . G 6 HOH A 33 433 85 HOH HOH . G 6 HOH A 34 434 31 HOH HOH . G 6 HOH A 35 435 114 HOH HOH . G 6 HOH A 36 436 104 HOH HOH . G 6 HOH A 37 437 66 HOH HOH . G 6 HOH A 38 438 26 HOH HOH . G 6 HOH A 39 439 121 HOH HOH . G 6 HOH A 40 440 253 HOH HOH . G 6 HOH A 41 441 9 HOH HOH . G 6 HOH A 42 442 13 HOH HOH . G 6 HOH A 43 443 166 HOH HOH . G 6 HOH A 44 444 223 HOH HOH . G 6 HOH A 45 445 155 HOH HOH . G 6 HOH A 46 446 234 HOH HOH . G 6 HOH A 47 447 51 HOH HOH . G 6 HOH A 48 448 41 HOH HOH . G 6 HOH A 49 449 90 HOH HOH . G 6 HOH A 50 450 3 HOH HOH . G 6 HOH A 51 451 97 HOH HOH . G 6 HOH A 52 452 39 HOH HOH . G 6 HOH A 53 453 271 HOH HOH . G 6 HOH A 54 454 32 HOH HOH . G 6 HOH A 55 455 83 HOH HOH . G 6 HOH A 56 456 176 HOH HOH . G 6 HOH A 57 457 65 HOH HOH . G 6 HOH A 58 458 88 HOH HOH . G 6 HOH A 59 459 110 HOH HOH . G 6 HOH A 60 460 4 HOH HOH . G 6 HOH A 61 461 56 HOH HOH . G 6 HOH A 62 462 89 HOH HOH . G 6 HOH A 63 463 29 HOH HOH . G 6 HOH A 64 464 122 HOH HOH . G 6 HOH A 65 465 58 HOH HOH . G 6 HOH A 66 466 106 HOH HOH . G 6 HOH A 67 467 69 HOH HOH . G 6 HOH A 68 468 221 HOH HOH . G 6 HOH A 69 469 62 HOH HOH . G 6 HOH A 70 470 10 HOH HOH . G 6 HOH A 71 471 11 HOH HOH . G 6 HOH A 72 472 23 HOH HOH . G 6 HOH A 73 473 119 HOH HOH . G 6 HOH A 74 474 47 HOH HOH . G 6 HOH A 75 475 28 HOH HOH . G 6 HOH A 76 476 75 HOH HOH . G 6 HOH A 77 477 76 HOH HOH . G 6 HOH A 78 478 6 HOH HOH . G 6 HOH A 79 479 16 HOH HOH . G 6 HOH A 80 480 57 HOH HOH . G 6 HOH A 81 481 98 HOH HOH . G 6 HOH A 82 482 2 HOH HOH . G 6 HOH A 83 483 63 HOH HOH . G 6 HOH A 84 484 108 HOH HOH . G 6 HOH A 85 485 103 HOH HOH . G 6 HOH A 86 486 40 HOH HOH . G 6 HOH A 87 487 48 HOH HOH . G 6 HOH A 88 488 52 HOH HOH . G 6 HOH A 89 489 18 HOH HOH . G 6 HOH A 90 490 34 HOH HOH . G 6 HOH A 91 491 79 HOH HOH . G 6 HOH A 92 492 5 HOH HOH . G 6 HOH A 93 493 37 HOH HOH . G 6 HOH A 94 494 124 HOH HOH . G 6 HOH A 95 495 64 HOH HOH . G 6 HOH A 96 496 174 HOH HOH . G 6 HOH A 97 497 46 HOH HOH . G 6 HOH A 98 498 116 HOH HOH . G 6 HOH A 99 499 20 HOH HOH . G 6 HOH A 100 500 81 HOH HOH . G 6 HOH A 101 501 74 HOH HOH . G 6 HOH A 102 502 21 HOH HOH . G 6 HOH A 103 503 84 HOH HOH . G 6 HOH A 104 504 235 HOH HOH . G 6 HOH A 105 505 72 HOH HOH . G 6 HOH A 106 506 95 HOH HOH . G 6 HOH A 107 507 22 HOH HOH . G 6 HOH A 108 508 7 HOH HOH . G 6 HOH A 109 509 157 HOH HOH . G 6 HOH A 110 510 181 HOH HOH . G 6 HOH A 111 511 17 HOH HOH . G 6 HOH A 112 512 43 HOH HOH . G 6 HOH A 113 513 93 HOH HOH . G 6 HOH A 114 514 141 HOH HOH . G 6 HOH A 115 515 156 HOH HOH . G 6 HOH A 116 516 170 HOH HOH . G 6 HOH A 117 517 109 HOH HOH . G 6 HOH A 118 518 272 HOH HOH . G 6 HOH A 119 519 152 HOH HOH . G 6 HOH A 120 520 172 HOH HOH . G 6 HOH A 121 521 91 HOH HOH . G 6 HOH A 122 522 99 HOH HOH . G 6 HOH A 123 523 60 HOH HOH . G 6 HOH A 124 524 68 HOH HOH . G 6 HOH A 125 525 229 HOH HOH . G 6 HOH A 126 526 38 HOH HOH . G 6 HOH A 127 527 146 HOH HOH . G 6 HOH A 128 528 190 HOH HOH . G 6 HOH A 129 529 236 HOH HOH . G 6 HOH A 130 530 205 HOH HOH . G 6 HOH A 131 531 77 HOH HOH . G 6 HOH A 132 532 126 HOH HOH . G 6 HOH A 133 533 162 HOH HOH . G 6 HOH A 134 534 86 HOH HOH . G 6 HOH A 135 535 127 HOH HOH . G 6 HOH A 136 536 217 HOH HOH . G 6 HOH A 137 537 118 HOH HOH . G 6 HOH A 138 538 70 HOH HOH . G 6 HOH A 139 539 27 HOH HOH . G 6 HOH A 140 540 129 HOH HOH . G 6 HOH A 141 541 171 HOH HOH . G 6 HOH A 142 542 145 HOH HOH . G 6 HOH A 143 543 30 HOH HOH . G 6 HOH A 144 544 227 HOH HOH . G 6 HOH A 145 545 196 HOH HOH . G 6 HOH A 146 546 259 HOH HOH . G 6 HOH A 147 547 12 HOH HOH . G 6 HOH A 148 548 1 HOH HOH . G 6 HOH A 149 549 202 HOH HOH . G 6 HOH A 150 550 49 HOH HOH . G 6 HOH A 151 551 59 HOH HOH . G 6 HOH A 152 552 120 HOH HOH . G 6 HOH A 153 553 61 HOH HOH . G 6 HOH A 154 554 105 HOH HOH . G 6 HOH A 155 555 200 HOH HOH . G 6 HOH A 156 556 149 HOH HOH . G 6 HOH A 157 557 67 HOH HOH . G 6 HOH A 158 558 209 HOH HOH . G 6 HOH A 159 559 112 HOH HOH . G 6 HOH A 160 560 161 HOH HOH . G 6 HOH A 161 561 15 HOH HOH . G 6 HOH A 162 562 87 HOH HOH . G 6 HOH A 163 563 187 HOH HOH . G 6 HOH A 164 564 159 HOH HOH . G 6 HOH A 165 565 96 HOH HOH . G 6 HOH A 166 566 94 HOH HOH . G 6 HOH A 167 567 150 HOH HOH . G 6 HOH A 168 568 73 HOH HOH . G 6 HOH A 169 569 45 HOH HOH . G 6 HOH A 170 570 115 HOH HOH . G 6 HOH A 171 571 194 HOH HOH . G 6 HOH A 172 572 239 HOH HOH . G 6 HOH A 173 573 71 HOH HOH . G 6 HOH A 174 574 270 HOH HOH . G 6 HOH A 175 575 136 HOH HOH . G 6 HOH A 176 576 225 HOH HOH . G 6 HOH A 177 577 201 HOH HOH . G 6 HOH A 178 578 100 HOH HOH . G 6 HOH A 179 579 144 HOH HOH . G 6 HOH A 180 580 160 HOH HOH . G 6 HOH A 181 581 224 HOH HOH . G 6 HOH A 182 582 135 HOH HOH . G 6 HOH A 183 583 92 HOH HOH . G 6 HOH A 184 584 219 HOH HOH . G 6 HOH A 185 585 265 HOH HOH . G 6 HOH A 186 586 208 HOH HOH . G 6 HOH A 187 587 125 HOH HOH . G 6 HOH A 188 588 279 HOH HOH . G 6 HOH A 189 589 158 HOH HOH . G 6 HOH A 190 590 44 HOH HOH . G 6 HOH A 191 591 183 HOH HOH . G 6 HOH A 192 592 249 HOH HOH . G 6 HOH A 193 593 238 HOH HOH . G 6 HOH A 194 594 260 HOH HOH . G 6 HOH A 195 595 154 HOH HOH . G 6 HOH A 196 596 275 HOH HOH . G 6 HOH A 197 597 179 HOH HOH . G 6 HOH A 198 598 242 HOH HOH . G 6 HOH A 199 599 167 HOH HOH . G 6 HOH A 200 600 147 HOH HOH . G 6 HOH A 201 601 247 HOH HOH . G 6 HOH A 202 602 264 HOH HOH . G 6 HOH A 203 603 184 HOH HOH . G 6 HOH A 204 604 230 HOH HOH . G 6 HOH A 205 605 245 HOH HOH . G 6 HOH A 206 606 210 HOH HOH . G 6 HOH A 207 607 231 HOH HOH . G 6 HOH A 208 608 213 HOH HOH . G 6 HOH A 209 609 240 HOH HOH . G 6 HOH A 210 610 261 HOH HOH . G 6 HOH A 211 611 263 HOH HOH . G 6 HOH A 212 612 177 HOH HOH . G 6 HOH A 213 613 276 HOH HOH . G 6 HOH A 214 614 111 HOH HOH . G 6 HOH A 215 615 165 HOH HOH . G 6 HOH A 216 616 123 HOH HOH . G 6 HOH A 217 617 78 HOH HOH . G 6 HOH A 218 618 130 HOH HOH . G 6 HOH A 219 619 246 HOH HOH . G 6 HOH A 220 620 133 HOH HOH . G 6 HOH A 221 621 185 HOH HOH . G 6 HOH A 222 622 281 HOH HOH . G 6 HOH A 223 623 203 HOH HOH . G 6 HOH A 224 624 131 HOH HOH . G 6 HOH A 225 625 36 HOH HOH . G 6 HOH A 226 626 278 HOH HOH . G 6 HOH A 227 627 142 HOH HOH . G 6 HOH A 228 628 189 HOH HOH . G 6 HOH A 229 629 193 HOH HOH . G 6 HOH A 230 630 180 HOH HOH . G 6 HOH A 231 631 206 HOH HOH . G 6 HOH A 232 632 244 HOH HOH . G 6 HOH A 233 633 207 HOH HOH . G 6 HOH A 234 634 267 HOH HOH . G 6 HOH A 235 635 113 HOH HOH . G 6 HOH A 236 636 192 HOH HOH . G 6 HOH A 237 637 132 HOH HOH . G 6 HOH A 238 638 277 HOH HOH . G 6 HOH A 239 639 148 HOH HOH . G 6 HOH A 240 640 255 HOH HOH . G 6 HOH A 241 641 237 HOH HOH . G 6 HOH A 242 642 137 HOH HOH . G 6 HOH A 243 643 175 HOH HOH . G 6 HOH A 244 644 222 HOH HOH . G 6 HOH A 245 645 241 HOH HOH . G 6 HOH A 246 646 262 HOH HOH . G 6 HOH A 247 647 266 HOH HOH . G 6 HOH A 248 648 140 HOH HOH . G 6 HOH A 249 649 134 HOH HOH . G 6 HOH A 250 650 243 HOH HOH . G 6 HOH A 251 651 232 HOH HOH . G 6 HOH A 252 652 54 HOH HOH . G 6 HOH A 253 653 216 HOH HOH . G 6 HOH A 254 654 128 HOH HOH . G 6 HOH A 255 655 199 HOH HOH . G 6 HOH A 256 656 274 HOH HOH . G 6 HOH A 257 657 280 HOH HOH . G 6 HOH A 258 658 153 HOH HOH . G 6 HOH A 259 659 55 HOH HOH . G 6 HOH A 260 660 252 HOH HOH . G 6 HOH A 261 661 139 HOH HOH . G 6 HOH A 262 662 173 HOH HOH . G 6 HOH A 263 663 233 HOH HOH . G 6 HOH A 264 664 258 HOH HOH . G 6 HOH A 265 665 218 HOH HOH . G 6 HOH A 266 666 257 HOH HOH . G 6 HOH A 267 667 212 HOH HOH . G 6 HOH A 268 668 220 HOH HOH . G 6 HOH A 269 669 101 HOH HOH . G 6 HOH A 270 670 215 HOH HOH . G 6 HOH A 271 671 138 HOH HOH . G 6 HOH A 272 672 188 HOH HOH . G 6 HOH A 273 673 250 HOH HOH . G 6 HOH A 274 674 182 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 4 -20.744 -25.635 13.732 1 38.35 ? C1 GOL 304 A 1 HETATM 2 O O1 GOL . . . E 4 -20.173 -26.707 13.042 1 36.81 ? O1 GOL 304 A 1 HETATM 3 C C2 GOL . . . E 4 -19.967 -25.486 15.05 1 41.07 ? C2 GOL 304 A 1 HETATM 4 O O2 GOL . . . E 4 -18.711 -24.941 14.857 1 38.93 ? O2 GOL 304 A 1 HETATM 5 C C3 GOL . . . E 4 -20.86 -24.597 15.938 1 45.37 ? C3 GOL 304 A 1 HETATM 6 O O3 GOL . . . E 4 -20.049 -24.12 16.964 1 48.04 ? O3 GOL 304 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #