data_7C9M # _model_server_result.job_id A24jiABPe5vc24pcy-4hrA _model_server_result.datetime_utc '2024-11-24 23:04:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7c9m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":301}' # _entry.id 7C9M # _exptl.entry_id 7C9M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 256.258 _entity.id 2 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description '(2S)-2-azanyl-4-[[(2R)-3-(1H-imidazol-4-yl)-1-oxidanyl-1-oxidanylidene-propan-2-yl]amino]butanoic acid' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7C9M _cell.length_a 60.519 _cell.length_b 96.684 _cell.length_c 211.428 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7C9M _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,M 1 1 B,G,H,N 2 1 C,I,J,O 3 1 D,K,L,P 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 G N N ? 2 I N N ? 2 K N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id C _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 124 _struct_conn.ptnr1_auth_asym_id C _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 116 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id D _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 124 _struct_conn.ptnr2_auth_asym_id D _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 116 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.031 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C10 H16 N4 O4' _chem_comp.formula_weight 256.258 _chem_comp.id FN6 _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-2-azanyl-4-[[(2R)-3-(1H-imidazol-4-yl)-1-oxidanyl-1-oxidanylidene-propan-2-yl]amino]butanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O5 C3 FN6 doub 83 n n O4 C3 FN6 sing 84 n n C3 C2 FN6 sing 85 n n C11 N10 FN6 sing 86 n y C11 C7 FN6 doub 87 n y N10 C9 FN6 sing 88 n y O16 C15 FN6 doub 89 n n C7 C6 FN6 sing 90 n n C7 N8 FN6 sing 91 n y C6 C2 FN6 sing 92 n n C2 N1 FN6 sing 93 n n N1 C12 FN6 sing 94 n n C9 N8 FN6 doub 95 n y C13 C12 FN6 sing 96 n n C13 C14 FN6 sing 97 n n C15 O17 FN6 sing 98 n n C15 C14 FN6 sing 99 n n C14 N18 FN6 sing 100 n n N10 H1 FN6 sing 101 n n C11 H2 FN6 sing 102 n n C13 H3 FN6 sing 103 n n C13 H4 FN6 sing 104 n n C14 H5 FN6 sing 105 n n N1 H6 FN6 sing 106 n n C2 H8 FN6 sing 107 n n O4 H9 FN6 sing 108 n n C6 H10 FN6 sing 109 n n C6 H11 FN6 sing 110 n n C9 H13 FN6 sing 111 n n C12 H14 FN6 sing 112 n n C12 H15 FN6 sing 113 n n O17 H16 FN6 sing 114 n n N18 H17 FN6 sing 115 n n N18 H18 FN6 sing 116 n n # _atom_sites.entry_id 7C9M _atom_sites.fract_transf_matrix[1][1] 0.016524 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010343 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00473 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 FN6 A 1 301 1 FN6 XNA . F 3 MTA A 1 302 1 MTA MTA . G 2 FN6 B 1 301 2 FN6 XNA . H 3 MTA B 1 302 2 MTA MTA . I 2 FN6 C 1 301 3 FN6 XNA . J 3 MTA C 1 302 3 MTA MTA . K 2 FN6 D 1 301 4 FN6 XNA . L 3 MTA D 1 302 4 MTA MTA . M 4 HOH A 1 401 18 HOH HOH . M 4 HOH A 2 402 6 HOH HOH . M 4 HOH A 3 403 9 HOH HOH . M 4 HOH A 4 404 19 HOH HOH . M 4 HOH A 5 405 7 HOH HOH . M 4 HOH A 6 406 8 HOH HOH . M 4 HOH A 7 407 15 HOH HOH . N 4 HOH B 1 401 23 HOH HOH . N 4 HOH B 2 402 3 HOH HOH . N 4 HOH B 3 403 1 HOH HOH . N 4 HOH B 4 404 12 HOH HOH . O 4 HOH C 1 401 22 HOH HOH . O 4 HOH C 2 402 11 HOH HOH . O 4 HOH C 3 403 4 HOH HOH . O 4 HOH C 4 404 5 HOH HOH . O 4 HOH C 5 405 20 HOH HOH . O 4 HOH C 6 406 14 HOH HOH . O 4 HOH C 7 407 21 HOH HOH . O 4 HOH C 8 408 17 HOH HOH . P 4 HOH D 1 401 13 HOH HOH . P 4 HOH D 2 402 16 HOH HOH . P 4 HOH D 3 403 2 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N10 FN6 . . . G 2 50.383 58.832 101.745 1 66.72 ? N10 FN6 301 B 1 HETATM 2 C C11 FN6 . . . G 2 50.648 57.65 101.11 1 66.66 ? C11 FN6 301 B 1 HETATM 3 C C13 FN6 . . . G 2 54.532 51.81 101.376 1 67.38 ? C13 FN6 301 B 1 HETATM 4 C C14 FN6 . . . G 2 53.755 50.625 102.012 1 67 ? C14 FN6 301 B 1 HETATM 5 N N1 FN6 . . . G 2 52.831 53.488 101.912 1 68.81 ? N1 FN6 301 B 1 HETATM 6 C C2 FN6 . . . G 2 52.622 54.934 101.802 1 69.28 ? C2 FN6 301 B 1 HETATM 7 C C3 FN6 . . . G 2 53.146 55.483 100.487 1 70.62 ? C3 FN6 301 B 1 HETATM 8 O O4 FN6 . . . G 2 53.788 56.511 100.403 1 70.12 ? O4 FN6 301 B 1 HETATM 9 O O5 FN6 . . . G 2 52.823 54.724 99.473 1 72.4 ? O5 FN6 301 B 1 HETATM 10 C C6 FN6 . . . G 2 51.132 55.26 101.956 1 67.88 ? C6 FN6 301 B 1 HETATM 11 C C7 FN6 . . . G 2 50.834 56.719 102.083 1 66.87 ? C7 FN6 301 B 1 HETATM 12 N N8 FN6 . . . G 2 50.688 57.321 103.319 1 65.65 ? N8 FN6 301 B 1 HETATM 13 C C9 FN6 . . . G 2 50.416 58.59 103.059 1 66.28 ? C9 FN6 301 B 1 HETATM 14 C C12 FN6 . . . G 2 54.231 53.102 102.117 1 67.74 ? C12 FN6 301 B 1 HETATM 15 C C15 FN6 . . . G 2 53.561 49.497 100.999 1 67.53 ? C15 FN6 301 B 1 HETATM 16 O O16 FN6 . . . G 2 52.982 49.896 99.898 1 68.5 ? O16 FN6 301 B 1 HETATM 17 O O17 FN6 . . . G 2 53.908 48.352 101.214 1 67.8 ? O17 FN6 301 B 1 HETATM 18 N N18 FN6 . . . G 2 54.473 50.168 103.215 1 67.76 ? N18 FN6 301 B 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 18 #