data_7C9V # _model_server_result.job_id eLnc3NsR70hunnApUQvwIQ _model_server_result.datetime_utc '2024-11-29 22:53:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7c9v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":101}' # _entry.id 7C9V # _exptl.entry_id 7C9V _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 228.371 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MYRISTIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? 360-meric 360 'complete icosahedral assembly' 1 ? hexameric 6 'icosahedral asymmetric unit' 2 ? 30-meric 30 'icosahedral pentamer' 3 ? 36-meric 36 'icosahedral 23 hexamer' 4 ? hexameric 6 'icosahedral asymmetric unit, std point frame' 5 ? 360-meric 360 'crystal asymmetric unit, crystal frame' 6 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G 1 (1-60) A,B,C,D,E,F,G 2 1 A,B,C,D,E,F,G 3 (1-5) A,B,C,D,E,F,G 4 (1,2,6,10,23,24) A,B,C,D,E,F,G 5 P A,B,C,D,E,F,G 6 (X0)(1-60) # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] P 'transform to point frame' ? ? 0.309017 -0.809017 0.5 0.809017 0.5 0.309017 -0.5 0.309017 0.809017 0 -383.27989 -146.39989 X0 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'point symmetry operation' ? ? 0.309017 -0.809017 0.5 0.809017 0.5 0.309017 -0.5 0.309017 0.809017 236.88 -146.39989 90.48011 3 'point symmetry operation' ? ? -0.809017 -0.5 0.309017 0.5 -0.309017 0.809017 -0.309017 0.809017 0.5 473.76 0 0 4 'point symmetry operation' ? ? -0.809017 0.5 -0.309017 -0.5 -0.309017 0.809017 0.309017 0.809017 0.5 383.27989 236.88 -146.39989 5 'point symmetry operation' ? ? 0.309017 0.809017 -0.5 -0.809017 0.5 0.309017 0.5 0.309017 0.809017 90.48011 236.88 -146.39989 6 'point symmetry operation' ? ? -0.5 -0.309017 -0.809017 -0.309017 -0.809017 0.5 -0.809017 0.5 0.309017 620.15989 383.27989 236.88 7 'point symmetry operation' ? ? 0 0 -1 -1 0 0 0 1 0 473.76 473.76 0 8 'point symmetry operation' ? ? 0.5 -0.309017 -0.809017 -0.309017 0.809017 -0.5 0.809017 0.5 0.309017 383.27989 236.88 -146.39989 9 'point symmetry operation' ? ? 0.309017 -0.809017 -0.5 0.809017 0.5 -0.309017 0.5 -0.309017 0.809017 473.76 0 0 10 'point symmetry operation' ? ? -0.309017 -0.809017 -0.5 0.809017 -0.5 0.309017 -0.5 -0.309017 0.809017 620.15989 90.48011 236.88 11 'point symmetry operation' ? ? 0.309017 0.809017 0.5 0.809017 -0.5 0.309017 0.5 0.309017 -0.809017 -146.39989 90.48011 236.88 12 'point symmetry operation' ? ? 0.5 0.309017 0.809017 -0.309017 -0.809017 0.5 0.809017 -0.5 -0.309017 -146.39989 383.27989 236.88 13 'point symmetry operation' ? ? 0 0 1 -1 0 0 0 -1 0 0 473.76 473.76 14 'point symmetry operation' ? ? -0.5 0.309017 0.809017 -0.309017 0.809017 -0.5 -0.809017 -0.5 -0.309017 90.48011 236.88 620.15989 15 'point symmetry operation' ? ? -0.309017 0.809017 0.5 0.809017 0.5 -0.309017 -0.5 0.309017 -0.809017 0 0 473.76 16 'point symmetry operation' ? ? -0.809017 -0.5 0.309017 -0.5 0.309017 -0.809017 0.309017 -0.809017 -0.5 473.76 473.76 473.76 17 'point symmetry operation' ? ? -0.809017 0.5 -0.309017 0.5 0.309017 -0.809017 -0.309017 -0.809017 -0.5 383.27989 236.88 620.15989 18 'point symmetry operation' ? ? 0.309017 0.809017 -0.5 0.809017 -0.5 -0.309017 -0.5 -0.309017 -0.809017 90.48011 236.88 620.15989 19 'point symmetry operation' ? ? 1 0 0 0 -1 0 0 0 -1 0 473.76 473.76 20 'point symmetry operation' ? ? 0.309017 -0.809017 0.5 -0.809017 -0.5 -0.309017 0.5 -0.309017 -0.809017 236.88 620.15989 383.27989 21 'point symmetry operation' ? ? -0.309017 -0.809017 0.5 0.809017 -0.5 -0.309017 0.5 0.309017 0.809017 383.27989 236.88 -146.39989 22 'point symmetry operation' ? ? -1 0 0 0 -1 0 0 0 1 473.76 473.76 0 23 'point symmetry operation' ? ? -0.309017 0.809017 -0.5 -0.809017 -0.5 -0.309017 -0.5 0.309017 0.809017 236.88 620.15989 90.48011 24 'point symmetry operation' ? ? 0.809017 0.5 -0.309017 -0.5 0.309017 -0.809017 -0.309017 0.809017 0.5 0 473.76 0 25 'point symmetry operation' ? ? 0.809017 -0.5 0.309017 0.5 0.309017 -0.809017 0.309017 0.809017 0.5 90.48011 236.88 -146.39989 26 'point symmetry operation' ? ? 0 1 0 0 0 -1 -1 0 0 0 473.76 473.76 27 'point symmetry operation' ? ? 0.809017 0.5 0.309017 0.5 -0.309017 -0.809017 -0.309017 0.809017 -0.5 -146.39989 383.27989 236.88 28 'point symmetry operation' ? ? 0.5 -0.309017 0.809017 0.309017 -0.809017 -0.5 0.809017 0.5 -0.309017 0 473.76 0 29 'point symmetry operation' ? ? -0.5 -0.309017 0.809017 -0.309017 -0.809017 -0.5 0.809017 -0.5 0.309017 236.88 620.15989 90.48011 30 'point symmetry operation' ? ? -0.809017 0.5 0.309017 -0.5 -0.309017 -0.809017 -0.309017 -0.809017 0.5 236.88 620.15989 383.27989 31 'point symmetry operation' ? ? -0.5 0.309017 -0.809017 -0.309017 0.809017 0.5 0.809017 0.5 -0.309017 473.76 0 0 32 'point symmetry operation' ? ? 0.5 0.309017 -0.809017 0.309017 0.809017 0.5 0.809017 -0.5 0.309017 236.88 -146.39989 90.48011 33 'point symmetry operation' ? ? 0.809017 -0.5 -0.309017 0.5 0.309017 0.809017 -0.309017 -0.809017 0.5 236.88 -146.39989 383.27989 34 'point symmetry operation' ? ? 0 -1 0 0 0 1 -1 0 0 473.76 0 473.76 35 'point symmetry operation' ? ? -0.809017 -0.5 -0.309017 -0.5 0.309017 0.809017 -0.309017 0.809017 -0.5 620.15989 90.48011 236.88 36 'point symmetry operation' ? ? 0.809017 -0.5 0.309017 -0.5 -0.309017 0.809017 -0.309017 -0.809017 -0.5 90.48011 236.88 620.15989 37 'point symmetry operation' ? ? -0.309017 -0.809017 0.5 -0.809017 0.5 0.309017 -0.5 -0.309017 -0.809017 383.27989 236.88 620.15989 38 'point symmetry operation' ? ? -1 0 0 0 1 0 0 0 -1 473.76 0 473.76 39 'point symmetry operation' ? ? -0.309017 0.809017 -0.5 0.809017 0.5 0.309017 0.5 -0.309017 -0.809017 236.88 -146.39989 383.27989 40 'point symmetry operation' ? ? 0.809017 0.5 -0.309017 0.5 -0.309017 0.809017 0.309017 -0.809017 -0.5 0 0 473.76 41 'point symmetry operation' ? ? -0.309017 0.809017 0.5 -0.809017 -0.5 0.309017 0.5 -0.309017 0.809017 0 473.76 0 42 'point symmetry operation' ? ? 0.309017 0.809017 0.5 -0.809017 0.5 -0.309017 -0.5 -0.309017 0.809017 -146.39989 383.27989 236.88 43 'point symmetry operation' ? ? 0.5 0.309017 0.809017 0.309017 0.809017 -0.5 -0.809017 0.5 0.309017 -146.39989 90.48011 236.88 44 'point symmetry operation' ? ? 0 0 1 1 0 0 0 1 0 0 0 0 45 'point symmetry operation' ? ? -0.5 0.309017 0.809017 0.309017 -0.809017 0.5 0.809017 0.5 0.309017 90.48011 236.88 -146.39989 46 'point symmetry operation' ? ? -0.5 -0.309017 0.809017 0.309017 0.809017 0.5 -0.809017 0.5 -0.309017 236.88 -146.39989 383.27989 47 'point symmetry operation' ? ? -0.809017 0.5 0.309017 0.5 0.309017 0.809017 0.309017 0.809017 -0.5 236.88 -146.39989 90.48011 48 'point symmetry operation' ? ? 0 1 0 0 0 1 1 0 0 0 0 0 49 'point symmetry operation' ? ? 0.809017 0.5 0.309017 -0.5 0.309017 0.809017 0.309017 -0.809017 0.5 -146.39989 90.48011 236.88 50 'point symmetry operation' ? ? 0.5 -0.309017 0.809017 -0.309017 0.809017 0.5 -0.809017 -0.5 0.309017 0 0 473.76 51 'point symmetry operation' ? ? 0.809017 -0.5 -0.309017 -0.5 -0.309017 -0.809017 0.309017 0.809017 -0.5 236.88 620.15989 90.48011 52 'point symmetry operation' ? ? 0 -1 0 0 0 -1 1 0 0 473.76 473.76 0 53 'point symmetry operation' ? ? -0.809017 -0.5 -0.309017 0.5 -0.309017 -0.809017 0.309017 -0.809017 0.5 620.15989 383.27989 236.88 54 'point symmetry operation' ? ? -0.5 0.309017 -0.809017 0.309017 -0.809017 -0.5 -0.809017 -0.5 0.309017 473.76 473.76 473.76 55 'point symmetry operation' ? ? 0.5 0.309017 -0.809017 -0.309017 -0.809017 -0.5 -0.809017 0.5 -0.309017 236.88 620.15989 383.27989 56 'point symmetry operation' ? ? 0 0 -1 1 0 0 0 -1 0 473.76 0 473.76 57 'point symmetry operation' ? ? 0.5 -0.309017 -0.809017 0.309017 -0.809017 0.5 -0.809017 -0.5 -0.309017 383.27989 236.88 620.15989 58 'point symmetry operation' ? ? 0.309017 -0.809017 -0.5 -0.809017 -0.5 0.309017 -0.5 0.309017 -0.809017 473.76 473.76 473.76 59 'point symmetry operation' ? ? -0.309017 -0.809017 -0.5 -0.809017 0.5 -0.309017 0.5 0.309017 -0.809017 620.15989 383.27989 236.88 60 'point symmetry operation' ? ? -0.5 -0.309017 -0.809017 0.309017 0.809017 -0.5 0.809017 -0.5 -0.309017 620.15989 90.48011 236.88 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id F _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 25 _struct_conn.ptnr1_auth_asym_id F _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 25 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id F _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 80 _struct_conn.ptnr2_auth_asym_id F _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 80 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.037 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C14 H28 O2' _chem_comp.formula_weight 228.371 _chem_comp.id MYR _chem_comp.mon_nstd_flag . _chem_comp.name 'MYRISTIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 MYR doub 235 n n C1 O2 MYR sing 236 n n C1 C2 MYR sing 237 n n O2 HO2 MYR sing 238 n n C2 C3 MYR sing 239 n n C2 H21 MYR sing 240 n n C2 H22 MYR sing 241 n n C3 C4 MYR sing 242 n n C3 H31 MYR sing 243 n n C3 H32 MYR sing 244 n n C4 C5 MYR sing 245 n n C4 H41 MYR sing 246 n n C4 H42 MYR sing 247 n n C5 C6 MYR sing 248 n n C5 H51 MYR sing 249 n n C5 H52 MYR sing 250 n n C6 C7 MYR sing 251 n n C6 H61 MYR sing 252 n n C6 H62 MYR sing 253 n n C7 C8 MYR sing 254 n n C7 H71 MYR sing 255 n n C7 H72 MYR sing 256 n n C8 C9 MYR sing 257 n n C8 H81 MYR sing 258 n n C8 H82 MYR sing 259 n n C9 C10 MYR sing 260 n n C9 H91 MYR sing 261 n n C9 H92 MYR sing 262 n n C10 C11 MYR sing 263 n n C10 H101 MYR sing 264 n n C10 H102 MYR sing 265 n n C11 C12 MYR sing 266 n n C11 H111 MYR sing 267 n n C11 H112 MYR sing 268 n n C12 C13 MYR sing 269 n n C12 H121 MYR sing 270 n n C12 H122 MYR sing 271 n n C13 C14 MYR sing 272 n n C13 H131 MYR sing 273 n n C13 H132 MYR sing 274 n n C14 H141 MYR sing 275 n n C14 H142 MYR sing 276 n n C14 H143 MYR sing 277 n n # _atom_sites.entry_id 7C9V _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id G _pdbx_nonpoly_scheme.entity_id 7 _pdbx_nonpoly_scheme.mon_id MYR _pdbx_nonpoly_scheme.pdb_strand_id D _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 101 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id MYR _pdbx_nonpoly_scheme.auth_mon_id MYR _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MYR . . . G 7 229.583 289.192 327.691 1 99.13 ? C1 MYR 101 D 1 HETATM 2 O O1 MYR . . . G 7 228.429 288.841 327.375 1 99.13 ? O1 MYR 101 D 1 HETATM 3 C C2 MYR . . . G 7 230.697 288.192 327.683 1 99.13 ? C2 MYR 101 D 1 HETATM 4 C C3 MYR . . . G 7 231.97 288.913 327.282 1 99.13 ? C3 MYR 101 D 1 HETATM 5 C C4 MYR . . . G 7 232.218 290.117 328.174 1 99.13 ? C4 MYR 101 D 1 HETATM 6 C C5 MYR . . . G 7 233.686 290.5 328.106 1 99.13 ? C5 MYR 101 D 1 HETATM 7 C C6 MYR . . . G 7 233.969 291.771 328.888 1 99.13 ? C6 MYR 101 D 1 HETATM 8 C C7 MYR . . . G 7 233.643 291.617 330.365 1 99.13 ? C7 MYR 101 D 1 HETATM 9 C C8 MYR . . . G 7 234.248 292.789 331.125 1 99.13 ? C8 MYR 101 D 1 HETATM 10 C C9 MYR . . . G 7 233.646 292.937 332.512 1 99.13 ? C9 MYR 101 D 1 HETATM 11 C C10 MYR . . . G 7 234.096 291.812 333.429 1 99.13 ? C10 MYR 101 D 1 HETATM 12 C C11 MYR . . . G 7 232.929 291.306 334.264 1 99.13 ? C11 MYR 101 D 1 HETATM 13 C C12 MYR . . . G 7 232.325 292.433 335.088 1 99.13 ? C12 MYR 101 D 1 HETATM 14 C C13 MYR . . . G 7 230.847 292.181 335.343 1 99.13 ? C13 MYR 101 D 1 HETATM 15 C C14 MYR . . . G 7 230.059 293.487 335.508 1 99.13 ? C14 MYR 101 D 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 348 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 15 #