data_7C9Z # _model_server_result.job_id MTsaNzHjpAFmhyX60OCVQg _model_server_result.datetime_utc '2025-07-16 04:32:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7c9z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":101}' # _entry.id 7C9Z # _exptl.entry_id 7C9Z _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 228.371 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MYRISTIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? 240-meric 240 'complete icosahedral assembly' 1 ? tetrameric 4 'icosahedral asymmetric unit' 2 ? eicosameric 20 'icosahedral pentamer' 3 ? 24-meric 24 'icosahedral 23 hexamer' 4 ? tetrameric 4 'icosahedral asymmetric unit, std point frame' 5 ? 240-meric 240 'crystal asymmetric unit, crystal frame' 6 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 (1-60) A,B,C,D,E,F 2 1 A,B,C,D,E,F 3 (1-5) A,B,C,D,E,F 4 (1,2,6,10,23,24) A,B,C,D,E,F 5 P A,B,C,D,E,F 6 (X0)(1-60) # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] P 'transform to point frame' ? ? 0.5 -0.809017 -0.309017 -0.309017 -0.5 0.809017 -0.809017 -0.309017 -0.5 133.00091 0 348.20091 X0 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'point symmetry operation' ? ? 0.809017 0.309017 -0.5 0.309017 0.5 0.809017 0.5 -0.809017 0.309017 82.19908 -133.00091 215.19999 3 'point symmetry operation' ? ? 0.5 0.809017 -0.309017 0.809017 -0.309017 0.5 0.309017 -0.5 -0.809017 0 0 430.39999 4 'point symmetry operation' ? ? 0.5 0.809017 0.309017 0.809017 -0.309017 -0.5 -0.309017 0.5 -0.809017 -133.00091 215.19999 348.20091 5 'point symmetry operation' ? ? 0.809017 0.309017 0.5 0.309017 0.5 -0.809017 -0.5 0.809017 0.309017 -133.00091 215.2 82.19909 6 'point symmetry operation' ? ? 0.309017 0.5 0.809017 0.5 -0.809017 0.309017 0.809017 0.309017 -0.5 -133.00091 215.19999 82.19908 7 'point symmetry operation' ? ? 0.809017 -0.309017 0.5 0.309017 -0.5 -0.809017 0.5 0.809017 -0.309017 0 430.39999 0 8 'point symmetry operation' ? ? 0.809017 -0.309017 -0.5 -0.309017 0.5 -0.809017 0.5 0.809017 0.309017 215.2 348.20091 -133.00091 9 'point symmetry operation' ? ? 0.309017 0.5 -0.809017 -0.5 0.809017 0.309017 0.809017 0.309017 0.5 215.2 82.19909 -133.00091 10 'point symmetry operation' ? ? 0 1 0 0 0 1 1 0 0 0 0 0 11 'point symmetry operation' ? ? -0.809017 0.309017 -0.5 0.309017 -0.5 -0.809017 -0.5 -0.809017 0.309017 430.4 430.39999 430.4 12 'point symmetry operation' ? ? -0.809017 0.309017 0.5 -0.309017 0.5 -0.809017 -0.5 -0.809017 -0.309017 215.2 348.20091 563.40091 13 'point symmetry operation' ? ? -0.309017 -0.5 0.809017 -0.5 0.809017 0.309017 -0.809017 -0.309017 -0.5 215.2 82.19909 563.40091 14 'point symmetry operation' ? ? 0 -1 0 0 0 1 -1 0 0 430.39999 0 430.4 15 'point symmetry operation' ? ? -0.309017 -0.5 -0.809017 0.5 -0.809017 0.309017 -0.809017 -0.309017 0.5 563.40091 215.2 348.20091 16 'point symmetry operation' ? ? -0.5 -0.809017 -0.309017 -0.809017 0.309017 0.5 -0.309017 0.5 -0.809017 563.40091 215.2 348.20091 17 'point symmetry operation' ? ? -0.809017 -0.309017 -0.5 -0.309017 -0.5 0.809017 -0.5 0.809017 0.309017 563.40091 215.2 82.19909 18 'point symmetry operation' ? ? -1 0 0 0 -1 0 0 0 1 430.4 430.39999 0 19 'point symmetry operation' ? ? -0.809017 -0.309017 0.5 -0.309017 -0.5 -0.809017 0.5 -0.809017 0.309017 348.20091 563.40091 215.2 20 'point symmetry operation' ? ? -0.5 -0.809017 0.309017 -0.809017 0.309017 -0.5 0.309017 -0.5 -0.809017 430.4 430.4 430.39999 21 'point symmetry operation' ? ? -0.309017 0.5 -0.809017 0.5 0.809017 0.309017 0.809017 -0.309017 -0.5 348.20091 -133.00091 215.19999 22 'point symmetry operation' ? ? -0.5 0.809017 0.309017 0.809017 0.309017 0.5 0.309017 0.5 -0.809017 82.19909 -133.00091 215.2 23 'point symmetry operation' ? ? 0 0 1 1 0 0 0 1 0 0 0 0 24 'point symmetry operation' ? ? 0.5 -0.809017 0.309017 0.809017 0.309017 -0.5 0.309017 0.5 0.809017 215.2 82.19908 -133.00091 25 'point symmetry operation' ? ? 0.309017 -0.5 -0.809017 0.5 0.809017 -0.309017 0.809017 -0.309017 0.5 430.4 0 0 26 'point symmetry operation' ? ? -0.5 -0.809017 0.309017 0.809017 -0.309017 0.5 -0.309017 0.5 0.809017 430.4 0 0 27 'point symmetry operation' ? ? -0.5 -0.809017 -0.309017 0.809017 -0.309017 -0.5 0.309017 -0.5 0.809017 563.40091 215.2 82.19908 28 'point symmetry operation' ? ? -0.809017 -0.309017 -0.5 0.309017 0.5 -0.809017 0.5 -0.809017 -0.309017 563.40091 215.2 348.20091 29 'point symmetry operation' ? ? -1 0 0 0 1 0 0 0 -1 430.4 0 430.39999 30 'point symmetry operation' ? ? -0.809017 -0.309017 0.5 0.309017 0.5 0.809017 -0.5 0.809017 -0.309017 348.20091 -133.00091 215.2 31 'point symmetry operation' ? ? 0.809017 0.309017 -0.5 -0.309017 -0.5 -0.809017 -0.5 0.809017 -0.309017 82.19909 563.40091 215.2 32 'point symmetry operation' ? ? 0.5 0.809017 -0.309017 -0.809017 0.309017 -0.5 -0.309017 0.5 0.809017 0 430.4 0 33 'point symmetry operation' ? ? 0.5 0.809017 0.309017 -0.809017 0.309017 0.5 0.309017 -0.5 0.809017 -133.00091 215.2 82.19908 34 'point symmetry operation' ? ? 0.809017 0.309017 0.5 -0.309017 -0.5 0.809017 0.5 -0.809017 -0.309017 -133.00091 215.2 348.20091 35 'point symmetry operation' ? ? 1 0 0 0 -1 0 0 0 -1 0 430.39999 430.4 36 'point symmetry operation' ? ? 0 0 1 -1 0 0 0 -1 0 0 430.4 430.4 37 'point symmetry operation' ? ? 0.5 -0.809017 0.309017 -0.809017 -0.309017 0.5 -0.309017 -0.5 -0.809017 215.2 348.20091 563.40091 38 'point symmetry operation' ? ? 0.309017 -0.5 -0.809017 -0.5 -0.809017 0.309017 -0.809017 0.309017 -0.5 430.39999 430.4 430.4 39 'point symmetry operation' ? ? -0.309017 0.5 -0.809017 -0.5 -0.809017 -0.309017 -0.809017 0.309017 0.5 348.20091 563.40091 215.2 40 'point symmetry operation' ? ? -0.5 0.809017 0.309017 -0.809017 -0.309017 -0.5 -0.309017 -0.5 0.809017 82.19909 563.40091 215.2 41 'point symmetry operation' ? ? -0.309017 0.5 0.809017 0.5 0.809017 -0.309017 -0.809017 0.309017 -0.5 0 0 430.4 42 'point symmetry operation' ? ? 0.309017 -0.5 0.809017 0.5 0.809017 0.309017 -0.809017 0.309017 0.5 82.19908 -133.00091 215.2 43 'point symmetry operation' ? ? 0.5 -0.809017 -0.309017 0.809017 0.309017 0.5 -0.309017 -0.5 0.809017 348.20091 -133.00091 215.2 44 'point symmetry operation' ? ? 0 0 -1 1 0 0 0 -1 0 430.4 0 430.39999 45 'point symmetry operation' ? ? -0.5 0.809017 -0.309017 0.809017 0.309017 -0.5 -0.309017 -0.5 -0.809017 215.2 82.19908 563.40091 46 'point symmetry operation' ? ? 0.809017 -0.309017 -0.5 0.309017 -0.5 0.809017 -0.5 -0.809017 -0.309017 215.2 82.19908 563.40091 47 'point symmetry operation' ? ? 0.309017 0.5 -0.809017 0.5 -0.809017 -0.309017 -0.809017 -0.309017 -0.5 215.2 348.20091 563.40091 48 'point symmetry operation' ? ? 0 1 0 0 0 -1 -1 0 0 0 430.39999 430.4 49 'point symmetry operation' ? ? 0.309017 0.5 0.809017 -0.5 0.809017 -0.309017 -0.809017 -0.309017 0.5 -133.00091 215.2 348.20091 50 'point symmetry operation' ? ? 0.809017 -0.309017 0.5 -0.309017 0.5 0.809017 -0.5 -0.809017 0.309017 0 0 430.4 51 'point symmetry operation' ? ? 0 -1 0 0 0 -1 1 0 0 430.4 430.4 0 52 'point symmetry operation' ? ? -0.309017 -0.5 -0.809017 -0.5 0.809017 -0.309017 0.809017 0.309017 -0.5 563.40091 215.2 82.19908 53 'point symmetry operation' ? ? -0.809017 0.309017 -0.5 -0.309017 0.5 0.809017 0.5 0.809017 -0.309017 430.4 0 0 54 'point symmetry operation' ? ? -0.809017 0.309017 0.5 0.309017 -0.5 0.809017 0.5 0.809017 0.309017 215.2 82.19908 -133.00091 55 'point symmetry operation' ? ? -0.309017 -0.5 0.809017 0.5 -0.809017 -0.309017 0.809017 0.309017 0.5 215.2 348.20091 -133.00091 56 'point symmetry operation' ? ? -0.5 0.809017 -0.309017 -0.809017 -0.309017 0.5 0.309017 0.5 0.809017 215.2 348.20091 -133.00091 57 'point symmetry operation' ? ? -0.309017 0.5 0.809017 -0.5 -0.809017 0.309017 0.809017 -0.309017 0.5 0 430.39999 0 58 'point symmetry operation' ? ? 0.309017 -0.5 0.809017 -0.5 -0.809017 -0.309017 0.809017 -0.309017 -0.5 82.19909 563.40091 215.2 59 'point symmetry operation' ? ? 0.5 -0.809017 -0.309017 -0.809017 -0.309017 -0.5 0.309017 0.5 -0.809017 348.20091 563.40091 215.2 60 'point symmetry operation' ? ? 0 0 -1 -1 0 0 0 1 0 430.4 430.4 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H28 O2' _chem_comp.formula_weight 228.371 _chem_comp.id MYR _chem_comp.mon_nstd_flag . _chem_comp.name 'MYRISTIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 MYR doub 235 n n C1 O2 MYR sing 236 n n C1 C2 MYR sing 237 n n O2 HO2 MYR sing 238 n n C2 C3 MYR sing 239 n n C2 H21 MYR sing 240 n n C2 H22 MYR sing 241 n n C3 C4 MYR sing 242 n n C3 H31 MYR sing 243 n n C3 H32 MYR sing 244 n n C4 C5 MYR sing 245 n n C4 H41 MYR sing 246 n n C4 H42 MYR sing 247 n n C5 C6 MYR sing 248 n n C5 H51 MYR sing 249 n n C5 H52 MYR sing 250 n n C6 C7 MYR sing 251 n n C6 H61 MYR sing 252 n n C6 H62 MYR sing 253 n n C7 C8 MYR sing 254 n n C7 H71 MYR sing 255 n n C7 H72 MYR sing 256 n n C8 C9 MYR sing 257 n n C8 H81 MYR sing 258 n n C8 H82 MYR sing 259 n n C9 C10 MYR sing 260 n n C9 H91 MYR sing 261 n n C9 H92 MYR sing 262 n n C10 C11 MYR sing 263 n n C10 H101 MYR sing 264 n n C10 H102 MYR sing 265 n n C11 C12 MYR sing 266 n n C11 H111 MYR sing 267 n n C11 H112 MYR sing 268 n n C12 C13 MYR sing 269 n n C12 H121 MYR sing 270 n n C12 H122 MYR sing 271 n n C13 C14 MYR sing 272 n n C13 H131 MYR sing 273 n n C13 H132 MYR sing 274 n n C14 H141 MYR sing 275 n n C14 H142 MYR sing 276 n n C14 H143 MYR sing 277 n n # _atom_sites.entry_id 7C9Z _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 PLM A 1 301 301 PLM PLM . F 6 MYR D 1 101 1 MYR MYR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MYR . . . F 6 128.936 154.105 207.692 1 41.57 ? C1 MYR 101 D 1 HETATM 2 O O1 MYR . . . F 6 128.856 153.332 206.715 1 41.57 ? O1 MYR 101 D 1 HETATM 3 O O2 MYR . . . F 6 128.492 155.268 207.585 1 41.57 ? O2 MYR 101 D 1 HETATM 4 C C2 MYR . . . F 6 129.551 153.632 208.984 1 41.57 ? C2 MYR 101 D 1 HETATM 5 C C3 MYR . . . F 6 128.458 153.204 209.953 1 41.57 ? C3 MYR 101 D 1 HETATM 6 C C4 MYR . . . F 6 127.845 154.382 210.694 1 41.57 ? C4 MYR 101 D 1 HETATM 7 C C5 MYR . . . F 6 126.535 153.956 211.338 1 41.57 ? C5 MYR 101 D 1 HETATM 8 C C6 MYR . . . F 6 126.195 154.827 212.542 1 41.57 ? C6 MYR 101 D 1 HETATM 9 C C7 MYR . . . F 6 124.905 154.368 213.211 1 41.57 ? C7 MYR 101 D 1 HETATM 10 C C8 MYR . . . F 6 123.673 154.961 212.536 1 41.57 ? C8 MYR 101 D 1 HETATM 11 C C9 MYR . . . F 6 122.396 154.222 212.918 1 41.57 ? C9 MYR 101 D 1 HETATM 12 C C10 MYR . . . F 6 122.181 153.015 212.013 1 41.57 ? C10 MYR 101 D 1 HETATM 13 C C11 MYR . . . F 6 120.931 152.222 212.377 1 41.57 ? C11 MYR 101 D 1 HETATM 14 C C12 MYR . . . F 6 121.209 151.004 213.259 1 41.57 ? C12 MYR 101 D 1 HETATM 15 C C13 MYR . . . F 6 121.94 149.889 212.511 1 41.57 ? C13 MYR 101 D 1 HETATM 16 C C14 MYR . . . F 6 121.729 148.518 213.139 1 41.57 ? C14 MYR 101 D 1 HETATM 17 H H21 MYR . . . F 6 130.214 152.792 208.786 1 41.57 ? H21 MYR 101 D 1 HETATM 18 H H22 MYR . . . F 6 130.141 154.434 209.425 1 41.57 ? H22 MYR 101 D 1 HETATM 19 H H31 MYR . . . F 6 128.871 152.502 210.674 1 41.57 ? H31 MYR 101 D 1 HETATM 20 H H32 MYR . . . F 6 127.675 152.689 209.401 1 41.57 ? H32 MYR 101 D 1 HETATM 21 H H41 MYR . . . F 6 127.663 155.199 209.998 1 41.57 ? H41 MYR 101 D 1 HETATM 22 H H42 MYR . . . F 6 128.533 154.736 211.459 1 41.57 ? H42 MYR 101 D 1 HETATM 23 H H51 MYR . . . F 6 125.742 154.025 210.598 1 41.57 ? H51 MYR 101 D 1 HETATM 24 H H52 MYR . . . F 6 126.61 152.915 211.647 1 41.57 ? H52 MYR 101 D 1 HETATM 25 H H61 MYR . . . F 6 127.011 154.786 213.262 1 41.57 ? H61 MYR 101 D 1 HETATM 26 H H62 MYR . . . F 6 126.089 155.861 212.225 1 41.57 ? H62 MYR 101 D 1 HETATM 27 H H71 MYR . . . F 6 124.92 154.674 214.255 1 41.57 ? H71 MYR 101 D 1 HETATM 28 H H72 MYR . . . F 6 124.854 153.281 213.186 1 41.57 ? H72 MYR 101 D 1 HETATM 29 H H81 MYR . . . F 6 123.795 154.925 211.456 1 41.57 ? H81 MYR 101 D 1 HETATM 30 H H82 MYR . . . F 6 123.581 156.008 212.822 1 41.57 ? H82 MYR 101 D 1 HETATM 31 H H91 MYR . . . F 6 121.547 154.897 212.823 1 41.57 ? H91 MYR 101 D 1 HETATM 32 H H92 MYR . . . F 6 122.457 153.901 213.958 1 41.57 ? H92 MYR 101 D 1 HETATM 33 H H101 MYR . . . F 6 123.059 152.377 212.062 1 41.57 ? H101 MYR 101 D 1 HETATM 34 H H102 MYR . . . F 6 122.079 153.362 210.987 1 41.57 ? H102 MYR 101 D 1 HETATM 35 H H111 MYR . . . F 6 120.436 151.902 211.461 1 41.57 ? H111 MYR 101 D 1 HETATM 36 H H112 MYR . . . F 6 120.241 152.882 212.898 1 41.57 ? H112 MYR 101 D 1 HETATM 37 H H121 MYR . . . F 6 120.259 150.627 213.636 1 41.57 ? H121 MYR 101 D 1 HETATM 38 H H122 MYR . . . F 6 121.805 151.312 214.117 1 41.57 ? H122 MYR 101 D 1 HETATM 39 H H131 MYR . . . F 6 123.008 150.102 212.509 1 41.57 ? H131 MYR 101 D 1 HETATM 40 H H132 MYR . . . F 6 121.6 149.859 211.479 1 41.57 ? H132 MYR 101 D 1 HETATM 41 H H141 MYR . . . F 6 121.303 148.623 214.135 1 41.57 ? H141 MYR 101 D 1 HETATM 42 H H142 MYR . . . F 6 122.685 148.001 213.204 1 41.57 ? H142 MYR 101 D 1 HETATM 43 H H143 MYR . . . F 6 121.051 147.941 212.512 1 41.57 ? H143 MYR 101 D 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 18 _model_server_stats.element_count 43 #