data_7CB3 # _model_server_result.job_id 6_f94F2VJjAak2_kxCBKsQ _model_server_result.datetime_utc '2024-10-10 04:17:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7cb3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":502}' # _entry.id 7CB3 # _exptl.entry_id 7CB3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7CB3 _cell.length_a 131.407 _cell.length_b 131.407 _cell.length_c 187.187 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7CB3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 174 A GLY 174 1_555 A N MCS 175 A MCS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale2 A C MCS 175 A MCS 175 1_555 A N ALA 176 A ALA 176 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale3 B C GLY 174 B GLY 174 1_555 B N MCS 175 B MCS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale4 B C MCS 175 B MCS 175 1_555 B N ALA 176 B ALA 176 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 307 n n C1 C2 PGE sing 308 n n C1 H1 PGE sing 309 n n C1 H12 PGE sing 310 n n O1 HO1 PGE sing 311 n n C2 O2 PGE sing 312 n n C2 H2 PGE sing 313 n n C2 H22 PGE sing 314 n n O2 C3 PGE sing 315 n n C3 C4 PGE sing 316 n n C3 H3 PGE sing 317 n n C3 H32 PGE sing 318 n n C4 O3 PGE sing 319 n n C4 H4 PGE sing 320 n n C4 H42 PGE sing 321 n n O4 C6 PGE sing 322 n n O4 HO4 PGE sing 323 n n C6 C5 PGE sing 324 n n C6 H6 PGE sing 325 n n C6 H62 PGE sing 326 n n C5 O3 PGE sing 327 n n C5 H5 PGE sing 328 n n C5 H52 PGE sing 329 n n # _atom_sites.entry_id 7CB3 _atom_sites.fract_transf_matrix[1][1] 0.00761 _atom_sites.fract_transf_matrix[1][2] 0.004394 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008787 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005342 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MYR A 1 501 1 MYR MYR . D 3 PGE A 1 502 1 PGE PGE . E 4 ACT A 1 503 2 ACT ACT . F 2 MYR B 1 501 2 MYR MYR . G 3 PGE B 1 502 2 PGE PGE . H 4 ACT B 1 503 1 ACT ACT . I 4 ACT B 1 504 3 ACT ACT . J 5 HOH A 1 601 77 HOH HOH . J 5 HOH A 2 602 32 HOH HOH . J 5 HOH A 3 603 24 HOH HOH . J 5 HOH A 4 604 60 HOH HOH . J 5 HOH A 5 605 66 HOH HOH . J 5 HOH A 6 606 55 HOH HOH . J 5 HOH A 7 607 27 HOH HOH . J 5 HOH A 8 608 18 HOH HOH . J 5 HOH A 9 609 38 HOH HOH . J 5 HOH A 10 610 47 HOH HOH . J 5 HOH A 11 611 28 HOH HOH . J 5 HOH A 12 612 5 HOH HOH . J 5 HOH A 13 613 37 HOH HOH . J 5 HOH A 14 614 11 HOH HOH . J 5 HOH A 15 615 1 HOH HOH . J 5 HOH A 16 616 40 HOH HOH . J 5 HOH A 17 617 19 HOH HOH . J 5 HOH A 18 618 44 HOH HOH . J 5 HOH A 19 619 7 HOH HOH . J 5 HOH A 20 620 67 HOH HOH . J 5 HOH A 21 621 20 HOH HOH . J 5 HOH A 22 622 12 HOH HOH . J 5 HOH A 23 623 17 HOH HOH . J 5 HOH A 24 624 2 HOH HOH . J 5 HOH A 25 625 78 HOH HOH . J 5 HOH A 26 626 42 HOH HOH . J 5 HOH A 27 627 69 HOH HOH . J 5 HOH A 28 628 46 HOH HOH . J 5 HOH A 29 629 65 HOH HOH . J 5 HOH A 30 630 71 HOH HOH . J 5 HOH A 31 631 48 HOH HOH . J 5 HOH A 32 632 8 HOH HOH . J 5 HOH A 33 633 72 HOH HOH . J 5 HOH A 34 634 23 HOH HOH . J 5 HOH A 35 635 76 HOH HOH . J 5 HOH A 36 636 6 HOH HOH . J 5 HOH A 37 637 59 HOH HOH . K 5 HOH B 1 601 43 HOH HOH . K 5 HOH B 2 602 56 HOH HOH . K 5 HOH B 3 603 34 HOH HOH . K 5 HOH B 4 604 35 HOH HOH . K 5 HOH B 5 605 68 HOH HOH . K 5 HOH B 6 606 64 HOH HOH . K 5 HOH B 7 607 31 HOH HOH . K 5 HOH B 8 608 13 HOH HOH . K 5 HOH B 9 609 63 HOH HOH . K 5 HOH B 10 610 81 HOH HOH . K 5 HOH B 11 611 50 HOH HOH . K 5 HOH B 12 612 16 HOH HOH . K 5 HOH B 13 613 9 HOH HOH . K 5 HOH B 14 614 30 HOH HOH . K 5 HOH B 15 615 57 HOH HOH . K 5 HOH B 16 616 52 HOH HOH . K 5 HOH B 17 617 54 HOH HOH . K 5 HOH B 18 618 58 HOH HOH . K 5 HOH B 19 619 4 HOH HOH . K 5 HOH B 20 620 39 HOH HOH . K 5 HOH B 21 621 3 HOH HOH . K 5 HOH B 22 622 25 HOH HOH . K 5 HOH B 23 623 14 HOH HOH . K 5 HOH B 24 624 61 HOH HOH . K 5 HOH B 25 625 33 HOH HOH . K 5 HOH B 26 626 15 HOH HOH . K 5 HOH B 27 627 62 HOH HOH . K 5 HOH B 28 628 36 HOH HOH . K 5 HOH B 29 629 10 HOH HOH . K 5 HOH B 30 630 41 HOH HOH . K 5 HOH B 31 631 80 HOH HOH . K 5 HOH B 32 632 70 HOH HOH . K 5 HOH B 33 633 73 HOH HOH . K 5 HOH B 34 634 21 HOH HOH . K 5 HOH B 35 635 82 HOH HOH . K 5 HOH B 36 636 74 HOH HOH . K 5 HOH B 37 637 26 HOH HOH . K 5 HOH B 38 638 75 HOH HOH . K 5 HOH B 39 639 49 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . G 3 -57.041 63.428 -6.386 1 79.01 ? C1 PGE 502 B 1 HETATM 2 O O1 PGE . . . G 3 -56.218 62.684 -7.296 1 71.05 ? O1 PGE 502 B 1 HETATM 3 C C2 PGE . . . G 3 -56.618 63.165 -4.947 1 82.26 ? C2 PGE 502 B 1 HETATM 4 O O2 PGE . . . G 3 -57.733 63.336 -4.062 1 86.62 ? O2 PGE 502 B 1 HETATM 5 C C3 PGE . . . G 3 -57.443 62.789 -2.78 1 87.03 ? C3 PGE 502 B 1 HETATM 6 C C4 PGE . . . G 3 -58.423 63.245 -1.696 1 88.78 ? C4 PGE 502 B 1 HETATM 7 O O4 PGE . . . G 3 -57.806 63.064 3.095 1 70.22 ? O4 PGE 502 B 1 HETATM 8 C C6 PGE . . . G 3 -57.383 62.533 1.837 1 76.87 ? C6 PGE 502 B 1 HETATM 9 C C5 PGE . . . G 3 -57.919 63.388 0.692 1 82.51 ? C5 PGE 502 B 1 HETATM 10 O O3 PGE . . . G 3 -58.133 62.565 -0.463 1 87.82 ? O3 PGE 502 B 1 # _model_server_stats.io_time_ms 40 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #