data_7CB5 # _model_server_result.job_id BfgNhTHgl3QlRk8l4i6big _model_server_result.datetime_utc '2024-12-27 02:14:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7cb5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":501}' # _entry.id 7CB5 # _exptl.entry_id 7CB5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 276.135 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description '6-PHOSPHOGLUCONIC ACID' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7CB5 _cell.length_a 91.92 _cell.length_b 132.62 _cell.length_c 169.85 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7CB5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,I,J 1 1 C,D,G,H,K,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C6 H13 O10 P' _chem_comp.formula_weight 276.135 _chem_comp.id 6PG _chem_comp.mon_nstd_flag . _chem_comp.name '6-PHOSPHOGLUCONIC ACID' _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 6PG sing 1 n n C1 O1A 6PG doub 2 n n C1 O1 6PG sing 3 n n C2 C3 6PG sing 4 n n C2 O2 6PG sing 5 n n C2 H2 6PG sing 6 n n C3 C4 6PG sing 7 n n C3 O3 6PG sing 8 n n C3 H3 6PG sing 9 n n C4 C5 6PG sing 10 n n C4 O4 6PG sing 11 n n C4 H4 6PG sing 12 n n C5 C6 6PG sing 13 n n C5 O5 6PG sing 14 n n C5 H5 6PG sing 15 n n C6 O6 6PG sing 16 n n C6 H61 6PG sing 17 n n C6 H62 6PG sing 18 n n O1 HO1 6PG sing 19 n n O2 HO2 6PG sing 20 n n O3 HO3 6PG sing 21 n n O4 HO4 6PG sing 22 n n O5 HO5 6PG sing 23 n n O6 P 6PG sing 24 n n P O1P 6PG doub 25 n n P O2P 6PG sing 26 n n P O3P 6PG sing 27 n n O2P HOP2 6PG sing 28 n n O3P HOP3 6PG sing 29 n n # _atom_sites.entry_id 7CB5 _atom_sites.fract_transf_matrix[1][1] 0.010879 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00754 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005888 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 6PG A 1 501 471 6PG 6PG . F 2 6PG B 1 501 471 6PG 6PG . G 2 6PG C 1 501 471 6PG 6PG . H 2 6PG D 1 501 471 6PG 6PG . I 3 HOH A 1 601 13 HOH HOH . I 3 HOH A 2 602 98 HOH HOH . I 3 HOH A 3 603 63 HOH HOH . I 3 HOH A 4 604 96 HOH HOH . I 3 HOH A 5 605 45 HOH HOH . I 3 HOH A 6 606 30 HOH HOH . I 3 HOH A 7 607 65 HOH HOH . I 3 HOH A 8 608 62 HOH HOH . I 3 HOH A 9 609 26 HOH HOH . I 3 HOH A 10 610 1 HOH HOH . I 3 HOH A 11 611 24 HOH HOH . I 3 HOH A 12 612 69 HOH HOH . I 3 HOH A 13 613 95 HOH HOH . I 3 HOH A 14 614 114 HOH HOH . I 3 HOH A 15 615 19 HOH HOH . I 3 HOH A 16 616 60 HOH HOH . I 3 HOH A 17 617 84 HOH HOH . I 3 HOH A 18 618 9 HOH HOH . I 3 HOH A 19 619 66 HOH HOH . I 3 HOH A 20 620 14 HOH HOH . I 3 HOH A 21 621 37 HOH HOH . I 3 HOH A 22 622 42 HOH HOH . I 3 HOH A 23 623 94 HOH HOH . I 3 HOH A 24 624 90 HOH HOH . I 3 HOH A 25 625 7 HOH HOH . I 3 HOH A 26 626 83 HOH HOH . I 3 HOH A 27 627 5 HOH HOH . I 3 HOH A 28 628 131 HOH HOH . I 3 HOH A 29 629 64 HOH HOH . I 3 HOH A 30 630 21 HOH HOH . I 3 HOH A 31 631 76 HOH HOH . I 3 HOH A 32 632 58 HOH HOH . I 3 HOH A 33 633 72 HOH HOH . I 3 HOH A 34 634 118 HOH HOH . I 3 HOH A 35 635 125 HOH HOH . I 3 HOH A 36 636 116 HOH HOH . I 3 HOH A 37 637 49 HOH HOH . I 3 HOH A 38 638 100 HOH HOH . I 3 HOH A 39 639 93 HOH HOH . I 3 HOH A 40 640 44 HOH HOH . I 3 HOH A 41 641 104 HOH HOH . I 3 HOH A 42 642 48 HOH HOH . I 3 HOH A 43 643 47 HOH HOH . I 3 HOH A 44 644 113 HOH HOH . I 3 HOH A 45 645 61 HOH HOH . I 3 HOH A 46 646 40 HOH HOH . I 3 HOH A 47 647 102 HOH HOH . I 3 HOH A 48 648 53 HOH HOH . I 3 HOH A 49 649 85 HOH HOH . I 3 HOH A 50 650 55 HOH HOH . I 3 HOH A 51 651 123 HOH HOH . I 3 HOH A 52 652 112 HOH HOH . I 3 HOH A 53 653 80 HOH HOH . I 3 HOH A 54 654 101 HOH HOH . I 3 HOH A 55 655 121 HOH HOH . I 3 HOH A 56 656 111 HOH HOH . I 3 HOH A 57 657 109 HOH HOH . I 3 HOH A 58 658 108 HOH HOH . J 3 HOH B 1 601 54 HOH HOH . J 3 HOH B 2 602 10 HOH HOH . J 3 HOH B 3 603 32 HOH HOH . J 3 HOH B 4 604 18 HOH HOH . J 3 HOH B 5 605 51 HOH HOH . J 3 HOH B 6 606 91 HOH HOH . J 3 HOH B 7 607 59 HOH HOH . J 3 HOH B 8 608 3 HOH HOH . J 3 HOH B 9 609 34 HOH HOH . J 3 HOH B 10 610 86 HOH HOH . J 3 HOH B 11 611 126 HOH HOH . J 3 HOH B 12 612 103 HOH HOH . J 3 HOH B 13 613 4 HOH HOH . J 3 HOH B 14 614 12 HOH HOH . J 3 HOH B 15 615 117 HOH HOH . J 3 HOH B 16 616 127 HOH HOH . J 3 HOH B 17 617 70 HOH HOH . J 3 HOH B 18 618 16 HOH HOH . J 3 HOH B 19 619 29 HOH HOH . J 3 HOH B 20 620 15 HOH HOH . J 3 HOH B 21 621 27 HOH HOH . J 3 HOH B 22 622 110 HOH HOH . J 3 HOH B 23 623 8 HOH HOH . J 3 HOH B 24 624 92 HOH HOH . J 3 HOH B 25 625 20 HOH HOH . J 3 HOH B 26 626 56 HOH HOH . J 3 HOH B 27 627 97 HOH HOH . J 3 HOH B 28 628 81 HOH HOH . J 3 HOH B 29 629 25 HOH HOH . J 3 HOH B 30 630 6 HOH HOH . J 3 HOH B 31 631 23 HOH HOH . J 3 HOH B 32 632 46 HOH HOH . J 3 HOH B 33 633 106 HOH HOH . J 3 HOH B 34 634 120 HOH HOH . J 3 HOH B 35 635 115 HOH HOH . J 3 HOH B 36 636 122 HOH HOH . J 3 HOH B 37 637 71 HOH HOH . K 3 HOH C 1 601 107 HOH HOH . K 3 HOH C 2 602 36 HOH HOH . K 3 HOH C 3 603 22 HOH HOH . K 3 HOH C 4 604 129 HOH HOH . K 3 HOH C 5 605 130 HOH HOH . K 3 HOH C 6 606 78 HOH HOH . K 3 HOH C 7 607 28 HOH HOH . K 3 HOH C 8 608 82 HOH HOH . K 3 HOH C 9 609 67 HOH HOH . K 3 HOH C 10 610 73 HOH HOH . K 3 HOH C 11 611 38 HOH HOH . K 3 HOH C 12 612 33 HOH HOH . K 3 HOH C 13 613 52 HOH HOH . K 3 HOH C 14 614 2 HOH HOH . K 3 HOH C 15 615 79 HOH HOH . K 3 HOH C 16 616 105 HOH HOH . K 3 HOH C 17 617 43 HOH HOH . K 3 HOH C 18 618 88 HOH HOH . K 3 HOH C 19 619 31 HOH HOH . K 3 HOH C 20 620 35 HOH HOH . K 3 HOH C 21 621 119 HOH HOH . K 3 HOH C 22 622 57 HOH HOH . K 3 HOH C 23 623 128 HOH HOH . K 3 HOH C 24 624 99 HOH HOH . L 3 HOH D 1 601 41 HOH HOH . L 3 HOH D 2 602 17 HOH HOH . L 3 HOH D 3 603 89 HOH HOH . L 3 HOH D 4 604 87 HOH HOH . L 3 HOH D 5 605 75 HOH HOH . L 3 HOH D 6 606 50 HOH HOH . L 3 HOH D 7 607 39 HOH HOH . L 3 HOH D 8 608 11 HOH HOH . L 3 HOH D 9 609 77 HOH HOH . L 3 HOH D 10 610 124 HOH HOH . L 3 HOH D 11 611 74 HOH HOH . L 3 HOH D 12 612 68 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 6PG . . . E 2 -4.864 -46.505 -32.215 1 59.33 ? C1 6PG 501 A 1 HETATM 2 C C2 6PG . . . E 2 -4.576 -45.171 -31.59 1 62.4 ? C2 6PG 501 A 1 HETATM 3 C C3 6PG . . . E 2 -5.572 -44.135 -32.091 1 61.79 ? C3 6PG 501 A 1 HETATM 4 C C4 6PG . . . E 2 -6.132 -43.327 -30.926 1 66.52 ? C4 6PG 501 A 1 HETATM 5 C C5 6PG . . . E 2 -7.396 -42.589 -31.345 1 67.94 ? C5 6PG 501 A 1 HETATM 6 C C6 6PG . . . E 2 -7.073 -41.488 -32.35 1 66.67 ? C6 6PG 501 A 1 HETATM 7 O O1A 6PG . . . E 2 -3.985 -47.008 -32.942 1 58.25 ? O1A 6PG 501 A 1 HETATM 8 O O1 6PG . . . E 2 -5.961 -47.063 -31.986 1 58.99 ? O1 6PG 501 A 1 HETATM 9 O O2 6PG . . . E 2 -4.656 -45.27 -30.162 1 61.56 ? O2 6PG 501 A 1 HETATM 10 O O3 6PG . . . E 2 -6.642 -44.786 -32.783 1 65.13 ? O3 6PG 501 A 1 HETATM 11 O O4 6PG . . . E 2 -6.429 -44.198 -29.828 1 58.88 ? O4 6PG 501 A 1 HETATM 12 O O5 6PG . . . E 2 -8.328 -43.521 -31.909 1 64.61 ? O5 6PG 501 A 1 HETATM 13 O O6 6PG . . . E 2 -6.493 -40.401 -31.636 1 69.81 ? O6 6PG 501 A 1 HETATM 14 P P 6PG . . . E 2 -6.617 -38.887 -32.171 1 67.36 ? P 6PG 501 A 1 HETATM 15 O O1P 6PG . . . E 2 -6.603 -38.99 -33.677 1 65.18 ? O1P 6PG 501 A 1 HETATM 16 O O2P 6PG . . . E 2 -7.947 -38.452 -31.611 1 72.74 ? O2P 6PG 501 A 1 HETATM 17 O O3P 6PG . . . E 2 -5.408 -38.193 -31.591 1 66.7 ? O3P 6PG 501 A 1 # _model_server_stats.io_time_ms 40 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 30 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 17 #