data_7CDC # _model_server_result.job_id iY28CzHV-km6KLH3FTd-Pg _model_server_result.datetime_utc '2024-11-23 01:28:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7cdc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":901}' # _entry.id 7CDC # _exptl.entry_id 7CDC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7CDC _cell.length_a 121.466 _cell.length_b 180.689 _cell.length_c 232.682 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7CDC _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 83 n n PA O2A FAD sing 84 n n PA O5B FAD sing 85 n n PA O3P FAD sing 86 n n O2A HOA2 FAD sing 87 n n O5B C5B FAD sing 88 n n C5B C4B FAD sing 89 n n C5B H51A FAD sing 90 n n C5B H52A FAD sing 91 n n C4B O4B FAD sing 92 n n C4B C3B FAD sing 93 n n C4B H4B FAD sing 94 n n O4B C1B FAD sing 95 n n C3B O3B FAD sing 96 n n C3B C2B FAD sing 97 n n C3B H3B FAD sing 98 n n O3B HO3A FAD sing 99 n n C2B O2B FAD sing 100 n n C2B C1B FAD sing 101 n n C2B H2B FAD sing 102 n n O2B HO2A FAD sing 103 n n C1B N9A FAD sing 104 n n C1B H1B FAD sing 105 n n N9A C8A FAD sing 106 n y N9A C4A FAD sing 107 n y C8A N7A FAD doub 108 n y C8A H8A FAD sing 109 n n N7A C5A FAD sing 110 n y C5A C6A FAD sing 111 n y C5A C4A FAD doub 112 n y C6A N6A FAD sing 113 n n C6A N1A FAD doub 114 n y N6A H61A FAD sing 115 n n N6A H62A FAD sing 116 n n N1A C2A FAD sing 117 n y C2A N3A FAD doub 118 n y C2A H2A FAD sing 119 n n N3A C4A FAD sing 120 n y N1 C2 FAD sing 121 n n N1 C10 FAD doub 122 n n C2 O2 FAD doub 123 n n C2 N3 FAD sing 124 n n N3 C4 FAD sing 125 n n N3 HN3 FAD sing 126 n n C4 O4 FAD doub 127 n n C4 C4X FAD sing 128 n n C4X N5 FAD doub 129 n n C4X C10 FAD sing 130 n n N5 C5X FAD sing 131 n n C5X C6 FAD doub 132 n y C5X C9A FAD sing 133 n y C6 C7 FAD sing 134 n y C6 H6 FAD sing 135 n n C7 C7M FAD sing 136 n n C7 C8 FAD doub 137 n y C7M HM71 FAD sing 138 n n C7M HM72 FAD sing 139 n n C7M HM73 FAD sing 140 n n C8 C8M FAD sing 141 n n C8 C9 FAD sing 142 n y C8M HM81 FAD sing 143 n n C8M HM82 FAD sing 144 n n C8M HM83 FAD sing 145 n n C9 C9A FAD doub 146 n y C9 H9 FAD sing 147 n n C9A N10 FAD sing 148 n n N10 C10 FAD sing 149 n n N10 C1' FAD sing 150 n n C1' C2' FAD sing 151 n n C1' "H1'1" FAD sing 152 n n C1' "H1'2" FAD sing 153 n n C2' O2' FAD sing 154 n n C2' C3' FAD sing 155 n n C2' H2' FAD sing 156 n n O2' HO2' FAD sing 157 n n C3' O3' FAD sing 158 n n C3' C4' FAD sing 159 n n C3' H3' FAD sing 160 n n O3' HO3' FAD sing 161 n n C4' O4' FAD sing 162 n n C4' C5' FAD sing 163 n n C4' H4' FAD sing 164 n n O4' HO4' FAD sing 165 n n C5' O5' FAD sing 166 n n C5' "H5'1" FAD sing 167 n n C5' "H5'2" FAD sing 168 n n O5' P FAD sing 169 n n P O1P FAD doub 170 n n P O2P FAD sing 171 n n P O3P FAD sing 172 n n O2P HOP2 FAD sing 173 n n # _atom_sites.entry_id 7CDC _atom_sites.fract_transf_matrix[1][1] 0.008233 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005534 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004298 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 FAD A 1 901 905 FAD FAD . E 5 GOL A 1 902 1001 GOL GOL . F 5 GOL A 1 903 1101 GOL GOL . G 6 HOH A 1 1001 34 HOH HOH . G 6 HOH A 2 1002 90 HOH HOH . G 6 HOH A 3 1003 65 HOH HOH . G 6 HOH A 4 1004 9 HOH HOH . G 6 HOH A 5 1005 20 HOH HOH . G 6 HOH A 6 1006 12 HOH HOH . G 6 HOH A 7 1007 24 HOH HOH . G 6 HOH A 8 1008 46 HOH HOH . G 6 HOH A 9 1009 21 HOH HOH . G 6 HOH A 10 1010 40 HOH HOH . G 6 HOH A 11 1011 31 HOH HOH . G 6 HOH A 12 1012 10 HOH HOH . G 6 HOH A 13 1013 43 HOH HOH . G 6 HOH A 14 1014 4 HOH HOH . G 6 HOH A 15 1015 3 HOH HOH . G 6 HOH A 16 1016 42 HOH HOH . G 6 HOH A 17 1017 86 HOH HOH . G 6 HOH A 18 1018 93 HOH HOH . G 6 HOH A 19 1019 96 HOH HOH . G 6 HOH A 20 1020 47 HOH HOH . G 6 HOH A 21 1021 41 HOH HOH . G 6 HOH A 22 1022 64 HOH HOH . G 6 HOH A 23 1023 62 HOH HOH . G 6 HOH A 24 1024 32 HOH HOH . G 6 HOH A 25 1025 36 HOH HOH . G 6 HOH A 26 1026 33 HOH HOH . G 6 HOH A 27 1027 19 HOH HOH . G 6 HOH A 28 1028 73 HOH HOH . G 6 HOH A 29 1029 29 HOH HOH . G 6 HOH A 30 1030 84 HOH HOH . G 6 HOH A 31 1031 52 HOH HOH . G 6 HOH A 32 1032 66 HOH HOH . G 6 HOH A 33 1033 25 HOH HOH . G 6 HOH A 34 1034 60 HOH HOH . G 6 HOH A 35 1035 49 HOH HOH . G 6 HOH A 36 1036 51 HOH HOH . G 6 HOH A 37 1037 98 HOH HOH . G 6 HOH A 38 1038 15 HOH HOH . G 6 HOH A 39 1039 5 HOH HOH . G 6 HOH A 40 1040 26 HOH HOH . G 6 HOH A 41 1041 44 HOH HOH . G 6 HOH A 42 1042 13 HOH HOH . G 6 HOH A 43 1043 30 HOH HOH . G 6 HOH A 44 1044 50 HOH HOH . G 6 HOH A 45 1045 83 HOH HOH . G 6 HOH A 46 1046 95 HOH HOH . G 6 HOH A 47 1047 8 HOH HOH . G 6 HOH A 48 1048 11 HOH HOH . G 6 HOH A 49 1049 2 HOH HOH . G 6 HOH A 50 1050 100 HOH HOH . G 6 HOH A 51 1051 56 HOH HOH . G 6 HOH A 52 1052 22 HOH HOH . G 6 HOH A 53 1053 14 HOH HOH . G 6 HOH A 54 1054 1 HOH HOH . G 6 HOH A 55 1055 35 HOH HOH . G 6 HOH A 56 1056 18 HOH HOH . G 6 HOH A 57 1057 23 HOH HOH . G 6 HOH A 58 1058 99 HOH HOH . G 6 HOH A 59 1059 7 HOH HOH . G 6 HOH A 60 1060 53 HOH HOH . G 6 HOH A 61 1061 16 HOH HOH . G 6 HOH A 62 1062 85 HOH HOH . G 6 HOH A 63 1063 77 HOH HOH . G 6 HOH A 64 1064 38 HOH HOH . G 6 HOH A 65 1065 94 HOH HOH . G 6 HOH A 66 1066 54 HOH HOH . G 6 HOH A 67 1067 79 HOH HOH . G 6 HOH A 68 1068 75 HOH HOH . G 6 HOH A 69 1069 80 HOH HOH . G 6 HOH A 70 1070 6 HOH HOH . G 6 HOH A 71 1071 101 HOH HOH . G 6 HOH A 72 1072 57 HOH HOH . G 6 HOH A 73 1073 59 HOH HOH . G 6 HOH A 74 1074 82 HOH HOH . G 6 HOH A 75 1075 70 HOH HOH . G 6 HOH A 76 1076 27 HOH HOH . G 6 HOH A 77 1077 48 HOH HOH . G 6 HOH A 78 1078 69 HOH HOH . G 6 HOH A 79 1079 61 HOH HOH . G 6 HOH A 80 1080 72 HOH HOH . G 6 HOH A 81 1081 74 HOH HOH . G 6 HOH A 82 1082 78 HOH HOH . G 6 HOH A 83 1083 92 HOH HOH . G 6 HOH A 84 1084 45 HOH HOH . G 6 HOH A 85 1085 39 HOH HOH . G 6 HOH A 86 1086 88 HOH HOH . G 6 HOH A 87 1087 71 HOH HOH . G 6 HOH A 88 1088 68 HOH HOH . G 6 HOH A 89 1089 97 HOH HOH . G 6 HOH A 90 1090 63 HOH HOH . G 6 HOH A 91 1091 76 HOH HOH . G 6 HOH A 92 1092 67 HOH HOH . G 6 HOH A 93 1093 55 HOH HOH . G 6 HOH A 94 1094 81 HOH HOH . G 6 HOH A 95 1095 87 HOH HOH . G 6 HOH A 96 1096 89 HOH HOH . G 6 HOH A 97 1098 103 HOH HOH . H 6 HOH B 1 501 17 HOH HOH . H 6 HOH B 2 502 91 HOH HOH . I 6 HOH C 1 101 37 HOH HOH . I 6 HOH C 2 102 28 HOH HOH . I 6 HOH C 3 103 58 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . D 4 6.424 68.456 28.911 1 55.25 ? PA FAD 901 A 1 HETATM 2 O O1A FAD . . . D 4 5.475 68.938 29.96 1 51.84 ? O1A FAD 901 A 1 HETATM 3 O O2A FAD . . . D 4 7.709 67.834 29.344 1 56.96 ? O2A FAD 901 A 1 HETATM 4 O O5B FAD . . . D 4 6.756 69.652 27.894 1 59.56 ? O5B FAD 901 A 1 HETATM 5 C C5B FAD . . . D 4 5.821 70.744 27.701 1 57.12 ? C5B FAD 901 A 1 HETATM 6 C C4B FAD . . . D 4 6.526 72.049 27.972 1 55.37 ? C4B FAD 901 A 1 HETATM 7 O O4B FAD . . . D 4 5.586 73.136 27.78 1 55.9 ? O4B FAD 901 A 1 HETATM 8 C C3B FAD . . . D 4 7.086 72.232 29.393 1 54.33 ? C3B FAD 901 A 1 HETATM 9 O O3B FAD . . . D 4 8.472 72.543 29.351 1 55.59 ? O3B FAD 901 A 1 HETATM 10 C C2B FAD . . . D 4 6.255 73.387 29.97 1 53.99 ? C2B FAD 901 A 1 HETATM 11 O O2B FAD . . . D 4 6.964 74.189 30.89 1 52.89 ? O2B FAD 901 A 1 HETATM 12 C C1B FAD . . . D 4 5.909 74.149 28.697 1 53.97 ? C1B FAD 901 A 1 HETATM 13 N N9A FAD . . . D 4 4.785 75.076 28.788 1 52.55 ? N9A FAD 901 A 1 HETATM 14 C C8A FAD . . . D 4 3.611 74.922 29.483 1 52.55 ? C8A FAD 901 A 1 HETATM 15 N N7A FAD . . . D 4 2.807 75.954 29.354 1 52.91 ? N7A FAD 901 A 1 HETATM 16 C C5A FAD . . . D 4 3.491 76.83 28.52 1 52.69 ? C5A FAD 901 A 1 HETATM 17 C C6A FAD . . . D 4 3.17 78.1 27.998 1 50.89 ? C6A FAD 901 A 1 HETATM 18 N N6A FAD . . . D 4 2.031 78.737 28.252 1 50.1 ? N6A FAD 901 A 1 HETATM 19 N N1A FAD . . . D 4 4.083 78.692 27.191 1 51.61 ? N1A FAD 901 A 1 HETATM 20 C C2A FAD . . . D 4 5.232 78.046 26.94 1 53.2 ? C2A FAD 901 A 1 HETATM 21 N N3A FAD . . . D 4 5.641 76.856 27.375 1 53.75 ? N3A FAD 901 A 1 HETATM 22 C C4A FAD . . . D 4 4.712 76.295 28.168 1 52.31 ? C4A FAD 901 A 1 HETATM 23 N N1 FAD . . . D 4 7.792 58.806 31.684 1 67.33 ? N1 FAD 901 A 1 HETATM 24 C C2 FAD . . . D 4 8.582 57.723 31.526 1 69.82 ? C2 FAD 901 A 1 HETATM 25 O O2 FAD . . . D 4 8.856 57.296 30.402 1 69.73 ? O2 FAD 901 A 1 HETATM 26 N N3 FAD . . . D 4 9.072 57.033 32.591 1 71.02 ? N3 FAD 901 A 1 HETATM 27 C C4 FAD . . . D 4 8.811 57.409 33.886 1 69.17 ? C4 FAD 901 A 1 HETATM 28 O O4 FAD . . . D 4 9.297 56.773 34.811 1 70.73 ? O4 FAD 901 A 1 HETATM 29 C C4X FAD . . . D 4 8.038 58.567 34.09 1 68.47 ? C4X FAD 901 A 1 HETATM 30 N N5 FAD . . . D 4 7.806 58.962 35.317 1 68.46 ? N5 FAD 901 A 1 HETATM 31 C C5X FAD . . . D 4 7.101 60.124 35.482 1 68 ? C5X FAD 901 A 1 HETATM 32 C C6 FAD . . . D 4 6.896 60.592 36.792 1 67.44 ? C6 FAD 901 A 1 HETATM 33 C C7 FAD . . . D 4 6.235 61.771 37.04 1 69.06 ? C7 FAD 901 A 1 HETATM 34 C C7M FAD . . . D 4 6.06 62.246 38.462 1 69.17 ? C7M FAD 901 A 1 HETATM 35 C C8 FAD . . . D 4 5.724 62.522 35.945 1 69.56 ? C8 FAD 901 A 1 HETATM 36 C C8M FAD . . . D 4 4.996 63.821 36.172 1 70.15 ? C8M FAD 901 A 1 HETATM 37 C C9 FAD . . . D 4 5.869 62.042 34.659 1 68.08 ? C9 FAD 901 A 1 HETATM 38 C C9A FAD . . . D 4 6.578 60.857 34.396 1 67.69 ? C9A FAD 901 A 1 HETATM 39 N N10 FAD . . . D 4 6.799 60.372 33.106 1 66.43 ? N10 FAD 901 A 1 HETATM 40 C C10 FAD . . . D 4 7.553 59.23 32.907 1 67.47 ? C10 FAD 901 A 1 HETATM 41 C C1' FAD . . . D 4 6.237 61.073 31.937 1 66.42 ? C1' FAD 901 A 1 HETATM 42 C C2' FAD . . . D 4 7.173 62.045 31.271 1 64.41 ? C2' FAD 901 A 1 HETATM 43 O O2' FAD . . . D 4 7.731 62.944 32.222 1 63.98 ? O2' FAD 901 A 1 HETATM 44 C C3' FAD . . . D 4 6.359 62.819 30.23 1 63.01 ? C3' FAD 901 A 1 HETATM 45 O O3' FAD . . . D 4 5.519 61.94 29.479 1 58.32 ? O3' FAD 901 A 1 HETATM 46 C C4' FAD . . . D 4 7.193 63.625 29.239 1 61.92 ? C4' FAD 901 A 1 HETATM 47 O O4' FAD . . . D 4 8.417 64.05 29.844 1 63.22 ? O4' FAD 901 A 1 HETATM 48 C C5' FAD . . . D 4 6.416 64.826 28.764 1 60.34 ? C5' FAD 901 A 1 HETATM 49 O O5' FAD . . . D 4 6.961 65.306 27.521 1 57.4 ? O5' FAD 901 A 1 HETATM 50 P P FAD . . . D 4 6.193 66.481 26.755 1 56.92 ? P FAD 901 A 1 HETATM 51 O O1P FAD . . . D 4 7.241 67.208 25.977 1 58.28 ? O1P FAD 901 A 1 HETATM 52 O O2P FAD . . . D 4 4.999 65.892 26.073 1 50.8 ? O2P FAD 901 A 1 HETATM 53 O O3P FAD . . . D 4 5.675 67.42 27.949 1 53.64 ? O3P FAD 901 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 53 #