data_7CDC # _model_server_result.job_id iVYZ27fcgljdNQqdBNFpqw _model_server_result.datetime_utc '2024-11-23 01:10:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7cdc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":903}' # _entry.id 7CDC # _exptl.entry_id 7CDC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7CDC _cell.length_a 121.466 _cell.length_b 180.689 _cell.length_c 232.682 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7CDC _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 220 n n C1 C2 GOL sing 221 n n C1 H11 GOL sing 222 n n C1 H12 GOL sing 223 n n O1 HO1 GOL sing 224 n n C2 O2 GOL sing 225 n n C2 C3 GOL sing 226 n n C2 H2 GOL sing 227 n n O2 HO2 GOL sing 228 n n C3 O3 GOL sing 229 n n C3 H31 GOL sing 230 n n C3 H32 GOL sing 231 n n O3 HO3 GOL sing 232 n n # _atom_sites.entry_id 7CDC _atom_sites.fract_transf_matrix[1][1] 0.008233 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005534 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004298 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 FAD A 1 901 905 FAD FAD . E 5 GOL A 1 902 1001 GOL GOL . F 5 GOL A 1 903 1101 GOL GOL . G 6 HOH A 1 1001 34 HOH HOH . G 6 HOH A 2 1002 90 HOH HOH . G 6 HOH A 3 1003 65 HOH HOH . G 6 HOH A 4 1004 9 HOH HOH . G 6 HOH A 5 1005 20 HOH HOH . G 6 HOH A 6 1006 12 HOH HOH . G 6 HOH A 7 1007 24 HOH HOH . G 6 HOH A 8 1008 46 HOH HOH . G 6 HOH A 9 1009 21 HOH HOH . G 6 HOH A 10 1010 40 HOH HOH . G 6 HOH A 11 1011 31 HOH HOH . G 6 HOH A 12 1012 10 HOH HOH . G 6 HOH A 13 1013 43 HOH HOH . G 6 HOH A 14 1014 4 HOH HOH . G 6 HOH A 15 1015 3 HOH HOH . G 6 HOH A 16 1016 42 HOH HOH . G 6 HOH A 17 1017 86 HOH HOH . G 6 HOH A 18 1018 93 HOH HOH . G 6 HOH A 19 1019 96 HOH HOH . G 6 HOH A 20 1020 47 HOH HOH . G 6 HOH A 21 1021 41 HOH HOH . G 6 HOH A 22 1022 64 HOH HOH . G 6 HOH A 23 1023 62 HOH HOH . G 6 HOH A 24 1024 32 HOH HOH . G 6 HOH A 25 1025 36 HOH HOH . G 6 HOH A 26 1026 33 HOH HOH . G 6 HOH A 27 1027 19 HOH HOH . G 6 HOH A 28 1028 73 HOH HOH . G 6 HOH A 29 1029 29 HOH HOH . G 6 HOH A 30 1030 84 HOH HOH . G 6 HOH A 31 1031 52 HOH HOH . G 6 HOH A 32 1032 66 HOH HOH . G 6 HOH A 33 1033 25 HOH HOH . G 6 HOH A 34 1034 60 HOH HOH . G 6 HOH A 35 1035 49 HOH HOH . G 6 HOH A 36 1036 51 HOH HOH . G 6 HOH A 37 1037 98 HOH HOH . G 6 HOH A 38 1038 15 HOH HOH . G 6 HOH A 39 1039 5 HOH HOH . G 6 HOH A 40 1040 26 HOH HOH . G 6 HOH A 41 1041 44 HOH HOH . G 6 HOH A 42 1042 13 HOH HOH . G 6 HOH A 43 1043 30 HOH HOH . G 6 HOH A 44 1044 50 HOH HOH . G 6 HOH A 45 1045 83 HOH HOH . G 6 HOH A 46 1046 95 HOH HOH . G 6 HOH A 47 1047 8 HOH HOH . G 6 HOH A 48 1048 11 HOH HOH . G 6 HOH A 49 1049 2 HOH HOH . G 6 HOH A 50 1050 100 HOH HOH . G 6 HOH A 51 1051 56 HOH HOH . G 6 HOH A 52 1052 22 HOH HOH . G 6 HOH A 53 1053 14 HOH HOH . G 6 HOH A 54 1054 1 HOH HOH . G 6 HOH A 55 1055 35 HOH HOH . G 6 HOH A 56 1056 18 HOH HOH . G 6 HOH A 57 1057 23 HOH HOH . G 6 HOH A 58 1058 99 HOH HOH . G 6 HOH A 59 1059 7 HOH HOH . G 6 HOH A 60 1060 53 HOH HOH . G 6 HOH A 61 1061 16 HOH HOH . G 6 HOH A 62 1062 85 HOH HOH . G 6 HOH A 63 1063 77 HOH HOH . G 6 HOH A 64 1064 38 HOH HOH . G 6 HOH A 65 1065 94 HOH HOH . G 6 HOH A 66 1066 54 HOH HOH . G 6 HOH A 67 1067 79 HOH HOH . G 6 HOH A 68 1068 75 HOH HOH . G 6 HOH A 69 1069 80 HOH HOH . G 6 HOH A 70 1070 6 HOH HOH . G 6 HOH A 71 1071 101 HOH HOH . G 6 HOH A 72 1072 57 HOH HOH . G 6 HOH A 73 1073 59 HOH HOH . G 6 HOH A 74 1074 82 HOH HOH . G 6 HOH A 75 1075 70 HOH HOH . G 6 HOH A 76 1076 27 HOH HOH . G 6 HOH A 77 1077 48 HOH HOH . G 6 HOH A 78 1078 69 HOH HOH . G 6 HOH A 79 1079 61 HOH HOH . G 6 HOH A 80 1080 72 HOH HOH . G 6 HOH A 81 1081 74 HOH HOH . G 6 HOH A 82 1082 78 HOH HOH . G 6 HOH A 83 1083 92 HOH HOH . G 6 HOH A 84 1084 45 HOH HOH . G 6 HOH A 85 1085 39 HOH HOH . G 6 HOH A 86 1086 88 HOH HOH . G 6 HOH A 87 1087 71 HOH HOH . G 6 HOH A 88 1088 68 HOH HOH . G 6 HOH A 89 1089 97 HOH HOH . G 6 HOH A 90 1090 63 HOH HOH . G 6 HOH A 91 1091 76 HOH HOH . G 6 HOH A 92 1092 67 HOH HOH . G 6 HOH A 93 1093 55 HOH HOH . G 6 HOH A 94 1094 81 HOH HOH . G 6 HOH A 95 1095 87 HOH HOH . G 6 HOH A 96 1096 89 HOH HOH . G 6 HOH A 97 1098 103 HOH HOH . H 6 HOH B 1 501 17 HOH HOH . H 6 HOH B 2 502 91 HOH HOH . I 6 HOH C 1 101 37 HOH HOH . I 6 HOH C 2 102 28 HOH HOH . I 6 HOH C 3 103 58 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . F 5 7.448 70.082 40.851 1 91.24 ? C1 GOL 903 A 1 HETATM 2 O O1 GOL . . . F 5 6.315 70.6 41.543 1 90.14 ? O1 GOL 903 A 1 HETATM 3 C C2 GOL . . . F 5 8.01 71.089 39.869 1 93.12 ? C2 GOL 903 A 1 HETATM 4 O O2 GOL . . . F 5 7.027 71.377 38.875 1 87.5 ? O2 GOL 903 A 1 HETATM 5 C C3 GOL . . . F 5 9.294 70.626 39.209 1 95.89 ? C3 GOL 903 A 1 HETATM 6 O O3 GOL . . . F 5 10.092 71.721 38.763 1 93.87 ? O3 GOL 903 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 6 #