data_7CFO # _model_server_result.job_id Rqrp47Sa_c7F7fQpBck7TQ _model_server_result.datetime_utc '2024-10-25 12:23:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7cfo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":501}' # _entry.id 7CFO # _exptl.entry_id 7CFO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.31 _cell.angle_gamma 90 _cell.entry_id 7CFO _cell.length_a 50.757 _cell.length_b 99.432 _cell.length_c 93.598 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7CFO _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 50 A CYS 269 1_555 C SG CYS 50 C CYS 269 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf2 B SG CYS 50 B CYS 269 1_555 D SG CYS 50 D CYS 269 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 7CFO _atom_sites.fract_transf_matrix[1][1] 0.019702 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002877 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010057 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010797 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 WZ6 A 1 500 3 WZ6 WZ6 . F 2 WZ6 B 1 500 1 WZ6 WZ6 . G 3 GOL B 1 501 2 GOL GOL . H 2 WZ6 C 1 500 2 WZ6 WZ6 . I 3 GOL C 1 501 1 GOL GOL . J 4 HOH A 1 600 9 HOH HOH . J 4 HOH A 2 601 4 HOH HOH . J 4 HOH A 3 602 2 HOH HOH . J 4 HOH A 4 603 98 HOH HOH . J 4 HOH A 5 604 274 HOH HOH . J 4 HOH A 6 605 142 HOH HOH . J 4 HOH A 7 606 128 HOH HOH . J 4 HOH A 8 607 3 HOH HOH . J 4 HOH A 9 608 7 HOH HOH . J 4 HOH A 10 609 70 HOH HOH . J 4 HOH A 11 610 34 HOH HOH . J 4 HOH A 12 611 97 HOH HOH . J 4 HOH A 13 612 126 HOH HOH . J 4 HOH A 14 613 19 HOH HOH . J 4 HOH A 15 614 11 HOH HOH . J 4 HOH A 16 615 234 HOH HOH . J 4 HOH A 17 616 99 HOH HOH . J 4 HOH A 18 617 151 HOH HOH . J 4 HOH A 19 618 194 HOH HOH . J 4 HOH A 20 619 315 HOH HOH . J 4 HOH A 21 620 324 HOH HOH . K 4 HOH B 1 600 8 HOH HOH . K 4 HOH B 2 601 28 HOH HOH . K 4 HOH B 3 602 50 HOH HOH . K 4 HOH B 4 603 55 HOH HOH . K 4 HOH B 5 604 88 HOH HOH . K 4 HOH B 6 605 155 HOH HOH . K 4 HOH B 7 606 207 HOH HOH . K 4 HOH B 8 607 225 HOH HOH . K 4 HOH B 9 608 223 HOH HOH . K 4 HOH B 10 609 130 HOH HOH . K 4 HOH B 11 610 56 HOH HOH . K 4 HOH B 12 611 76 HOH HOH . K 4 HOH B 13 612 117 HOH HOH . K 4 HOH B 14 613 5 HOH HOH . K 4 HOH B 15 614 153 HOH HOH . K 4 HOH B 16 615 57 HOH HOH . K 4 HOH B 17 616 172 HOH HOH . K 4 HOH B 18 617 15 HOH HOH . K 4 HOH B 19 618 12 HOH HOH . K 4 HOH B 20 619 14 HOH HOH . K 4 HOH B 21 620 81 HOH HOH . K 4 HOH B 22 621 96 HOH HOH . K 4 HOH B 23 622 62 HOH HOH . K 4 HOH B 24 623 188 HOH HOH . K 4 HOH B 25 624 102 HOH HOH . K 4 HOH B 26 625 176 HOH HOH . K 4 HOH B 27 626 64 HOH HOH . K 4 HOH B 28 627 184 HOH HOH . K 4 HOH B 29 628 158 HOH HOH . K 4 HOH B 30 629 317 HOH HOH . K 4 HOH B 31 630 313 HOH HOH . L 4 HOH C 1 600 178 HOH HOH . L 4 HOH C 2 601 20 HOH HOH . L 4 HOH C 3 602 127 HOH HOH . L 4 HOH C 4 603 1 HOH HOH . L 4 HOH C 5 604 13 HOH HOH . L 4 HOH C 6 605 100 HOH HOH . L 4 HOH C 7 606 6 HOH HOH . L 4 HOH C 8 607 23 HOH HOH . L 4 HOH C 9 608 51 HOH HOH . L 4 HOH C 10 609 83 HOH HOH . L 4 HOH C 11 610 39 HOH HOH . L 4 HOH C 12 611 54 HOH HOH . L 4 HOH C 13 612 140 HOH HOH . L 4 HOH C 14 613 72 HOH HOH . L 4 HOH C 15 614 93 HOH HOH . L 4 HOH C 16 615 69 HOH HOH . L 4 HOH C 17 616 131 HOH HOH . L 4 HOH C 18 617 112 HOH HOH . L 4 HOH C 19 618 173 HOH HOH . L 4 HOH C 20 619 209 HOH HOH . L 4 HOH C 21 620 47 HOH HOH . L 4 HOH C 22 621 318 HOH HOH . L 4 HOH C 23 622 185 HOH HOH . L 4 HOH C 24 623 316 HOH HOH . M 4 HOH D 1 600 118 HOH HOH . M 4 HOH D 2 601 41 HOH HOH . M 4 HOH D 3 602 18 HOH HOH . M 4 HOH D 4 603 95 HOH HOH . M 4 HOH D 5 604 103 HOH HOH . M 4 HOH D 6 605 157 HOH HOH . M 4 HOH D 7 606 121 HOH HOH . M 4 HOH D 8 607 40 HOH HOH . M 4 HOH D 9 608 17 HOH HOH . M 4 HOH D 10 609 35 HOH HOH . M 4 HOH D 11 610 89 HOH HOH . M 4 HOH D 12 611 104 HOH HOH . M 4 HOH D 13 612 43 HOH HOH . M 4 HOH D 14 613 114 HOH HOH . M 4 HOH D 15 614 133 HOH HOH . M 4 HOH D 16 615 60 HOH HOH . M 4 HOH D 17 616 160 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . G 3 3.916 14.468 39.147 1 42.93 ? C1 GOL 501 B 1 HETATM 2 O O1 GOL . . . G 3 4.104 13.056 38.86 1 51.49 ? O1 GOL 501 B 1 HETATM 3 C C2 GOL . . . G 3 4.65 15.427 38.203 1 65.45 ? C2 GOL 501 B 1 HETATM 4 O O2 GOL . . . G 3 5.647 16.121 38.956 1 60.29 ? O2 GOL 501 B 1 HETATM 5 C C3 GOL . . . G 3 3.789 16.465 37.469 1 62.56 ? C3 GOL 501 B 1 HETATM 6 O O3 GOL . . . G 3 3.98 16.466 36.046 1 57.58 ? O3 GOL 501 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 6 #