data_7CFO
#
_model_server_result.job_id            REAFjBoCE7oXG_fiQeNJiA 
_model_server_result.datetime_utc      '2024-12-04 23:36:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7cfo 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":501}' 
#
_entry.id    7CFO 
#
_exptl.entry_id    7CFO 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          98.31 
_cell.angle_gamma         90 
_cell.entry_id            7CFO 
_cell.length_a            50.757 
_cell.length_b            99.432 
_cell.length_c            93.598 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7CFO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 G N N 
? 3 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 50 A CYS 269 1_555 C SG CYS 50 C CYS 269 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf2 B SG CYS 50 B CYS 269 1_555 D SG CYS 50 D CYS 269 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     7CFO 
_atom_sites.fract_transf_matrix[1][1]    0.019702 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002877 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010057 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010797 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 WZ6 A 1 500 3 WZ6 WZ6 . 
F 2 WZ6 B 1 500 1 WZ6 WZ6 . 
G 3 GOL B 1 501 2 GOL GOL . 
H 2 WZ6 C 1 500 2 WZ6 WZ6 . 
I 3 GOL C 1 501 1 GOL GOL . 
J 4 HOH A 1 600 9 HOH HOH . 
J 4 HOH A 2 601 4 HOH HOH . 
J 4 HOH A 3 602 2 HOH HOH . 
J 4 HOH A 4 603 98 HOH HOH . 
J 4 HOH A 5 604 274 HOH HOH . 
J 4 HOH A 6 605 142 HOH HOH . 
J 4 HOH A 7 606 128 HOH HOH . 
J 4 HOH A 8 607 3 HOH HOH . 
J 4 HOH A 9 608 7 HOH HOH . 
J 4 HOH A 10 609 70 HOH HOH . 
J 4 HOH A 11 610 34 HOH HOH . 
J 4 HOH A 12 611 97 HOH HOH . 
J 4 HOH A 13 612 126 HOH HOH . 
J 4 HOH A 14 613 19 HOH HOH . 
J 4 HOH A 15 614 11 HOH HOH . 
J 4 HOH A 16 615 234 HOH HOH . 
J 4 HOH A 17 616 99 HOH HOH . 
J 4 HOH A 18 617 151 HOH HOH . 
J 4 HOH A 19 618 194 HOH HOH . 
J 4 HOH A 20 619 315 HOH HOH . 
J 4 HOH A 21 620 324 HOH HOH . 
K 4 HOH B 1 600 8 HOH HOH . 
K 4 HOH B 2 601 28 HOH HOH . 
K 4 HOH B 3 602 50 HOH HOH . 
K 4 HOH B 4 603 55 HOH HOH . 
K 4 HOH B 5 604 88 HOH HOH . 
K 4 HOH B 6 605 155 HOH HOH . 
K 4 HOH B 7 606 207 HOH HOH . 
K 4 HOH B 8 607 225 HOH HOH . 
K 4 HOH B 9 608 223 HOH HOH . 
K 4 HOH B 10 609 130 HOH HOH . 
K 4 HOH B 11 610 56 HOH HOH . 
K 4 HOH B 12 611 76 HOH HOH . 
K 4 HOH B 13 612 117 HOH HOH . 
K 4 HOH B 14 613 5 HOH HOH . 
K 4 HOH B 15 614 153 HOH HOH . 
K 4 HOH B 16 615 57 HOH HOH . 
K 4 HOH B 17 616 172 HOH HOH . 
K 4 HOH B 18 617 15 HOH HOH . 
K 4 HOH B 19 618 12 HOH HOH . 
K 4 HOH B 20 619 14 HOH HOH . 
K 4 HOH B 21 620 81 HOH HOH . 
K 4 HOH B 22 621 96 HOH HOH . 
K 4 HOH B 23 622 62 HOH HOH . 
K 4 HOH B 24 623 188 HOH HOH . 
K 4 HOH B 25 624 102 HOH HOH . 
K 4 HOH B 26 625 176 HOH HOH . 
K 4 HOH B 27 626 64 HOH HOH . 
K 4 HOH B 28 627 184 HOH HOH . 
K 4 HOH B 29 628 158 HOH HOH . 
K 4 HOH B 30 629 317 HOH HOH . 
K 4 HOH B 31 630 313 HOH HOH . 
L 4 HOH C 1 600 178 HOH HOH . 
L 4 HOH C 2 601 20 HOH HOH . 
L 4 HOH C 3 602 127 HOH HOH . 
L 4 HOH C 4 603 1 HOH HOH . 
L 4 HOH C 5 604 13 HOH HOH . 
L 4 HOH C 6 605 100 HOH HOH . 
L 4 HOH C 7 606 6 HOH HOH . 
L 4 HOH C 8 607 23 HOH HOH . 
L 4 HOH C 9 608 51 HOH HOH . 
L 4 HOH C 10 609 83 HOH HOH . 
L 4 HOH C 11 610 39 HOH HOH . 
L 4 HOH C 12 611 54 HOH HOH . 
L 4 HOH C 13 612 140 HOH HOH . 
L 4 HOH C 14 613 72 HOH HOH . 
L 4 HOH C 15 614 93 HOH HOH . 
L 4 HOH C 16 615 69 HOH HOH . 
L 4 HOH C 17 616 131 HOH HOH . 
L 4 HOH C 18 617 112 HOH HOH . 
L 4 HOH C 19 618 173 HOH HOH . 
L 4 HOH C 20 619 209 HOH HOH . 
L 4 HOH C 21 620 47 HOH HOH . 
L 4 HOH C 22 621 318 HOH HOH . 
L 4 HOH C 23 622 185 HOH HOH . 
L 4 HOH C 24 623 316 HOH HOH . 
M 4 HOH D 1 600 118 HOH HOH . 
M 4 HOH D 2 601 41 HOH HOH . 
M 4 HOH D 3 602 18 HOH HOH . 
M 4 HOH D 4 603 95 HOH HOH . 
M 4 HOH D 5 604 103 HOH HOH . 
M 4 HOH D 6 605 157 HOH HOH . 
M 4 HOH D 7 606 121 HOH HOH . 
M 4 HOH D 8 607 40 HOH HOH . 
M 4 HOH D 9 608 17 HOH HOH . 
M 4 HOH D 10 609 35 HOH HOH . 
M 4 HOH D 11 610 89 HOH HOH . 
M 4 HOH D 12 611 104 HOH HOH . 
M 4 HOH D 13 612 43 HOH HOH . 
M 4 HOH D 14 613 114 HOH HOH . 
M 4 HOH D 15 614 133 HOH HOH . 
M 4 HOH D 16 615 60 HOH HOH . 
M 4 HOH D 17 616 160 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . G 3 3.916 14.468 39.147 1 42.93 ? C1 GOL 501 B 1 
HETATM 2 O O1 GOL . . . G 3 4.104 13.056 38.86 1 51.49 ? O1 GOL 501 B 1 
HETATM 3 C C2 GOL . . . G 3 4.65 15.427 38.203 1 65.45 ? C2 GOL 501 B 1 
HETATM 4 O O2 GOL . . . G 3 5.647 16.121 38.956 1 60.29 ? O2 GOL 501 B 1 
HETATM 5 C C3 GOL . . . G 3 3.789 16.465 37.469 1 62.56 ? C3 GOL 501 B 1 
HETATM 6 O O3 GOL . . . G 3 3.98 16.466 36.046 1 57.58 ? O3 GOL 501 B 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           267 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           6 
#