data_7CFS
#
_model_server_result.job_id            Wx2IfpvyjTe2XGsiXmbT8w 
_model_server_result.datetime_utc      '2024-11-23 09:46:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7cfs 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":603}' 
#
_entry.id    7CFS 
#
_exptl.entry_id    7CFS 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              486.726 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CHOLESTEROL HEMISUCCINATE' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7CFS 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7CFS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 J N N 
? 3 M N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 102 A CYS 93 1_555 A SG CYS 203 A CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf2 A SG CYS 181 A CYS 172 1_555 A SG CYS 188 A CYS 179 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf3 A SG CYS 299 A CYS 290 1_555 A SG CYS 376 A CYS 367 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf4 A SG CYS 319 A CYS 310 1_555 A SG CYS 372 A CYS 363 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf5 A SG CYS 323 A CYS 314 1_555 A SG CYS 370 A CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? 
disulf ? disulf6 A SG CYS 332 A CYS 323 1_555 A SG CYS 354 A CYS 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf7 A SG CYS 334 A CYS 325 1_555 A SG CYS 346 A CYS 337 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf8 B SG CYS 102 B CYS 93 1_555 B SG CYS 203 B CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf9 B SG CYS 181 B CYS 172 1_555 B SG CYS 188 B CYS 179 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf10 B SG CYS 299 B CYS 290 1_555 B SG CYS 376 B CYS 367 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf11 B SG CYS 319 B CYS 310 1_555 B SG CYS 372 B CYS 363 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf12 B SG CYS 323 B CYS 314 1_555 B SG CYS 370 B CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? 
disulf ? disulf13 B SG CYS 332 B CYS 323 1_555 B SG CYS 354 B CYS 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf14 B SG CYS 334 B CYS 325 1_555 B SG CYS 346 B CYS 337 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf15 C SG CYS 102 C CYS 93 1_555 C SG CYS 203 C CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf16 C SG CYS 181 C CYS 172 1_555 C SG CYS 188 C CYS 179 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf17 C SG CYS 299 C CYS 290 1_555 C SG CYS 376 C CYS 367 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf18 C SG CYS 319 C CYS 310 1_555 C SG CYS 372 C CYS 363 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf19 C SG CYS 323 C CYS 314 1_555 C SG CYS 370 C CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? 
disulf ? disulf20 C SG CYS 332 C CYS 323 1_555 C SG CYS 354 C CYS 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf21 C SG CYS 334 C CYS 325 1_555 C SG CYS 346 C CYS 337 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
covale ? covale1 A ND2 ASN 377 A ASN 368 1_555 E C1 NAG . A NAG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? 
covale ? covale2 A ND2 ASN 404 A ASN 395 1_555 D C1 NAG . A NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? 
covale ? covale3 B ND2 ASN 377 B ASN 368 1_555 I C1 NAG . B NAG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? 
covale ? covale4 B ND2 ASN 404 B ASN 395 1_555 H C1 NAG . B NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.437 ? 
covale ? covale5 C ND2 ASN 377 C ASN 368 1_555 L C1 NAG . C NAG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? 
covale ? covale6 C ND2 ASN 404 C ASN 395 1_555 K C1 NAG . C NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? 
metalc ? metalc1 A OD1 ASP 443 A ASP 434 1_555 G NA NA . A NA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? 
metalc ? metalc2 A OD2 ASP 443 A ASP 434 1_555 G NA NA . A NA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.786 ? 
metalc ? metalc3 G NA NA . A NA 604 1_555 B OD1 ASP 443 B ASP 434 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? 
metalc ? metalc4 G NA NA . A NA 604 1_555 B OD2 ASP 443 B ASP 434 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.807 ? 
metalc ? metalc5 G NA NA . A NA 604 1_555 C OD1 ASP 443 C ASP 434 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? 
metalc ? metalc6 G NA NA . A NA 604 1_555 C OD2 ASP 443 C ASP 434 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.822 ? 
#
_chem_comp.formula           'C31 H50 O4' 
_chem_comp.formula_weight    486.726 
_chem_comp.id                Y01 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CHOLESTEROL HEMISUCCINATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAA CBA Y01 sing 404 n n 
CBA CAB Y01 sing 405 n n 
CBA CAN Y01 sing 406 n n 
CAN CAJ Y01 sing 407 n n 
CAJ CAO Y01 sing 408 n n 
CAO CBB Y01 sing 409 n n 
CBB CAC Y01 sing 410 n n 
CBB CBE Y01 sing 411 n n 
CBE CAP Y01 sing 412 n n 
CBE CBI Y01 sing 413 n n 
CAP CAQ Y01 sing 414 n n 
CAQ CBG Y01 sing 415 n n 
CBG CBI Y01 sing 416 n n 
CBG CBD Y01 sing 417 n n 
CBI CAE Y01 sing 418 n n 
CBI CAU Y01 sing 419 n n 
CAU CAS Y01 sing 420 n n 
CAS CBF Y01 sing 421 n n 
CBF CBD Y01 sing 422 n n 
CBF CBH Y01 sing 423 n n 
CBD CAK Y01 sing 424 n n 
CAK CAI Y01 sing 425 n n 
CAI CAZ Y01 doub 426 n n 
CAZ CAV Y01 sing 427 n n 
CAZ CBH Y01 sing 428 n n 
CAV CBC Y01 sing 429 n n 
CBH CAD Y01 sing 430 n n 
CBH CAT Y01 sing 431 n n 
CAT CAR Y01 sing 432 n n 
CAR CBC Y01 sing 433 n n 
CBC OAW Y01 sing 434 n n 
OAW CAY Y01 sing 435 n n 
CAY OAG Y01 doub 436 n n 
CAY CAM Y01 sing 437 n n 
CAM CAL Y01 sing 438 n n 
CAL CAX Y01 sing 439 n n 
CAX OAH Y01 sing 440 n n 
CAX OAF Y01 doub 441 n n 
CAA HAA1 Y01 sing 442 n n 
CAA HAA2 Y01 sing 443 n n 
CAA HAA3 Y01 sing 444 n n 
CBA HBA Y01 sing 445 n n 
CAB HAB1 Y01 sing 446 n n 
CAB HAB2 Y01 sing 447 n n 
CAB HAB3 Y01 sing 448 n n 
CAN HAN1 Y01 sing 449 n n 
CAN HAN2 Y01 sing 450 n n 
CAJ HAJ1 Y01 sing 451 n n 
CAJ HAJ2 Y01 sing 452 n n 
CAO HAO1 Y01 sing 453 n n 
CAO HAO2 Y01 sing 454 n n 
CBB HBB Y01 sing 455 n n 
CAC HAC1 Y01 sing 456 n n 
CAC HAC2 Y01 sing 457 n n 
CAC HAC3 Y01 sing 458 n n 
CBE HBE Y01 sing 459 n n 
CAP HAP1 Y01 sing 460 n n 
CAP HAP2 Y01 sing 461 n n 
CAQ HAQ1 Y01 sing 462 n n 
CAQ HAQ2 Y01 sing 463 n n 
CBG HBG Y01 sing 464 n n 
CBD HBD Y01 sing 465 n n 
CAE HAE1 Y01 sing 466 n n 
CAE HAE2 Y01 sing 467 n n 
CAE HAE3 Y01 sing 468 n n 
CAU HAU1 Y01 sing 469 n n 
CAU HAU2 Y01 sing 470 n n 
CAS HAS1 Y01 sing 471 n n 
CAS HAS2 Y01 sing 472 n n 
CBF HBF Y01 sing 473 n n 
CAK HAK1 Y01 sing 474 n n 
CAK HAK2 Y01 sing 475 n n 
CAI HAI Y01 sing 476 n n 
CAV HAV1 Y01 sing 477 n n 
CAV HAV2 Y01 sing 478 n n 
CBC HBC Y01 sing 479 n n 
CAD HAD1 Y01 sing 480 n n 
CAD HAD2 Y01 sing 481 n n 
CAD HAD3 Y01 sing 482 n n 
CAT HAT1 Y01 sing 483 n n 
CAT HAT2 Y01 sing 484 n n 
CAR HAR1 Y01 sing 485 n n 
CAR HAR2 Y01 sing 486 n n 
CAM HAM1 Y01 sing 487 n n 
CAM HAM2 Y01 sing 488 n n 
CAL HAL1 Y01 sing 489 n n 
CAL HAL2 Y01 sing 490 n n 
OAH HAH Y01 sing 491 n n 
#
_atom_sites.entry_id                     7CFS 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 NAG A 1 601 601 NAG NAG . 
E 2 NAG A 1 602 602 NAG NAG . 
F 3 Y01 A 1 603 603 Y01 Y01 . 
G 4 NA A 1 604 604 NA NA . 
H 2 NAG B 1 601 601 NAG NAG . 
I 2 NAG B 1 602 602 NAG NAG . 
J 3 Y01 B 1 603 603 Y01 Y01 . 
K 2 NAG C 1 601 601 NAG NAG . 
L 2 NAG C 1 602 602 NAG NAG . 
M 3 Y01 C 1 603 603 Y01 Y01 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAA Y01 . . . M 3 92.93 109.367 71.727 1 45.55 ? CAA Y01 603 C 1 
HETATM 2 C CBA Y01 . . . M 3 91.603 110.118 71.93 1 44.09 ? CBA Y01 603 C 1 
HETATM 3 C CAB Y01 . . . M 3 91.357 111.154 70.814 1 46.32 ? CAB Y01 603 C 1 
HETATM 4 C CAN Y01 . . . M 3 91.468 110.765 73.325 1 43.39 ? CAN Y01 603 C 1 
HETATM 5 C CAJ Y01 . . . M 3 92.739 110.72 74.209 1 38.06 ? CAJ Y01 603 C 1 
HETATM 6 C CAO Y01 . . . M 3 92.869 112.009 75.025 1 30 ? CAO Y01 603 C 1 
HETATM 7 C CBB Y01 . . . M 3 93.826 111.863 76.206 1 31.43 ? CBB Y01 603 C 1 
HETATM 8 C CAC Y01 . . . M 3 95.271 112.163 75.751 1 35.86 ? CAC Y01 603 C 1 
HETATM 9 C CBE Y01 . . . M 3 93.318 112.728 77.401 1 31.16 ? CBE Y01 603 C 1 
HETATM 10 C CAP Y01 . . . M 3 92.056 112.059 77.991 1 31.72 ? CAP Y01 603 C 1 
HETATM 11 C CAQ Y01 . . . M 3 92.139 112.298 79.504 1 30.79 ? CAQ Y01 603 C 1 
HETATM 12 C CBG Y01 . . . M 3 93.133 113.445 79.593 1 27.87 ? CBG Y01 603 C 1 
HETATM 13 C CBI Y01 . . . M 3 94.228 112.935 78.661 1 32.34 ? CBI Y01 603 C 1 
HETATM 14 C CAE Y01 . . . M 3 94.903 111.63 79.175 1 31.91 ? CAE Y01 603 C 1 
HETATM 15 C CAU Y01 . . . M 3 95.274 114.071 78.525 1 34.11 ? CAU Y01 603 C 1 
HETATM 16 C CAS Y01 . . . M 3 95.82 114.566 79.901 1 35 ? CAS Y01 603 C 1 
HETATM 17 C CBF Y01 . . . M 3 94.707 114.902 80.945 1 33.09 ? CBF Y01 603 C 1 
HETATM 18 C CBD Y01 . . . M 3 93.647 113.78 81.003 1 29.25 ? CBD Y01 603 C 1 
HETATM 19 C CAK Y01 . . . M 3 92.477 114.14 81.917 1 32.64 ? CAK Y01 603 C 1 
HETATM 20 C CAI Y01 . . . M 3 92.846 114.784 83.088 1 31.15 ? CAI Y01 603 C 1 
HETATM 21 C CAZ Y01 . . . M 3 94.081 115.327 83.379 1 34.62 ? CAZ Y01 603 C 1 
HETATM 22 C CAV Y01 . . . M 3 94.209 116.008 84.741 1 39.32 ? CAV Y01 603 C 1 
HETATM 23 C CBH Y01 . . . M 3 95.255 115.256 82.362 1 35.33 ? CBH Y01 603 C 1 
HETATM 24 C CAD Y01 . . . M 3 96.263 114.206 82.863 1 34.48 ? CAD Y01 603 C 1 
HETATM 25 C CAT Y01 . . . M 3 95.94 116.646 82.33 1 40.87 ? CAT Y01 603 C 1 
HETATM 26 C CAR Y01 . . . M 3 96.275 117.19 83.739 1 45.09 ? CAR Y01 603 C 1 
HETATM 27 C CBC Y01 . . . M 3 95.007 117.302 84.64 1 49.17 ? CBC Y01 603 C 1 
HETATM 28 O OAW Y01 . . . M 3 95.262 117.576 86.026 1 62.43 ? OAW Y01 603 C 1 
HETATM 29 C CAY Y01 . . . M 3 96.046 118.667 86.273 1 72.8 ? CAY Y01 603 C 1 
HETATM 30 O OAG Y01 . . . M 3 97.109 118.496 86.885 1 77.42 ? OAG Y01 603 C 1 
HETATM 31 C CAM Y01 . . . M 3 95.598 120.069 85.798 1 76.2 ? CAM Y01 603 C 1 
HETATM 32 C CAL Y01 . . . M 3 95.355 121.035 86.963 1 80.37 ? CAL Y01 603 C 1 
HETATM 33 C CAX Y01 . . . M 3 96.663 121.385 87.684 1 84.27 ? CAX Y01 603 C 1 
HETATM 34 O OAH Y01 . . . M 3 97.599 121.844 86.983 1 86.59 ? OAH Y01 603 C 1 
HETATM 35 O OAF Y01 . . . M 3 96.701 121.168 88.919 1 85.38 ? OAF Y01 603 C 1 
#
_model_server_stats.io_time_ms              71 
_model_server_stats.parse_time_ms           27 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           269 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           35 
#