data_7CGC # _model_server_result.job_id eN5A8Vbxj_yc9NxeZo5JMg _model_server_result.datetime_utc '2024-10-10 02:24:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7cgc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":401}' # _entry.id 7CGC # _exptl.entry_id 7CGC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 107.868 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SILVER ION' _entity.pdbx_number_of_molecules 16 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.1 _cell.angle_gamma 90 _cell.entry_id 7CGC _cell.length_a 58.222 _cell.length_b 125.129 _cell.length_c 85.195 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7CGC _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,G,H,U 1 1 B,I,J,K,L,V 2 1 C,M,N,O,P,W 3 1 D,Q,R,S,T,X 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N ? 2 Q N N ? 2 R N N ? 2 S N N ? 2 T N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 113 A CYS 113 1_555 E AG AG . A AG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.766 ? metalc ? metalc2 A SG CYS 113 A CYS 113 1_555 F AG AG . A AG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.497 ? metalc ? metalc3 A NZ LYS 142 A LYS 142 1_555 F AG AG . A AG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc4 A N VAL 173 A VAL 173 1_555 G AG AG . A AG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? metalc ? metalc5 A O VAL 173 A VAL 173 1_555 G AG AG . A AG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.672 ? metalc ? metalc6 A SG CYS 251 A CYS 251 1_555 G AG AG . A AG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc7 A SG CYS 251 A CYS 251 1_555 H AG AG . A AG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.791 ? metalc ? metalc8 B SG CYS 113 B CYS 113 1_555 J AG AG . B AG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? metalc ? metalc9 B N VAL 173 B VAL 173 1_555 K AG AG . B AG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? metalc ? metalc10 B O VAL 173 B VAL 173 1_555 K AG AG . B AG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.463 ? metalc ? metalc11 B SG CYS 251 B CYS 251 1_555 K AG AG . B AG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? metalc ? metalc12 B SG CYS 251 B CYS 251 1_555 L AG AG . B AG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc13 C SG CYS 113 C CYS 113 1_555 M AG AG . C AG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? metalc ? metalc14 C SG CYS 113 C CYS 113 1_555 N AG AG . C AG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.483 ? metalc ? metalc15 C NZ LYS 142 C LYS 142 1_555 M AG AG . C AG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? metalc ? metalc16 C N VAL 173 C VAL 173 1_555 P AG AG . C AG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.214 ? metalc ? metalc17 C SG CYS 251 C CYS 251 1_555 O AG AG . C AG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc18 C SG CYS 251 C CYS 251 1_555 P AG AG . C AG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.219 ? metalc ? metalc19 D SG CYS 113 D CYS 113 1_555 Q AG AG . D AG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.954 ? metalc ? metalc20 D SG CYS 113 D CYS 113 1_555 R AG AG . D AG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.579 ? metalc ? metalc21 D N VAL 173 D VAL 173 1_555 T AG AG . D AG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc22 D O VAL 173 D VAL 173 1_555 T AG AG . D AG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.525 ? metalc ? metalc23 D SG CYS 251 D CYS 251 1_555 S AG AG . D AG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc24 D SG CYS 251 D CYS 251 1_555 T AG AG . D AG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.274 ? metalc ? metalc25 Q AG AG . D AG 401 1_555 X O HOH . D HOH 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.486 ? # _chem_comp.formula 'Ag 1' _chem_comp.formula_weight 107.868 _chem_comp.id AG _chem_comp.mon_nstd_flag . _chem_comp.name 'SILVER ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7CGC _atom_sites.fract_transf_matrix[1][1] 0.017176 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005285 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007992 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012281 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 AG A 1 401 401 AG AG . F 2 AG A 1 402 402 AG AG . G 2 AG A 1 403 403 AG AG . H 2 AG A 1 404 404 AG AG . I 2 AG B 1 401 401 AG AG . J 2 AG B 1 402 402 AG AG . K 2 AG B 1 403 403 AG AG . L 2 AG B 1 404 404 AG AG . M 2 AG C 1 401 401 AG AG . N 2 AG C 1 402 402 AG AG . O 2 AG C 1 403 403 AG AG . P 2 AG C 1 404 404 AG AG . Q 2 AG D 1 401 401 AG AG . R 2 AG D 1 402 402 AG AG . S 2 AG D 1 403 403 AG AG . T 2 AG D 1 404 404 AG AG . U 3 HOH A 1 501 501 HOH HOH . U 3 HOH A 2 502 502 HOH HOH . U 3 HOH A 3 503 503 HOH HOH . U 3 HOH A 4 504 504 HOH HOH . V 3 HOH B 1 501 501 HOH HOH . V 3 HOH B 2 502 502 HOH HOH . V 3 HOH B 3 503 503 HOH HOH . V 3 HOH B 4 504 504 HOH HOH . W 3 HOH C 1 501 501 HOH HOH . W 3 HOH C 2 502 502 HOH HOH . W 3 HOH C 3 503 503 HOH HOH . X 3 HOH D 1 501 501 HOH HOH . X 3 HOH D 2 502 502 HOH HOH . X 3 HOH D 3 503 503 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol AG _atom_site.label_atom_id AG _atom_site.label_comp_id AG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 2 _atom_site.Cartn_x -32.968 _atom_site.Cartn_y -22.402 _atom_site.Cartn_z 77.257 _atom_site.occupancy 0.79 _atom_site.B_iso_or_equiv 47.16 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id AG _atom_site.auth_comp_id AG _atom_site.auth_seq_id 401 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #