data_7CH9
#
_model_server_result.job_id            U7UCDYuiFC0Uc0e5k6qr3A 
_model_server_result.datetime_utc      '2024-12-03 18:42:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7ch9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"N","auth_seq_id":201}' 
#
_entry.id    7CH9 
#
_exptl.entry_id    7CH9 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              648.891 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '2-(HEXADECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL HEXADECANOATE' 
_entity.pdbx_number_of_molecules    10 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7CH9 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7CH9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dodecameric 
_pdbx_struct_assembly.oligomeric_count      12 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 M N N 
? 5 N N N 
? 5 O N N 
? 5 P N N 
? 5 Q N N 
? 5 R N N 
? 5 S N N 
? 5 T N N 
? 5 U N N 
? 5 V N N 
#
_chem_comp.formula           'C35 H69 O8 P' 
_chem_comp.formula_weight    648.891 
_chem_comp.id                LPP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '2-(HEXADECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL HEXADECANOATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     '1,2-DIPALMITOYL-SN-GLYCERO-3-PHOSPHATE;L-B,G-DIPALMITOYL-A-PHOSPHATIDIC ACID DISODIUM SALT;3-SN-PHOSPHATIDIC ACID;1,2-DIPALMITOYLDISODIUM SALT' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P1 O2 LPP sing 192 n n 
P1 O3 LPP doub 193 n n 
P1 O4 LPP sing 194 n n 
P1 O5 LPP sing 195 n n 
O2 HO2 LPP sing 196 n n 
O4 HO4 LPP sing 197 n n 
O5 C6 LPP sing 198 n n 
C6 C7 LPP sing 199 n n 
C6 HC61 LPP sing 200 n n 
C6 HC62 LPP sing 201 n n 
C7 C8 LPP sing 202 n n 
C7 O9 LPP sing 203 n n 
C7 HC7 LPP sing 204 n n 
C8 O27 LPP sing 205 n n 
C8 HC81 LPP sing 206 n n 
C8 HC82 LPP sing 207 n n 
O9 C11 LPP sing 208 n n 
O27 C29 LPP sing 209 n n 
C11 O10 LPP doub 210 n n 
C11 C12 LPP sing 211 n n 
C12 C13 LPP sing 212 n n 
C12 H121 LPP sing 213 n n 
C12 H122 LPP sing 214 n n 
C13 C14 LPP sing 215 n n 
C13 H131 LPP sing 216 n n 
C13 H132 LPP sing 217 n n 
C14 C15 LPP sing 218 n n 
C14 H141 LPP sing 219 n n 
C14 H142 LPP sing 220 n n 
C15 C16 LPP sing 221 n n 
C15 H151 LPP sing 222 n n 
C15 H152 LPP sing 223 n n 
C16 C17 LPP sing 224 n n 
C16 H161 LPP sing 225 n n 
C16 H162 LPP sing 226 n n 
C17 C18 LPP sing 227 n n 
C17 H171 LPP sing 228 n n 
C17 H172 LPP sing 229 n n 
C18 C19 LPP sing 230 n n 
C18 H181 LPP sing 231 n n 
C18 H182 LPP sing 232 n n 
C19 C20 LPP sing 233 n n 
C19 H191 LPP sing 234 n n 
C19 H192 LPP sing 235 n n 
C20 C21 LPP sing 236 n n 
C20 H201 LPP sing 237 n n 
C20 H202 LPP sing 238 n n 
C21 C22 LPP sing 239 n n 
C21 H211 LPP sing 240 n n 
C21 H212 LPP sing 241 n n 
C22 C23 LPP sing 242 n n 
C22 H221 LPP sing 243 n n 
C22 H222 LPP sing 244 n n 
C23 C24 LPP sing 245 n n 
C23 H231 LPP sing 246 n n 
C23 H232 LPP sing 247 n n 
C24 C25 LPP sing 248 n n 
C24 H241 LPP sing 249 n n 
C24 H242 LPP sing 250 n n 
C25 C26 LPP sing 251 n n 
C25 H251 LPP sing 252 n n 
C25 H252 LPP sing 253 n n 
C26 H261 LPP sing 254 n n 
C26 H262 LPP sing 255 n n 
C26 H263 LPP sing 256 n n 
C29 O28 LPP doub 257 n n 
C29 C30 LPP sing 258 n n 
C30 C31 LPP sing 259 n n 
C30 H301 LPP sing 260 n n 
C30 H302 LPP sing 261 n n 
C31 C32 LPP sing 262 n n 
C31 H311 LPP sing 263 n n 
C31 H312 LPP sing 264 n n 
C32 C33 LPP sing 265 n n 
C32 H321 LPP sing 266 n n 
C32 H322 LPP sing 267 n n 
C33 C34 LPP sing 268 n n 
C33 H331 LPP sing 269 n n 
C33 H332 LPP sing 270 n n 
C34 C35 LPP sing 271 n n 
C34 H341 LPP sing 272 n n 
C34 H342 LPP sing 273 n n 
C35 C36 LPP sing 274 n n 
C35 H351 LPP sing 275 n n 
C35 H352 LPP sing 276 n n 
C36 C37 LPP sing 277 n n 
C36 H361 LPP sing 278 n n 
C36 H362 LPP sing 279 n n 
C37 C38 LPP sing 280 n n 
C37 H371 LPP sing 281 n n 
C37 H372 LPP sing 282 n n 
C38 C39 LPP sing 283 n n 
C38 H381 LPP sing 284 n n 
C38 H382 LPP sing 285 n n 
C39 C40 LPP sing 286 n n 
C39 H391 LPP sing 287 n n 
C39 H392 LPP sing 288 n n 
C40 C41 LPP sing 289 n n 
C40 H401 LPP sing 290 n n 
C40 H402 LPP sing 291 n n 
C41 C42 LPP sing 292 n n 
C41 H411 LPP sing 293 n n 
C41 H412 LPP sing 294 n n 
C42 C43 LPP sing 295 n n 
C42 H421 LPP sing 296 n n 
C42 H422 LPP sing 297 n n 
C43 C44 LPP sing 298 n n 
C43 H431 LPP sing 299 n n 
C43 H432 LPP sing 300 n n 
C44 H441 LPP sing 301 n n 
C44 H442 LPP sing 302 n n 
C44 H443 LPP sing 303 n n 
#
_atom_sites.entry_id                     7CH9 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
M 5 LPP A 1 301 301 LPP PEF . 
N 5 LPP B 1 201 201 LPP PEF . 
O 5 LPP B 1 202 301 LPP PEF . 
P 5 LPP C 1 201 201 LPP PEF . 
Q 5 LPP C 1 202 201 LPP PEF . 
R 5 LPP E 1 201 201 LPP PEF . 
S 5 LPP F 1 201 201 LPP PEF . 
T 5 LPP G 1 301 4 LPP PEF . 
U 5 LPP G 1 302 5 LPP PEF . 
V 5 LPP H 1 301 1 LPP PEF . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C31 LPP . . . N 5 125.154 122.008 177.95 1 123.6 ? C31 LPP 201 B 1 
HETATM 2 C C32 LPP . . . N 5 125.162 121.76 176.443 1 123.6 ? C32 LPP 201 B 1 
HETATM 3 C C33 LPP . . . N 5 124.874 120.3 176.101 1 123.6 ? C33 LPP 201 B 1 
HETATM 4 C C34 LPP . . . N 5 126.073 119.61 175.456 1 123.6 ? C34 LPP 201 B 1 
HETATM 5 C C35 LPP . . . N 5 126.728 120.464 174.372 1 123.6 ? C35 LPP 201 B 1 
HETATM 6 C C36 LPP . . . N 5 127.025 119.654 173.114 1 123.6 ? C36 LPP 201 B 1 
HETATM 7 C C37 LPP . . . N 5 127.094 120.525 171.863 1 123.6 ? C37 LPP 201 B 1 
HETATM 8 C C38 LPP . . . N 5 128.493 120.514 171.256 1 123.6 ? C38 LPP 201 B 1 
HETATM 9 C C39 LPP . . . N 5 128.512 121.011 169.814 1 123.6 ? C39 LPP 201 B 1 
HETATM 10 C C40 LPP . . . N 5 127.635 120.171 168.892 1 123.6 ? C40 LPP 201 B 1 
HETATM 11 C C41 LPP . . . N 5 127.917 120.468 167.422 1 123.6 ? C41 LPP 201 B 1 
HETATM 12 C C42 LPP . . . N 5 128.039 119.2 166.58 1 123.6 ? C42 LPP 201 B 1 
HETATM 13 C C43 LPP . . . N 5 128.61 118.022 167.364 1 123.6 ? C43 LPP 201 B 1 
#
_model_server_stats.io_time_ms              65 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    37 
_model_server_stats.query_time_ms           286 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           13 
#