data_7CH9 # _model_server_result.job_id 46erI06ugUJoFZG9dVuquQ _model_server_result.datetime_utc '2024-11-04 22:34:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ch9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"U","auth_seq_id":302}' # _entry.id 7CH9 # _exptl.entry_id 7CH9 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 648.891 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(HEXADECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL HEXADECANOATE' _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7CH9 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7CH9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 M N N ? 5 N N N ? 5 O N N ? 5 P N N ? 5 Q N N ? 5 R N N ? 5 S N N ? 5 T N N ? 5 U N N ? 5 V N N # _chem_comp.formula 'C35 H69 O8 P' _chem_comp.formula_weight 648.891 _chem_comp.id LPP _chem_comp.mon_nstd_flag . _chem_comp.name '2-(HEXADECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL HEXADECANOATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '1,2-DIPALMITOYL-SN-GLYCERO-3-PHOSPHATE;L-B,G-DIPALMITOYL-A-PHOSPHATIDIC ACID DISODIUM SALT;3-SN-PHOSPHATIDIC ACID;1,2-DIPALMITOYLDISODIUM SALT' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P1 O2 LPP sing 192 n n P1 O3 LPP doub 193 n n P1 O4 LPP sing 194 n n P1 O5 LPP sing 195 n n O2 HO2 LPP sing 196 n n O4 HO4 LPP sing 197 n n O5 C6 LPP sing 198 n n C6 C7 LPP sing 199 n n C6 HC61 LPP sing 200 n n C6 HC62 LPP sing 201 n n C7 C8 LPP sing 202 n n C7 O9 LPP sing 203 n n C7 HC7 LPP sing 204 n n C8 O27 LPP sing 205 n n C8 HC81 LPP sing 206 n n C8 HC82 LPP sing 207 n n O9 C11 LPP sing 208 n n O27 C29 LPP sing 209 n n C11 O10 LPP doub 210 n n C11 C12 LPP sing 211 n n C12 C13 LPP sing 212 n n C12 H121 LPP sing 213 n n C12 H122 LPP sing 214 n n C13 C14 LPP sing 215 n n C13 H131 LPP sing 216 n n C13 H132 LPP sing 217 n n C14 C15 LPP sing 218 n n C14 H141 LPP sing 219 n n C14 H142 LPP sing 220 n n C15 C16 LPP sing 221 n n C15 H151 LPP sing 222 n n C15 H152 LPP sing 223 n n C16 C17 LPP sing 224 n n C16 H161 LPP sing 225 n n C16 H162 LPP sing 226 n n C17 C18 LPP sing 227 n n C17 H171 LPP sing 228 n n C17 H172 LPP sing 229 n n C18 C19 LPP sing 230 n n C18 H181 LPP sing 231 n n C18 H182 LPP sing 232 n n C19 C20 LPP sing 233 n n C19 H191 LPP sing 234 n n C19 H192 LPP sing 235 n n C20 C21 LPP sing 236 n n C20 H201 LPP sing 237 n n C20 H202 LPP sing 238 n n C21 C22 LPP sing 239 n n C21 H211 LPP sing 240 n n C21 H212 LPP sing 241 n n C22 C23 LPP sing 242 n n C22 H221 LPP sing 243 n n C22 H222 LPP sing 244 n n C23 C24 LPP sing 245 n n C23 H231 LPP sing 246 n n C23 H232 LPP sing 247 n n C24 C25 LPP sing 248 n n C24 H241 LPP sing 249 n n C24 H242 LPP sing 250 n n C25 C26 LPP sing 251 n n C25 H251 LPP sing 252 n n C25 H252 LPP sing 253 n n C26 H261 LPP sing 254 n n C26 H262 LPP sing 255 n n C26 H263 LPP sing 256 n n C29 O28 LPP doub 257 n n C29 C30 LPP sing 258 n n C30 C31 LPP sing 259 n n C30 H301 LPP sing 260 n n C30 H302 LPP sing 261 n n C31 C32 LPP sing 262 n n C31 H311 LPP sing 263 n n C31 H312 LPP sing 264 n n C32 C33 LPP sing 265 n n C32 H321 LPP sing 266 n n C32 H322 LPP sing 267 n n C33 C34 LPP sing 268 n n C33 H331 LPP sing 269 n n C33 H332 LPP sing 270 n n C34 C35 LPP sing 271 n n C34 H341 LPP sing 272 n n C34 H342 LPP sing 273 n n C35 C36 LPP sing 274 n n C35 H351 LPP sing 275 n n C35 H352 LPP sing 276 n n C36 C37 LPP sing 277 n n C36 H361 LPP sing 278 n n C36 H362 LPP sing 279 n n C37 C38 LPP sing 280 n n C37 H371 LPP sing 281 n n C37 H372 LPP sing 282 n n C38 C39 LPP sing 283 n n C38 H381 LPP sing 284 n n C38 H382 LPP sing 285 n n C39 C40 LPP sing 286 n n C39 H391 LPP sing 287 n n C39 H392 LPP sing 288 n n C40 C41 LPP sing 289 n n C40 H401 LPP sing 290 n n C40 H402 LPP sing 291 n n C41 C42 LPP sing 292 n n C41 H411 LPP sing 293 n n C41 H412 LPP sing 294 n n C42 C43 LPP sing 295 n n C42 H421 LPP sing 296 n n C42 H422 LPP sing 297 n n C43 C44 LPP sing 298 n n C43 H431 LPP sing 299 n n C43 H432 LPP sing 300 n n C44 H441 LPP sing 301 n n C44 H442 LPP sing 302 n n C44 H443 LPP sing 303 n n # _atom_sites.entry_id 7CH9 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 5 LPP A 1 301 301 LPP PEF . N 5 LPP B 1 201 201 LPP PEF . O 5 LPP B 1 202 301 LPP PEF . P 5 LPP C 1 201 201 LPP PEF . Q 5 LPP C 1 202 201 LPP PEF . R 5 LPP E 1 201 201 LPP PEF . S 5 LPP F 1 201 201 LPP PEF . T 5 LPP G 1 301 4 LPP PEF . U 5 LPP G 1 302 5 LPP PEF . V 5 LPP H 1 301 1 LPP PEF . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P1 LPP . . . U 5 141.05 133.898 106.531 1 80.3 ? P1 LPP 302 G 1 HETATM 2 O O2 LPP . . . U 5 142.312 133.122 106.261 1 80.3 ? O2 LPP 302 G 1 HETATM 3 O O3 LPP . . . U 5 141.021 135.127 105.66 1 80.3 ? O3 LPP 302 G 1 HETATM 4 O O4 LPP . . . U 5 139.863 133.03 106.205 1 80.3 ? O4 LPP 302 G 1 HETATM 5 O O5 LPP . . . U 5 140.996 134.34 108.117 1 80.3 ? O5 LPP 302 G 1 HETATM 6 C C6 LPP . . . U 5 141.126 135.695 108.438 1 80.3 ? C6 LPP 302 G 1 HETATM 7 C C7 LPP . . . U 5 140.218 136.03 109.619 1 80.3 ? C7 LPP 302 G 1 HETATM 8 C C8 LPP . . . U 5 140.545 135.123 110.8 1 80.3 ? C8 LPP 302 G 1 HETATM 9 O O9 LPP . . . U 5 140.461 137.349 110.004 1 80.3 ? O9 LPP 302 G 1 HETATM 10 O O27 LPP . . . U 5 140.55 135.904 111.96 1 80.3 ? O27 LPP 302 G 1 HETATM 11 C C11 LPP . . . U 5 139.334 138.168 110.107 1 80.3 ? C11 LPP 302 G 1 HETATM 12 O O10 LPP . . . U 5 138.255 137.746 109.878 1 80.3 ? O10 LPP 302 G 1 HETATM 13 C C12 LPP . . . U 5 139.52 139.625 110.513 1 80.3 ? C12 LPP 302 G 1 HETATM 14 C C13 LPP . . . U 5 138.604 140.06 111.649 1 80.3 ? C13 LPP 302 G 1 HETATM 15 C C14 LPP . . . U 5 138.992 139.432 112.984 1 80.3 ? C14 LPP 302 G 1 HETATM 16 C C15 LPP . . . U 5 138.644 140.325 114.173 1 80.3 ? C15 LPP 302 G 1 HETATM 17 C C16 LPP . . . U 5 139.488 139.994 115.403 1 80.3 ? C16 LPP 302 G 1 HETATM 18 C C17 LPP . . . U 5 138.891 140.534 116.702 1 80.3 ? C17 LPP 302 G 1 HETATM 19 C C18 LPP . . . U 5 139.035 142.05 116.826 1 80.3 ? C18 LPP 302 G 1 HETATM 20 C C19 LPP . . . U 5 138.952 142.528 118.275 1 80.3 ? C19 LPP 302 G 1 HETATM 21 C C20 LPP . . . U 5 138.174 143.834 118.431 1 80.3 ? C20 LPP 302 G 1 HETATM 22 C C21 LPP . . . U 5 137.932 144.178 119.899 1 80.3 ? C21 LPP 302 G 1 HETATM 23 C C22 LPP . . . U 5 137.593 145.652 120.107 1 80.3 ? C22 LPP 302 G 1 HETATM 24 C C23 LPP . . . U 5 136.092 145.914 120.001 1 80.3 ? C23 LPP 302 G 1 HETATM 25 C C24 LPP . . . U 5 135.676 147.226 120.662 1 80.3 ? C24 LPP 302 G 1 HETATM 26 C C25 LPP . . . U 5 134.801 148.084 119.749 1 80.3 ? C25 LPP 302 G 1 HETATM 27 C C26 LPP . . . U 5 133.66 148.763 120.503 1 80.3 ? C26 LPP 302 G 1 HETATM 28 C C29 LPP . . . U 5 140.28 135.197 113.138 1 80.3 ? C29 LPP 302 G 1 HETATM 29 O O28 LPP . . . U 5 140.977 134.297 113.461 1 80.3 ? O28 LPP 302 G 1 HETATM 30 C C30 LPP . . . U 5 139.096 135.587 114.018 1 80.3 ? C30 LPP 302 G 1 HETATM 31 C C31 LPP . . . U 5 139.173 134.961 115.408 1 80.3 ? C31 LPP 302 G 1 HETATM 32 C C32 LPP . . . U 5 139.001 136 116.515 1 80.3 ? C32 LPP 302 G 1 HETATM 33 C C33 LPP . . . U 5 139.255 135.428 117.909 1 80.3 ? C33 LPP 302 G 1 HETATM 34 C C34 LPP . . . U 5 139.996 136.406 118.822 1 80.3 ? C34 LPP 302 G 1 HETATM 35 C C35 LPP . . . U 5 140.881 135.693 119.841 1 80.3 ? C35 LPP 302 G 1 HETATM 36 C C36 LPP . . . U 5 140.478 136.001 121.282 1 80.3 ? C36 LPP 302 G 1 HETATM 37 C C37 LPP . . . U 5 141.686 136.258 122.179 1 80.3 ? C37 LPP 302 G 1 HETATM 38 C C38 LPP . . . U 5 142.451 134.972 122.486 1 80.3 ? C38 LPP 302 G 1 HETATM 39 C C39 LPP . . . U 5 143.411 135.111 123.666 1 80.3 ? C39 LPP 302 G 1 HETATM 40 C C40 LPP . . . U 5 144.124 133.799 123.991 1 80.3 ? C40 LPP 302 G 1 HETATM 41 C C41 LPP . . . U 5 144.024 133.429 125.47 1 80.3 ? C41 LPP 302 G 1 HETATM 42 C C42 LPP . . . U 5 144.907 132.239 125.842 1 80.3 ? C42 LPP 302 G 1 HETATM 43 C C43 LPP . . . U 5 145.932 132.594 126.917 1 80.3 ? C43 LPP 302 G 1 HETATM 44 C C44 LPP . . . U 5 145.62 131.934 128.258 1 80.3 ? C44 LPP 302 G 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 44 #