data_7CI7 # _model_server_result.job_id 0SVmbxopU5xaBQ5ex-2Yfw _model_server_result.datetime_utc '2024-11-08 08:34:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ci7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1300}' # _entry.id 7CI7 # _exptl.entry_id 7CI7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 484.608 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2R,3R)-2-azanyl-1-[4-[[4-[2-[4-(hydroxymethyl)phenyl]ethynyl]phenyl]methyl]piperidin-1-yl]-4-methylsulfonyl-3-oxidanyl-butan-1-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.96 _cell.angle_gamma 90 _cell.entry_id 7CI7 _cell.length_a 35.716 _cell.length_b 67.046 _cell.length_c 63.258 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7CI7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 78 A HIS 78 1_555 C ZN ZN . A ZN 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? metalc ? metalc2 A NE2 HIS 237 A HIS 237 1_555 C ZN ZN . A ZN 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc3 A OD1 ASP 241 A ASP 241 1_555 C ZN ZN . A ZN 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.99 ? metalc ? metalc4 B O26 FY9 . A FY9 1300 1_555 C ZN ZN . A ZN 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc5 B N28 FY9 . A FY9 1300 1_555 C ZN ZN . A ZN 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? # _chem_comp.formula 'C26 H32 N2 O5 S' _chem_comp.formula_weight 484.608 _chem_comp.id FY9 _chem_comp.mon_nstd_flag . _chem_comp.name (2R,3R)-2-azanyl-1-[4-[[4-[2-[4-(hydroxymethyl)phenyl]ethynyl]phenyl]methyl]piperidin-1-yl]-4-methylsulfonyl-3-oxidanyl-butan-1-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N28 C25 FY9 sing 83 n n O30 C27 FY9 sing 84 n n C25 C24 FY9 sing 85 n n C25 C27 FY9 sing 86 n n O26 C24 FY9 doub 87 n n C24 N19 FY9 sing 88 n n C27 C29 FY9 sing 89 n n O33 S31 FY9 doub 90 n n N19 C20 FY9 sing 91 n n N19 C18 FY9 sing 92 n n C29 S31 FY9 sing 93 n n C20 C21 FY9 sing 94 n n C18 C17 FY9 sing 95 n n S31 O34 FY9 doub 96 n n S31 C32 FY9 sing 97 n n C21 C16 FY9 sing 98 n n C17 C16 FY9 sing 99 n n C16 C15 FY9 sing 100 n n C15 C12 FY9 sing 101 n n C12 C13 FY9 doub 102 n y C12 C11 FY9 sing 103 n y C13 C14 FY9 sing 104 n y C11 C10 FY9 doub 105 n y C14 C9 FY9 doub 106 n y C9 C10 FY9 sing 107 n y C9 C8 FY9 sing 108 n n C8 C7 FY9 trip 109 n n C7 C4 FY9 sing 110 n n C3 C4 FY9 doub 111 n y C3 C2 FY9 sing 112 n y C4 C5 FY9 sing 113 n y C2 C1 FY9 doub 114 n y C5 C6 FY9 doub 115 n y C1 C6 FY9 sing 116 n y C1 C22 FY9 sing 117 n n C22 O23 FY9 sing 118 n n C2 H1 FY9 sing 119 n n C3 H2 FY9 sing 120 n n C5 H3 FY9 sing 121 n n C6 H4 FY9 sing 122 n n C10 H5 FY9 sing 123 n n C11 H6 FY9 sing 124 n n C13 H7 FY9 sing 125 n n C14 H8 FY9 sing 126 n n C15 H9 FY9 sing 127 n n C15 H10 FY9 sing 128 n n C16 H11 FY9 sing 129 n n C17 H12 FY9 sing 130 n n C17 H13 FY9 sing 131 n n C18 H14 FY9 sing 132 n n C18 H15 FY9 sing 133 n n C20 H16 FY9 sing 134 n n C20 H17 FY9 sing 135 n n C21 H18 FY9 sing 136 n n C21 H19 FY9 sing 137 n n C22 H20 FY9 sing 138 n n C22 H21 FY9 sing 139 n n O23 H22 FY9 sing 140 n n C25 H23 FY9 sing 141 n n C27 H24 FY9 sing 142 n n N28 H25 FY9 sing 143 n n N28 H26 FY9 sing 144 n n C29 H28 FY9 sing 145 n n C29 H29 FY9 sing 146 n n O30 H30 FY9 sing 147 n n C32 H31 FY9 sing 148 n n C32 H32 FY9 sing 149 n n C32 H33 FY9 sing 150 n n # _atom_sites.entry_id 7CI7 _atom_sites.fract_transf_matrix[1][1] 0.027999 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000471 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014915 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015811 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FY9 A 1 1300 1300 FY9 U01 . C 3 ZN A 1 1301 1301 ZN ZN . D 4 HOH A 1 1401 2139 HOH HOH . D 4 HOH A 2 1402 2125 HOH HOH . D 4 HOH A 3 1403 2033 HOH HOH . D 4 HOH A 4 1404 2131 HOH HOH . D 4 HOH A 5 1405 2069 HOH HOH . D 4 HOH A 6 1406 2099 HOH HOH . D 4 HOH A 7 1407 2142 HOH HOH . D 4 HOH A 8 1408 2102 HOH HOH . D 4 HOH A 9 1409 2024 HOH HOH . D 4 HOH A 10 1410 2026 HOH HOH . D 4 HOH A 11 1411 2107 HOH HOH . D 4 HOH A 12 1412 2108 HOH HOH . D 4 HOH A 13 1413 2005 HOH HOH . D 4 HOH A 14 1414 2004 HOH HOH . D 4 HOH A 15 1415 2066 HOH HOH . D 4 HOH A 16 1416 2044 HOH HOH . D 4 HOH A 17 1417 2111 HOH HOH . D 4 HOH A 18 1418 2140 HOH HOH . D 4 HOH A 19 1419 2117 HOH HOH . D 4 HOH A 20 1420 2002 HOH HOH . D 4 HOH A 21 1421 2043 HOH HOH . D 4 HOH A 22 1422 2106 HOH HOH . D 4 HOH A 23 1423 2086 HOH HOH . D 4 HOH A 24 1424 2028 HOH HOH . D 4 HOH A 25 1425 2091 HOH HOH . D 4 HOH A 26 1426 2134 HOH HOH . D 4 HOH A 27 1427 2095 HOH HOH . D 4 HOH A 28 1428 2064 HOH HOH . D 4 HOH A 29 1429 2034 HOH HOH . D 4 HOH A 30 1430 2021 HOH HOH . D 4 HOH A 31 1431 2039 HOH HOH . D 4 HOH A 32 1432 2057 HOH HOH . D 4 HOH A 33 1433 2035 HOH HOH . D 4 HOH A 34 1434 2089 HOH HOH . D 4 HOH A 35 1435 2012 HOH HOH . D 4 HOH A 36 1436 2081 HOH HOH . D 4 HOH A 37 1437 2122 HOH HOH . D 4 HOH A 38 1438 2092 HOH HOH . D 4 HOH A 39 1439 2065 HOH HOH . D 4 HOH A 40 1440 2048 HOH HOH . D 4 HOH A 41 1441 2062 HOH HOH . D 4 HOH A 42 1442 2094 HOH HOH . D 4 HOH A 43 1443 2009 HOH HOH . D 4 HOH A 44 1444 2074 HOH HOH . D 4 HOH A 45 1445 2036 HOH HOH . D 4 HOH A 46 1446 2093 HOH HOH . D 4 HOH A 47 1447 2001 HOH HOH . D 4 HOH A 48 1448 2045 HOH HOH . D 4 HOH A 49 1449 2101 HOH HOH . D 4 HOH A 50 1450 2078 HOH HOH . D 4 HOH A 51 1451 2010 HOH HOH . D 4 HOH A 52 1452 2018 HOH HOH . D 4 HOH A 53 1453 2006 HOH HOH . D 4 HOH A 54 1454 2029 HOH HOH . D 4 HOH A 55 1455 2013 HOH HOH . D 4 HOH A 56 1456 2041 HOH HOH . D 4 HOH A 57 1457 2040 HOH HOH . D 4 HOH A 58 1458 2016 HOH HOH . D 4 HOH A 59 1459 2011 HOH HOH . D 4 HOH A 60 1460 2058 HOH HOH . D 4 HOH A 61 1461 2109 HOH HOH . D 4 HOH A 62 1462 2113 HOH HOH . D 4 HOH A 63 1463 2090 HOH HOH . D 4 HOH A 64 1464 2071 HOH HOH . D 4 HOH A 65 1465 2063 HOH HOH . D 4 HOH A 66 1466 2085 HOH HOH . D 4 HOH A 67 1467 2023 HOH HOH . D 4 HOH A 68 1468 2073 HOH HOH . D 4 HOH A 69 1469 2030 HOH HOH . D 4 HOH A 70 1470 2008 HOH HOH . D 4 HOH A 71 1471 2027 HOH HOH . D 4 HOH A 72 1472 2020 HOH HOH . D 4 HOH A 73 1473 2025 HOH HOH . D 4 HOH A 74 1474 2077 HOH HOH . D 4 HOH A 75 1475 2019 HOH HOH . D 4 HOH A 76 1476 2127 HOH HOH . D 4 HOH A 77 1477 2015 HOH HOH . D 4 HOH A 78 1478 2076 HOH HOH . D 4 HOH A 79 1479 2049 HOH HOH . D 4 HOH A 80 1480 2014 HOH HOH . D 4 HOH A 81 1481 2070 HOH HOH . D 4 HOH A 82 1482 2022 HOH HOH . D 4 HOH A 83 1483 2042 HOH HOH . D 4 HOH A 84 1484 2105 HOH HOH . D 4 HOH A 85 1485 2054 HOH HOH . D 4 HOH A 86 1486 2080 HOH HOH . D 4 HOH A 87 1487 2087 HOH HOH . D 4 HOH A 88 1488 2067 HOH HOH . D 4 HOH A 89 1489 2017 HOH HOH . D 4 HOH A 90 1490 2038 HOH HOH . D 4 HOH A 91 1491 2046 HOH HOH . D 4 HOH A 92 1492 2141 HOH HOH . D 4 HOH A 93 1493 2059 HOH HOH . D 4 HOH A 94 1494 2088 HOH HOH . D 4 HOH A 95 1495 2121 HOH HOH . D 4 HOH A 96 1496 2112 HOH HOH . D 4 HOH A 97 1497 2003 HOH HOH . D 4 HOH A 98 1498 2084 HOH HOH . D 4 HOH A 99 1499 2031 HOH HOH . D 4 HOH A 100 1500 2037 HOH HOH . D 4 HOH A 101 1501 2051 HOH HOH . D 4 HOH A 102 1502 2116 HOH HOH . D 4 HOH A 103 1503 2123 HOH HOH . D 4 HOH A 104 1504 2061 HOH HOH . D 4 HOH A 105 1505 2079 HOH HOH . D 4 HOH A 106 1506 2047 HOH HOH . D 4 HOH A 107 1507 2130 HOH HOH . D 4 HOH A 108 1508 2110 HOH HOH . D 4 HOH A 109 1509 2132 HOH HOH . D 4 HOH A 110 1510 2104 HOH HOH . D 4 HOH A 111 1511 2129 HOH HOH . D 4 HOH A 112 1512 2118 HOH HOH . D 4 HOH A 113 1513 2082 HOH HOH . D 4 HOH A 114 1514 2096 HOH HOH . D 4 HOH A 115 1515 2007 HOH HOH . D 4 HOH A 116 1516 2068 HOH HOH . D 4 HOH A 117 1517 2060 HOH HOH . D 4 HOH A 118 1518 2128 HOH HOH . D 4 HOH A 119 1519 2137 HOH HOH . D 4 HOH A 120 1520 2114 HOH HOH . D 4 HOH A 121 1521 2083 HOH HOH . D 4 HOH A 122 1522 2115 HOH HOH . D 4 HOH A 123 1523 2032 HOH HOH . D 4 HOH A 124 1524 2056 HOH HOH . D 4 HOH A 125 1525 2120 HOH HOH . D 4 HOH A 126 1526 2055 HOH HOH . D 4 HOH A 127 1527 2135 HOH HOH . D 4 HOH A 128 1528 2136 HOH HOH . D 4 HOH A 129 1529 2124 HOH HOH . D 4 HOH A 130 1530 2138 HOH HOH . D 4 HOH A 131 1531 2103 HOH HOH . D 4 HOH A 132 1532 2052 HOH HOH . D 4 HOH A 133 1533 2119 HOH HOH . D 4 HOH A 134 1534 2053 HOH HOH . D 4 HOH A 135 1535 2075 HOH HOH . D 4 HOH A 136 1536 2126 HOH HOH . D 4 HOH A 137 1537 2098 HOH HOH . D 4 HOH A 138 1538 2100 HOH HOH . D 4 HOH A 139 1539 2097 HOH HOH . D 4 HOH A 140 1540 2050 HOH HOH . D 4 HOH A 141 1541 2133 HOH HOH . D 4 HOH A 142 1542 2072 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 FY9 . . . B 2 -3.015 2.858 33.384 1 43.33 ? C1 FY9 1300 A 1 HETATM 2 C C2 FY9 . . . B 2 -3.119 2.033 32.269 1 44.18 ? C2 FY9 1300 A 1 HETATM 3 C C3 FY9 . . . B 2 -2.014 1.824 31.449 1 42.68 ? C3 FY9 1300 A 1 HETATM 4 C C4 FY9 . . . B 2 -0.804 2.443 31.742 1 41.33 ? C4 FY9 1300 A 1 HETATM 5 C C5 FY9 . . . B 2 -0.7 3.263 32.86 1 41.98 ? C5 FY9 1300 A 1 HETATM 6 C C6 FY9 . . . B 2 -1.803 3.473 33.678 1 43.68 ? C6 FY9 1300 A 1 HETATM 7 C C7 FY9 . . . B 2 0.227 2.251 30.998 1 40.2 ? C7 FY9 1300 A 1 HETATM 8 C C8 FY9 . . . B 2 1.203 2.05 30.363 1 38.82 ? C8 FY9 1300 A 1 HETATM 9 C C9 FY9 . . . B 2 2.297 1.798 29.736 1 38.71 ? C9 FY9 1300 A 1 HETATM 10 C C10 FY9 . . . B 2 3.331 2.728 29.738 1 38.11 ? C10 FY9 1300 A 1 HETATM 11 C C11 FY9 . . . B 2 4.521 2.45 29.074 1 39.21 ? C11 FY9 1300 A 1 HETATM 12 C C12 FY9 . . . B 2 4.676 1.242 28.403 1 37.87 ? C12 FY9 1300 A 1 HETATM 13 C C13 FY9 . . . B 2 3.648 0.305 28.417 1 37.42 ? C13 FY9 1300 A 1 HETATM 14 C C14 FY9 . . . B 2 2.459 0.584 29.081 1 38.57 ? C14 FY9 1300 A 1 HETATM 15 C C15 FY9 . . . B 2 5.974 0.921 27.696 1 39.01 ? C15 FY9 1300 A 1 HETATM 16 C C16 FY9 . . . B 2 6.132 1.477 26.275 1 40.7 ? C16 FY9 1300 A 1 HETATM 17 C C17 FY9 . . . B 2 7.474 1.11 25.618 1 40.56 ? C17 FY9 1300 A 1 HETATM 18 C C18 FY9 . . . B 2 7.589 1.408 24.105 1 37.47 ? C18 FY9 1300 A 1 HETATM 19 N N19 FY9 . . . B 2 6.378 0.997 23.385 1 34.38 ? N19 FY9 1300 A 1 HETATM 20 C C20 FY9 . . . B 2 5.142 1.466 23.954 1 40.7 ? C20 FY9 1300 A 1 HETATM 21 C C21 FY9 . . . B 2 5.041 0.91 25.374 1 41.17 ? C21 FY9 1300 A 1 HETATM 22 C C22 FY9 . . . B 2 -4.213 3.087 34.278 1 45.88 ? C22 FY9 1300 A 1 HETATM 23 O O23 FY9 . . . B 2 -4.143 4.402 34.841 1 48.36 ? O23 FY9 1300 A 1 HETATM 24 C C24 FY9 . . . B 2 6.299 0.235 22.316 1 31.26 ? C24 FY9 1300 A 1 HETATM 25 C C25 FY9 . . . B 2 7.525 -0.378 21.764 1 32.22 ? C25 FY9 1300 A 1 HETATM 26 O O26 FY9 . . . B 2 5.235 -0.108 21.833 1 26.19 ? O26 FY9 1300 A 1 HETATM 27 C C27 FY9 . . . B 2 7.478 -1.714 22.547 1 35.22 ? C27 FY9 1300 A 1 HETATM 28 N N28 FY9 . . . B 2 7.259 -0.39 20.301 1 26.76 ? N28 FY9 1300 A 1 HETATM 29 C C29 FY9 . . . B 2 8.686 -1.975 23.491 1 38.53 ? C29 FY9 1300 A 1 HETATM 30 O O30 FY9 . . . B 2 7.133 -2.804 21.678 1 39 ? O30 FY9 1300 A 1 HETATM 31 S S31 FY9 . . . B 2 8.781 -3.466 24.231 1 41.71 ? S31 FY9 1300 A 1 HETATM 32 C C32 FY9 . . . B 2 9.427 -3.343 25.79 1 39.72 ? C32 FY9 1300 A 1 HETATM 33 O O33 FY9 . . . B 2 9.593 -4.284 23.358 1 39.11 ? O33 FY9 1300 A 1 HETATM 34 O O34 FY9 . . . B 2 7.464 -4.033 24.316 1 35.51 ? O34 FY9 1300 A 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 333 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 34 #