data_7CJA # _model_server_result.job_id 8hR-LJnc8tjbHeM1iDLxFQ _model_server_result.datetime_utc '2025-01-06 13:42:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7cja # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":801}' # _entry.id 7CJA # _exptl.entry_id 7CJA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 445.517 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-(cyclopentylmethylamino)-2-[[2-methoxy-4-(2-oxidanylidenepyrrolidin-1-yl)phenyl]amino]-7H-pyrrolo[2,3-d]pyrimidine-5-carbonitrile _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7CJA _cell.length_a 70.644 _cell.length_b 110.536 _cell.length_c 112.456 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7CJA _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall 'I 2 2' _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ASP 160 A ASP 674 1_555 A N TPO 161 A TPO 675 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale2 A C GLY 171 A GLY 685 1_555 A N TPO 172 A TPO 686 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale3 A C TPO 172 A TPO 686 1_555 A N VAL 173 A VAL 687 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? # _chem_comp.formula 'C24 H27 N7 O2' _chem_comp.formula_weight 445.517 _chem_comp.id G0U _chem_comp.mon_nstd_flag . _chem_comp.name 4-(cyclopentylmethylamino)-2-[[2-methoxy-4-(2-oxidanylidenepyrrolidin-1-yl)phenyl]amino]-7H-pyrrolo[2,3-d]pyrimidine-5-carbonitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O33 C32 G0U doub 83 n n C01 O02 G0U sing 84 n n C31 C32 G0U sing 85 n n C31 C30 G0U sing 86 n n C32 N28 G0U sing 87 n n O02 C03 G0U sing 88 n n C27 C03 G0U doub 89 n y C27 C26 G0U sing 90 n y C30 C29 G0U sing 91 n n N28 C26 G0U sing 92 n n N28 C29 G0U sing 93 n n C03 C04 G0U sing 94 n y C26 C25 G0U doub 95 n y C04 N05 G0U sing 96 n n C04 C24 G0U doub 97 n y C25 C24 G0U sing 98 n y N05 C06 G0U sing 99 n n C06 N07 G0U doub 100 n y C06 N23 G0U sing 101 n y N07 C08 G0U sing 102 n y N23 C15 G0U doub 103 n y C08 C09 G0U doub 104 n y C08 N12 G0U sing 105 n y C17 N16 G0U sing 106 n n C17 C18 G0U sing 107 n n C15 N16 G0U sing 108 n n C15 C09 G0U sing 109 n y C09 C10 G0U sing 110 n y N12 C11 G0U sing 111 n y C19 C18 G0U sing 112 n n C19 C20 G0U sing 113 n n C18 C22 G0U sing 114 n n C11 C10 G0U doub 115 n y C10 C13 G0U sing 116 n n C20 C21 G0U sing 117 n n C22 C21 G0U sing 118 n n C13 N14 G0U trip 119 n n N12 H1 G0U sing 120 n n C17 H2 G0U sing 121 n n C17 H3 G0U sing 122 n n C20 H4 G0U sing 123 n n C20 H5 G0U sing 124 n n C21 H6 G0U sing 125 n n C21 H7 G0U sing 126 n n C22 H8 G0U sing 127 n n C22 H9 G0U sing 128 n n C24 H10 G0U sing 129 n n C01 H11 G0U sing 130 n n C01 H12 G0U sing 131 n n C01 H13 G0U sing 132 n n C11 H14 G0U sing 133 n n C18 H15 G0U sing 134 n n C19 H16 G0U sing 135 n n C19 H17 G0U sing 136 n n C25 H18 G0U sing 137 n n C27 H19 G0U sing 138 n n C29 H20 G0U sing 139 n n C29 H21 G0U sing 140 n n C30 H22 G0U sing 141 n n C30 H23 G0U sing 142 n n C31 H24 G0U sing 143 n n C31 H25 G0U sing 144 n n N05 H26 G0U sing 145 n n N16 H27 G0U sing 146 n n # _atom_sites.entry_id 7CJA _atom_sites.fract_transf_matrix[1][1] 0.014155 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009047 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008892 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 G0U A 1 801 801 G0U LIG . C 3 HOH A 1 901 9 HOH HOH . C 3 HOH A 2 902 4 HOH HOH . C 3 HOH A 3 903 3 HOH HOH . C 3 HOH A 4 904 5 HOH HOH . C 3 HOH A 5 905 11 HOH HOH . C 3 HOH A 6 906 8 HOH HOH . C 3 HOH A 7 907 1 HOH HOH . C 3 HOH A 8 908 13 HOH HOH . C 3 HOH A 9 909 2 HOH HOH . C 3 HOH A 10 910 10 HOH HOH . C 3 HOH A 11 911 6 HOH HOH . C 3 HOH A 12 912 7 HOH HOH . C 3 HOH A 13 913 12 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 G0U . . . B 2 3.24 33.267 12.782 1 57.42 ? C10 G0U 801 A 1 HETATM 2 N N12 G0U . . . B 2 2.005 31.722 11.809 1 59.97 ? N12 G0U 801 A 1 HETATM 3 C C13 G0U . . . B 2 4.234 33.949 13.702 1 61.22 ? C13 G0U 801 A 1 HETATM 4 C C15 G0U . . . B 2 2.341 35.184 11.267 1 55.08 ? C15 G0U 801 A 1 HETATM 5 C C17 G0U . . . B 2 2.598 37.598 11.257 1 59.85 ? C17 G0U 801 A 1 HETATM 6 C C20 G0U . . . B 2 1.063 40.453 12.833 1 67.71 ? C20 G0U 801 A 1 HETATM 7 C C21 G0U . . . B 2 1.374 39.463 14.121 1 63.1 ? C21 G0U 801 A 1 HETATM 8 C C22 G0U . . . B 2 1.717 38.277 13.549 1 60.37 ? C22 G0U 801 A 1 HETATM 9 C C24 G0U . . . B 2 -0.46 37.264 9.064 1 55.35 ? C24 G0U 801 A 1 HETATM 10 C C26 G0U . . . B 2 -0.491 38.699 7.133 1 61.65 ? C26 G0U 801 A 1 HETATM 11 C C01 G0U . . . B 2 -0.212 35.394 4.72 1 61.35 ? C01 G0U 801 A 1 HETATM 12 C C03 G0U . . . B 2 -0.144 36.356 6.856 1 58.49 ? C03 G0U 801 A 1 HETATM 13 C C04 G0U . . . B 2 -0.229 36.179 8.213 1 61.25 ? C04 G0U 801 A 1 HETATM 14 C C06 G0U . . . B 2 0.797 34.445 9.72 1 52.4 ? C06 G0U 801 A 1 HETATM 15 C C08 G0U . . . B 2 1.727 32.899 11.173 1 58.84 ? C08 G0U 801 A 1 HETATM 16 C C09 G0U . . . B 2 2.487 33.885 11.77 1 51.7 ? C09 G0U 801 A 1 HETATM 17 C C11 G0U . . . B 2 2.911 31.919 12.772 1 56.68 ? C11 G0U 801 A 1 HETATM 18 C C18 G0U . . . B 2 2.618 38.693 12.309 1 63.25 ? C18 G0U 801 A 1 HETATM 19 C C19 G0U . . . B 2 1.918 40.056 11.835 1 72.84 ? C19 G0U 801 A 1 HETATM 20 C C25 G0U . . . B 2 -0.586 38.536 8.521 1 58.9 ? C25 G0U 801 A 1 HETATM 21 C C27 G0U . . . B 2 -0.267 37.61 6.309 1 59.7 ? C27 G0U 801 A 1 HETATM 22 C C29 G0U . . . B 2 -0.557 41.386 7.3 1 70.12 ? C29 G0U 801 A 1 HETATM 23 C C30 G0U . . . B 2 -1.147 42.348 6.504 1 68.08 ? C30 G0U 801 A 1 HETATM 24 C C31 G0U . . . B 2 -0.981 41.848 5.064 1 59.39 ? C31 G0U 801 A 1 HETATM 25 C C32 G0U . . . B 2 -0.905 40.263 5.193 1 67.17 ? C32 G0U 801 A 1 HETATM 26 N N05 G0U . . . B 2 -0.088 34.797 8.643 1 63.84 ? N05 G0U 801 A 1 HETATM 27 N N07 G0U . . . B 2 0.883 33.215 10.145 1 56.45 ? N07 G0U 801 A 1 HETATM 28 N N14 G0U . . . B 2 4.972 34.458 14.382 1 66.17 ? N14 G0U 801 A 1 HETATM 29 N N16 G0U . . . B 2 3.073 36.325 11.758 1 51.75 ? N16 G0U 801 A 1 HETATM 30 N N23 G0U . . . B 2 1.503 35.39 10.259 1 55.42 ? N23 G0U 801 A 1 HETATM 31 N N28 G0U . . . B 2 -0.641 40.006 6.519 1 62.47 ? N28 G0U 801 A 1 HETATM 32 O O02 G0U . . . B 2 0.064 35.227 6.08 1 61.9 ? O02 G0U 801 A 1 HETATM 33 O O33 G0U . . . B 2 -1.041 39.484 4.297 1 69.13 ? O33 G0U 801 A 1 HETATM 34 H H1 G0U . . . B 2 1.59 30.839 11.585 1 71.85 ? H1 G0U 801 A 1 HETATM 35 H H2 G0U . . . B 2 1.579 37.474 10.905 1 71.7 ? H2 G0U 801 A 1 HETATM 36 H H3 G0U . . . B 2 3.229 37.902 10.429 1 71.7 ? H3 G0U 801 A 1 HETATM 37 H H4 G0U . . . B 2 0.034 40.333 12.511 1 81.13 ? H4 G0U 801 A 1 HETATM 38 H H5 G0U . . . B 2 1.259 41.486 13.102 1 81.13 ? H5 G0U 801 A 1 HETATM 39 H H6 G0U . . . B 2 0.488 39.347 14.735 1 75.6 ? H6 G0U 801 A 1 HETATM 40 H H7 G0U . . . B 2 2.198 39.853 14.711 1 75.6 ? H7 G0U 801 A 1 HETATM 41 H H8 G0U . . . B 2 2.286 37.67 14.245 1 72.33 ? H8 G0U 801 A 1 HETATM 42 H H9 G0U . . . B 2 0.832 37.747 13.215 1 72.33 ? H9 G0U 801 A 1 HETATM 43 H H10 G0U . . . B 2 -0.54 37.114 10.134 1 66.31 ? H10 G0U 801 A 1 HETATM 44 H H11 G0U . . . B 2 -1.271 35.597 4.588 1 73.51 ? H11 G0U 801 A 1 HETATM 45 H H12 G0U . . . B 2 0.367 36.227 4.333 1 73.51 ? H12 G0U 801 A 1 HETATM 46 H H13 G0U . . . B 2 0.053 34.488 4.183 1 73.51 ? H13 G0U 801 A 1 HETATM 47 H H14 G0U . . . B 2 3.316 31.16 13.43 1 67.9 ? H14 G0U 801 A 1 HETATM 48 H H15 G0U . . . B 2 3.655 38.873 12.563 1 75.78 ? H15 G0U 801 A 1 HETATM 49 H H16 G0U . . . B 2 1.357 39.881 10.923 1 87.29 ? H16 G0U 801 A 1 HETATM 50 H H17 G0U . . . B 2 2.673 40.819 11.677 1 87.29 ? H17 G0U 801 A 1 HETATM 51 H H18 G0U . . . B 2 -0.756 39.392 9.164 1 70.56 ? H18 G0U 801 A 1 HETATM 52 H H19 G0U . . . B 2 -0.19 37.746 5.237 1 71.53 ? H19 G0U 801 A 1 HETATM 53 H H20 G0U . . . B 2 -1.095 41.307 8.239 1 84.03 ? H20 G0U 801 A 1 HETATM 54 H H21 G0U . . . B 2 0.482 41.644 7.476 1 84.03 ? H21 G0U 801 A 1 HETATM 55 H H22 G0U . . . B 2 -2.201 42.44 6.748 1 81.58 ? H22 G0U 801 A 1 HETATM 56 H H23 G0U . . . B 2 -0.641 43.299 6.63 1 81.58 ? H23 G0U 801 A 1 HETATM 57 H H24 G0U . . . B 2 -1.836 42.137 4.463 1 71.15 ? H24 G0U 801 A 1 HETATM 58 H H25 G0U . . . B 2 -0.063 42.236 4.634 1 71.15 ? H25 G0U 801 A 1 HETATM 59 H H26 G0U . . . B 2 -0.614 34.081 8.182 1 76.49 ? H26 G0U 801 A 1 HETATM 60 H H27 G0U . . . B 2 3.843 36.244 12.391 1 61.98 ? H27 G0U 801 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 60 #