data_7CKG # _model_server_result.job_id M1GW_NDPIgObqpU4uoI3hw _model_server_result.datetime_utc '2024-11-21 22:59:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ckg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 7CKG # _exptl.entry_id 7CKG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 237.37 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-(trimethylsilyl)-L-phenylalanine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7CKG _cell.length_a 71.102 _cell.length_b 83.426 _cell.length_c 106.235 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7CKG _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D 1 1 B,C,E 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_454 -x-1/2,-y,z-1/2 -1 0 0 0 -1 0 0 0 1 -35.551 0 -53.1175 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C12 H19 N O2 Si' _chem_comp.formula_weight 237.37 _chem_comp.id TSQ _chem_comp.mon_nstd_flag n _chem_comp.name 4-(trimethylsilyl)-L-phenylalanine _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 SI1 TSQ sing 306 n n CE2 CD2 TSQ doub 307 n y CE2 CZ TSQ sing 308 n y CD2 CG TSQ sing 309 n y N CA TSQ sing 310 n n CA C TSQ sing 311 n n CA CB TSQ sing 312 n n C3 SI1 TSQ sing 313 n n SI1 CZ TSQ sing 314 n n SI1 C2 TSQ sing 315 n n CZ CE1 TSQ doub 316 n y O C TSQ doub 317 n n C OXT TSQ sing 318 n n CG CB TSQ sing 319 n n CG CD1 TSQ doub 320 n y CE1 CD1 TSQ sing 321 n y CE2 H1 TSQ sing 322 n n CB H4 TSQ sing 323 n n CB H3 TSQ sing 324 n n CA HA TSQ sing 325 n n C1 H5 TSQ sing 326 n n C1 H6 TSQ sing 327 n n C1 H7 TSQ sing 328 n n C2 H8 TSQ sing 329 n n C2 H9 TSQ sing 330 n n C2 H10 TSQ sing 331 n n C3 H11 TSQ sing 332 n n C3 H12 TSQ sing 333 n n C3 H13 TSQ sing 334 n n CE1 H14 TSQ sing 335 n n CD1 H15 TSQ sing 336 n n CD2 H16 TSQ sing 337 n n N H TSQ sing 338 n n N H2 TSQ sing 339 n n OXT HXT TSQ sing 340 n n # _atom_sites.entry_id 7CKG _atom_sites.fract_transf_matrix[1][1] 0.014064 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011987 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009413 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 TSQ B 1 501 501 TSQ TSF . D 3 HOH A 1 401 21 HOH HOH . D 3 HOH A 2 402 70 HOH HOH . D 3 HOH A 3 403 52 HOH HOH . D 3 HOH A 4 404 51 HOH HOH . D 3 HOH A 5 405 87 HOH HOH . D 3 HOH A 6 406 48 HOH HOH . D 3 HOH A 7 407 25 HOH HOH . D 3 HOH A 8 408 17 HOH HOH . D 3 HOH A 9 409 33 HOH HOH . D 3 HOH A 10 410 97 HOH HOH . D 3 HOH A 11 411 111 HOH HOH . D 3 HOH A 12 412 92 HOH HOH . D 3 HOH A 13 413 46 HOH HOH . D 3 HOH A 14 414 99 HOH HOH . D 3 HOH A 15 415 18 HOH HOH . D 3 HOH A 16 416 115 HOH HOH . D 3 HOH A 17 417 41 HOH HOH . D 3 HOH A 18 418 38 HOH HOH . D 3 HOH A 19 419 62 HOH HOH . D 3 HOH A 20 420 116 HOH HOH . D 3 HOH A 21 421 89 HOH HOH . D 3 HOH A 22 422 100 HOH HOH . D 3 HOH A 23 423 22 HOH HOH . D 3 HOH A 24 424 24 HOH HOH . D 3 HOH A 25 425 114 HOH HOH . D 3 HOH A 26 426 6 HOH HOH . D 3 HOH A 27 427 7 HOH HOH . D 3 HOH A 28 428 53 HOH HOH . D 3 HOH A 29 429 10 HOH HOH . D 3 HOH A 30 430 78 HOH HOH . D 3 HOH A 31 431 85 HOH HOH . D 3 HOH A 32 432 74 HOH HOH . D 3 HOH A 33 433 94 HOH HOH . D 3 HOH A 34 434 107 HOH HOH . D 3 HOH A 35 435 96 HOH HOH . D 3 HOH A 36 436 55 HOH HOH . D 3 HOH A 37 437 112 HOH HOH . D 3 HOH A 38 438 49 HOH HOH . D 3 HOH A 39 439 98 HOH HOH . D 3 HOH A 40 440 58 HOH HOH . D 3 HOH A 41 441 91 HOH HOH . D 3 HOH A 42 442 84 HOH HOH . D 3 HOH A 43 443 81 HOH HOH . D 3 HOH A 44 444 28 HOH HOH . D 3 HOH A 45 445 61 HOH HOH . D 3 HOH A 46 446 50 HOH HOH . D 3 HOH A 47 447 88 HOH HOH . D 3 HOH A 48 448 1 HOH HOH . D 3 HOH A 49 449 56 HOH HOH . D 3 HOH A 50 450 54 HOH HOH . D 3 HOH A 51 451 47 HOH HOH . D 3 HOH A 52 452 113 HOH HOH . D 3 HOH A 53 453 105 HOH HOH . D 3 HOH A 54 454 118 HOH HOH . D 3 HOH A 55 455 34 HOH HOH . D 3 HOH A 56 456 93 HOH HOH . D 3 HOH A 57 457 124 HOH HOH . D 3 HOH A 58 458 60 HOH HOH . D 3 HOH A 59 459 30 HOH HOH . D 3 HOH A 60 460 95 HOH HOH . E 3 HOH B 1 601 67 HOH HOH . E 3 HOH B 2 602 86 HOH HOH . E 3 HOH B 3 603 15 HOH HOH . E 3 HOH B 4 604 68 HOH HOH . E 3 HOH B 5 605 83 HOH HOH . E 3 HOH B 6 606 71 HOH HOH . E 3 HOH B 7 607 31 HOH HOH . E 3 HOH B 8 608 123 HOH HOH . E 3 HOH B 9 609 20 HOH HOH . E 3 HOH B 10 610 3 HOH HOH . E 3 HOH B 11 611 45 HOH HOH . E 3 HOH B 12 612 4 HOH HOH . E 3 HOH B 13 613 12 HOH HOH . E 3 HOH B 14 614 121 HOH HOH . E 3 HOH B 15 615 9 HOH HOH . E 3 HOH B 16 616 37 HOH HOH . E 3 HOH B 17 617 16 HOH HOH . E 3 HOH B 18 618 44 HOH HOH . E 3 HOH B 19 619 11 HOH HOH . E 3 HOH B 20 620 13 HOH HOH . E 3 HOH B 21 621 126 HOH HOH . E 3 HOH B 22 622 2 HOH HOH . E 3 HOH B 23 623 104 HOH HOH . E 3 HOH B 24 624 90 HOH HOH . E 3 HOH B 25 625 66 HOH HOH . E 3 HOH B 26 626 102 HOH HOH . E 3 HOH B 27 627 57 HOH HOH . E 3 HOH B 28 628 80 HOH HOH . E 3 HOH B 29 629 23 HOH HOH . E 3 HOH B 30 630 35 HOH HOH . E 3 HOH B 31 631 72 HOH HOH . E 3 HOH B 32 632 40 HOH HOH . E 3 HOH B 33 633 106 HOH HOH . E 3 HOH B 34 634 29 HOH HOH . E 3 HOH B 35 635 26 HOH HOH . E 3 HOH B 36 636 75 HOH HOH . E 3 HOH B 37 637 109 HOH HOH . E 3 HOH B 38 638 27 HOH HOH . E 3 HOH B 39 639 103 HOH HOH . E 3 HOH B 40 640 110 HOH HOH . E 3 HOH B 41 641 77 HOH HOH . E 3 HOH B 42 642 122 HOH HOH . E 3 HOH B 43 643 14 HOH HOH . E 3 HOH B 44 644 5 HOH HOH . E 3 HOH B 45 645 59 HOH HOH . E 3 HOH B 46 646 82 HOH HOH . E 3 HOH B 47 647 117 HOH HOH . E 3 HOH B 48 648 65 HOH HOH . E 3 HOH B 49 649 73 HOH HOH . E 3 HOH B 50 650 101 HOH HOH . E 3 HOH B 51 651 32 HOH HOH . E 3 HOH B 52 652 19 HOH HOH . E 3 HOH B 53 653 79 HOH HOH . E 3 HOH B 54 654 119 HOH HOH . E 3 HOH B 55 655 120 HOH HOH . E 3 HOH B 56 656 36 HOH HOH . E 3 HOH B 57 657 43 HOH HOH . E 3 HOH B 58 658 63 HOH HOH . E 3 HOH B 59 659 69 HOH HOH . E 3 HOH B 60 660 76 HOH HOH . E 3 HOH B 61 661 39 HOH HOH . E 3 HOH B 62 662 108 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CE2 TSQ . . . C 2 3.837 14.684 35.225 1 45.11 ? CE2 TSQ 501 B 1 HETATM 2 C CB TSQ . . . C 2 5.578 11.735 36.887 1 43.55 ? CB TSQ 501 B 1 HETATM 3 C CA TSQ . . . C 2 5.916 10.684 35.846 1 45.35 ? CA TSQ 501 B 1 HETATM 4 C C TSQ . . . C 2 7.03 9.712 36.365 1 43.64 ? C TSQ 501 B 1 HETATM 5 C C1 TSQ . . . C 2 0.894 16.668 34.472 1 52.78 ? C1 TSQ 501 B 1 HETATM 6 C C2 TSQ . . . C 2 0.742 16.517 37.498 1 33.26 ? C2 TSQ 501 B 1 HETATM 7 C C3 TSQ . . . C 2 3.137 18.006 36.027 1 40.17 ? C3 TSQ 501 B 1 HETATM 8 C CZ TSQ . . . C 2 3.02 15.124 36.221 1 48.98 ? CZ TSQ 501 B 1 HETATM 9 C CE1 TSQ . . . C 2 3.07 14.464 37.413 1 45.08 ? CE1 TSQ 501 B 1 HETATM 10 C CD1 TSQ . . . C 2 3.892 13.388 37.563 1 41.14 ? CD1 TSQ 501 B 1 HETATM 11 C CG TSQ . . . C 2 4.679 12.919 36.586 1 41.75 ? CG TSQ 501 B 1 HETATM 12 C CD2 TSQ . . . C 2 4.655 13.579 35.414 1 45.09 ? CD2 TSQ 501 B 1 HETATM 13 N N TSQ . . . C 2 4.738 9.881 35.525 1 38.96 ? N TSQ 501 B 1 HETATM 14 O O TSQ . . . C 2 6.806 8.459 36.357 1 44.21 ? O TSQ 501 B 1 HETATM 15 O OXT TSQ . . . C 2 8.119 10.137 36.747 1 33.7 -1 OXT TSQ 501 B 1 HETATM 16 SI SI1 TSQ . . . C 2 1.895 16.618 36.042 1 56.65 ? SI1 TSQ 501 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 264 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 16 #