data_7CKZ
#
_model_server_result.job_id            NCFNn4Ok0z5TeY8oa5Dolw 
_model_server_result.datetime_utc      '2025-07-31 10:07:34' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7ckz 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":502}' 
#
_entry.id    7CKZ 
#
_exptl.entry_id    7CKZ 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              153.178 
_entity.id                          7 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            L-DOPAMINE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7CKZ 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7CKZ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      7 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 D SG CYS 44 N CYS 22 1_555 D SG CYS 118 N CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf2 D SG CYS 121 N CYS 99 1_555 D SG CYS 129 N CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf3 E SG CYS 96 R CYS 96 1_555 E SG CYS 186 R CYS 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? 
disulf ? disulf4 E SG CYS 298 R CYS 298 1_555 E SG CYS 307 R CYS 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
#
_chem_comp.formula           'C8 H11 N O2' 
_chem_comp.formula_weight    153.178 
_chem_comp.id                LDP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              L-DOPAMINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     DOPAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C7 C1 LDP sing 309 n n 
C7 C8 LDP sing 310 n n 
C7 H71 LDP sing 311 n n 
C7 H72 LDP sing 312 n n 
C1 C2 LDP doub 313 n y 
C1 C6 LDP sing 314 n y 
C4 C5 LDP sing 315 n y 
C4 C3 LDP doub 316 n y 
C4 O2 LDP sing 317 n n 
C2 C3 LDP sing 318 n y 
C2 H2 LDP sing 319 n n 
C6 C5 LDP doub 320 n y 
C6 H6 LDP sing 321 n n 
C5 H5 LDP sing 322 n n 
C3 O1 LDP sing 323 n n 
O1 HO1 LDP sing 324 n n 
O2 HO2 LDP sing 325 n n 
C8 N1 LDP sing 326 n n 
C8 H81 LDP sing 327 n n 
C8 H82 LDP sing 328 n n 
N1 HN11 LDP sing 329 n n 
N1 HN12 LDP sing 330 n n 
#
_atom_sites.entry_id                     7CKZ 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 6 CLR R 1 501 1 CLR CLR . 
G 7 LDP R 1 502 1 LDP LIG . 
H 8 G4C R 1 503 1 G4C LYO . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C7 LDP . . . G 7 2.946 -3.202 -22.351 1 44.94 ? C7 LDP 502 R 1 
HETATM 2 C C1 LDP . . . G 7 3.799 -2.062 -21.811 1 44.94 ? C1 LDP 502 R 1 
HETATM 3 C C4 LDP . . . G 7 5.333 -0.006 -20.798 1 44.94 ? C4 LDP 502 R 1 
HETATM 4 C C2 LDP . . . G 7 4.556 -1.285 -22.666 1 44.94 ? C2 LDP 502 R 1 
HETATM 5 C C6 LDP . . . G 7 3.808 -1.814 -20.453 1 44.94 ? C6 LDP 502 R 1 
HETATM 6 C C5 LDP . . . G 7 4.575 -0.785 -19.946 1 44.94 ? C5 LDP 502 R 1 
HETATM 7 C C3 LDP . . . G 7 5.324 -0.256 -22.155 1 44.94 ? C3 LDP 502 R 1 
HETATM 8 O O1 LDP . . . G 7 6.096 0.537 -23.007 1 44.94 ? O1 LDP 502 R 1 
HETATM 9 O O2 LDP . . . G 7 6.11 1.035 -20.285 1 44.94 ? O2 LDP 502 R 1 
HETATM 10 C C8 LDP . . . G 7 2.736 -4.276 -21.291 1 44.94 ? C8 LDP 502 R 1 
HETATM 11 N N1 LDP . . . G 7 1.384 -4.796 -21.363 1 44.94 ? N1 LDP 502 R 1 
#
_model_server_stats.io_time_ms              57 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           279 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           11 
#