data_7CKZ # _model_server_result.job_id H5FV0U180_qXBB8MqVuazw _model_server_result.datetime_utc '2024-11-23 09:47:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ckz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":503}' # _entry.id 7CKZ # _exptl.entry_id 7CKZ _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 450.398 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[2,6-bis(chloranyl)phenyl]-1-[(1S,3R)-3-(hydroxymethyl)-1-methyl-5-(3-methyl-3-oxidanyl-butyl)-3,4-dihydro-1H-isoquinolin-2-yl]ethanone _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7CKZ _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7CKZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 8 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 D SG CYS 44 N CYS 22 1_555 D SG CYS 118 N CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf2 D SG CYS 121 N CYS 99 1_555 D SG CYS 129 N CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf3 E SG CYS 96 R CYS 96 1_555 E SG CYS 186 R CYS 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? disulf ? disulf4 E SG CYS 298 R CYS 298 1_555 E SG CYS 307 R CYS 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? # _chem_comp.formula 'C24 H29 Cl2 N O3' _chem_comp.formula_weight 450.398 _chem_comp.id G4C _chem_comp.mon_nstd_flag . _chem_comp.name 2-[2,6-bis(chloranyl)phenyl]-1-[(1S,3R)-3-(hydroxymethyl)-1-methyl-5-(3-methyl-3-oxidanyl-butyl)-3,4-dihydro-1H-isoquinolin-2-yl]ethanone _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C26 C23 G4C sing 160 n n C24 C23 G4C sing 161 n n O25 C23 G4C sing 162 n n C23 C22 G4C sing 163 n n C22 C21 G4C sing 164 n n C21 C20 G4C sing 165 n n C20 C27 G4C doub 166 n y C20 C19 G4C sing 167 n y C27 C28 G4C sing 168 n y C30 C19 G4C sing 169 n n C30 C03 G4C sing 170 n n C19 C18 G4C doub 171 n y C17 C16 G4C sing 172 n n C28 C29 G4C doub 173 n y C18 C29 G4C sing 174 n y C18 C16 G4C sing 175 n n C03 N04 G4C sing 176 n n C03 C02 G4C sing 177 n n C16 N04 G4C sing 178 n n N04 C05 G4C sing 179 n n CL9 C08 G4C sing 180 n n C02 O01 G4C sing 181 n n C05 O15 G4C doub 182 n n C05 C06 G4C sing 183 n n C06 C07 G4C sing 184 n n C08 C07 G4C doub 185 n y C08 C10 G4C sing 186 n y C07 C13 G4C sing 187 n y C10 C11 G4C doub 188 n y C13 CL4 G4C sing 189 n n C13 C12 G4C doub 190 n y C11 C12 G4C sing 191 n y C10 H1 G4C sing 192 n n C12 H2 G4C sing 193 n n C02 H3 G4C sing 194 n n C02 H4 G4C sing 195 n n C03 H5 G4C sing 196 n n C06 H6 G4C sing 197 n n C06 H7 G4C sing 198 n n C11 H8 G4C sing 199 n n C16 H9 G4C sing 200 n n C17 H10 G4C sing 201 n n C17 H11 G4C sing 202 n n C17 H12 G4C sing 203 n n C21 H13 G4C sing 204 n n C21 H14 G4C sing 205 n n C22 H15 G4C sing 206 n n C22 H16 G4C sing 207 n n C24 H17 G4C sing 208 n n C24 H18 G4C sing 209 n n C24 H19 G4C sing 210 n n C26 H20 G4C sing 211 n n C26 H21 G4C sing 212 n n C26 H22 G4C sing 213 n n C27 H23 G4C sing 214 n n C28 H24 G4C sing 215 n n C29 H25 G4C sing 216 n n C30 H26 G4C sing 217 n n C30 H27 G4C sing 218 n n O01 H28 G4C sing 219 n n O25 H29 G4C sing 220 n n # _atom_sites.entry_id 7CKZ _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 6 CLR R 1 501 1 CLR CLR . G 7 LDP R 1 502 1 LDP LIG . H 8 G4C R 1 503 1 G4C LYO . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 G4C . . . H 8 12.965 18.188 -2.012 1 30 ? C10 G4C 503 R 1 HETATM 2 C C12 G4C . . . H 8 10.931 17.482 -0.936 1 30 ? C12 G4C 503 R 1 HETATM 3 C C02 G4C . . . H 8 8.771 14.494 -5.214 1 30 ? C02 G4C 503 R 1 HETATM 4 C C03 G4C . . . H 8 9.417 13.103 -5.069 1 30 ? C03 G4C 503 R 1 HETATM 5 C C05 G4C . . . H 8 11.62 14.308 -4.149 1 30 ? C05 G4C 503 R 1 HETATM 6 C C06 G4C . . . H 8 11.162 15.762 -4.335 1 30 ? C06 G4C 503 R 1 HETATM 7 C C07 G4C . . . H 8 11.496 16.641 -3.121 1 30 ? C07 G4C 503 R 1 HETATM 8 C C08 G4C . . . H 8 12.662 17.392 -3.109 1 30 ? C08 G4C 503 R 1 HETATM 9 C C11 G4C . . . H 8 12.097 18.233 -0.924 1 30 ? C11 G4C 503 R 1 HETATM 10 C C13 G4C . . . H 8 10.628 16.686 -2.033 1 30 ? C13 G4C 503 R 1 HETATM 11 C C18 G4C . . . H 8 11.002 10.764 -5.458 1 30 ? C18 G4C 503 R 1 HETATM 12 O O15 G4C . . . H 8 12.702 14.118 -3.701 1 30 ? O15 G4C 503 R 1 HETATM 13 C C16 G4C . . . H 8 11.337 11.779 -4.276 1 30 ? C16 G4C 503 R 1 HETATM 14 C C17 G4C . . . H 8 10.768 11.233 -2.999 1 30 ? C17 G4C 503 R 1 HETATM 15 C C19 G4C . . . H 8 10.1 11.088 -6.431 1 30 ? C19 G4C 503 R 1 HETATM 16 C C20 G4C . . . H 8 9.813 10.16 -7.485 1 30 ? C20 G4C 503 R 1 HETATM 17 C C21 G4C . . . H 8 8.792 10.529 -8.586 1 30 ? C21 G4C 503 R 1 HETATM 18 C C22 G4C . . . H 8 7.893 9.339 -8.972 1 30 ? C22 G4C 503 R 1 HETATM 19 C C23 G4C . . . H 8 8.593 8.364 -9.931 1 30 ? C23 G4C 503 R 1 HETATM 20 C C24 G4C . . . H 8 9.955 8.932 -10.336 1 30 ? C24 G4C 503 R 1 HETATM 21 C C26 G4C . . . H 8 7.731 8.17 -11.178 1 30 ? C26 G4C 503 R 1 HETATM 22 C C27 G4C . . . H 8 10.452 8.93 -7.516 1 30 ? C27 G4C 503 R 1 HETATM 23 C C28 G4C . . . H 8 11.374 8.597 -6.522 1 30 ? C28 G4C 503 R 1 HETATM 24 C C29 G4C . . . H 8 11.655 9.504 -5.492 1 30 ? C29 G4C 503 R 1 HETATM 25 C C30 G4C . . . H 8 9.385 12.423 -6.425 1 30 ? C30 G4C 503 R 1 HETATM 26 N N04 G4C . . . H 8 10.795 13.128 -4.495 1 30 ? N04 G4C 503 R 1 HETATM 27 O O01 G4C . . . H 8 9.38 15.152 -6.291 1 30 ? O01 G4C 503 R 1 HETATM 28 O O25 G4C . . . H 8 8.774 7.132 -9.293 1 30 ? O25 G4C 503 R 1 HETATM 29 CL CL9 G4C . . . H 8 13.775 17.335 -4.503 1 30 ? CL9 G4C 503 R 1 HETATM 30 CL CL4 G4C . . . H 8 9.127 15.721 -2.048 1 30 ? CL4 G4C 503 R 1 # _model_server_stats.io_time_ms 110 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 226 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 30 #