data_7CMD # _model_server_result.job_id 22yAWq6AcSLpS3gLd5r02A _model_server_result.datetime_utc '2024-10-24 10:22:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7cmd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":602}' # _entry.id 7CMD # _exptl.entry_id 7CMD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 9 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.06 _cell.angle_gamma 90 _cell.entry_id 7CMD _cell.length_a 60.467 _cell.length_b 123.51 _cell.length_c 146.814 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7CMD _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,G,R 1 1 B,H,I,J,K,L,S 2 1 C,M,N,T 3 1 D,O,P,Q,U 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 G N N ? 3 H N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 N N N ? 3 P N N ? 3 Q N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 190 A CYS 189 1_555 F ZN ZN . A ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.591 ? metalc ? metalc2 A SG CYS 193 A CYS 192 1_555 F ZN ZN . A ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.607 ? metalc ? metalc3 B OD1 ASP 165 B ASP 164 1_555 J ZN ZN . B ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.62 ? metalc ? metalc4 B SG CYS 190 B CYS 189 1_555 H ZN ZN . B ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.69 ? metalc ? metalc5 B OG1 THR 192 B THR 191 1_555 H ZN ZN . B ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc6 B SG CYS 193 B CYS 192 1_555 H ZN ZN . B ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? metalc ? metalc7 C SG CYS 190 C CYS 189 1_555 N ZN ZN . C ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.767 ? metalc ? metalc8 D SG CYS 190 D CYS 189 1_555 P ZN ZN . D ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.837 ? metalc ? metalc9 D SG CYS 193 D CYS 192 1_555 P ZN ZN . D ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7CMD _atom_sites.fract_transf_matrix[1][1] 0.016538 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000016 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008097 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006811 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 TTT A 1 601 601 TTT TTT . F 3 ZN A 1 602 2 ZN ZN . G 3 ZN A 1 603 8 ZN ZN . H 3 ZN B 1 501 501 ZN ZN . I 2 TTT B 1 502 601 TTT TTT . J 3 ZN B 1 503 3 ZN ZN . K 3 ZN B 1 504 6 ZN ZN . L 3 ZN B 1 505 9 ZN ZN . M 2 TTT C 1 601 601 TTT TTT . N 3 ZN C 1 602 10 ZN ZN . O 2 TTT D 1 601 601 TTT TTT . P 3 ZN D 1 602 1 ZN ZN . Q 3 ZN D 1 603 12 ZN ZN . R 4 HOH A 1 701 86 HOH HOH . R 4 HOH A 2 702 202 HOH HOH . R 4 HOH A 3 703 7 HOH HOH . R 4 HOH A 4 704 154 HOH HOH . R 4 HOH A 5 705 146 HOH HOH . R 4 HOH A 6 706 13 HOH HOH . R 4 HOH A 7 707 178 HOH HOH . R 4 HOH A 8 708 107 HOH HOH . R 4 HOH A 9 709 44 HOH HOH . R 4 HOH A 10 710 11 HOH HOH . R 4 HOH A 11 711 117 HOH HOH . R 4 HOH A 12 712 111 HOH HOH . R 4 HOH A 13 713 30 HOH HOH . R 4 HOH A 14 714 131 HOH HOH . R 4 HOH A 15 715 43 HOH HOH . R 4 HOH A 16 716 170 HOH HOH . R 4 HOH A 17 717 83 HOH HOH . R 4 HOH A 18 718 23 HOH HOH . R 4 HOH A 19 719 182 HOH HOH . R 4 HOH A 20 720 124 HOH HOH . R 4 HOH A 21 721 84 HOH HOH . R 4 HOH A 22 722 65 HOH HOH . R 4 HOH A 23 723 158 HOH HOH . R 4 HOH A 24 724 66 HOH HOH . R 4 HOH A 25 725 97 HOH HOH . R 4 HOH A 26 726 136 HOH HOH . R 4 HOH A 27 727 153 HOH HOH . R 4 HOH A 28 728 20 HOH HOH . R 4 HOH A 29 729 148 HOH HOH . R 4 HOH A 30 730 193 HOH HOH . R 4 HOH A 31 731 95 HOH HOH . R 4 HOH A 32 732 18 HOH HOH . R 4 HOH A 33 733 110 HOH HOH . R 4 HOH A 34 734 140 HOH HOH . R 4 HOH A 35 735 160 HOH HOH . R 4 HOH A 36 736 91 HOH HOH . R 4 HOH A 37 737 67 HOH HOH . R 4 HOH A 38 738 90 HOH HOH . R 4 HOH A 39 739 147 HOH HOH . R 4 HOH A 40 740 177 HOH HOH . R 4 HOH A 41 741 141 HOH HOH . R 4 HOH A 42 742 175 HOH HOH . R 4 HOH A 43 743 176 HOH HOH . R 4 HOH A 44 744 126 HOH HOH . R 4 HOH A 45 745 38 HOH HOH . R 4 HOH A 46 746 171 HOH HOH . R 4 HOH A 47 747 199 HOH HOH . R 4 HOH A 48 748 143 HOH HOH . R 4 HOH A 49 749 152 HOH HOH . S 4 HOH B 1 601 112 HOH HOH . S 4 HOH B 2 602 49 HOH HOH . S 4 HOH B 3 603 12 HOH HOH . S 4 HOH B 4 604 42 HOH HOH . S 4 HOH B 5 605 8 HOH HOH . S 4 HOH B 6 606 102 HOH HOH . S 4 HOH B 7 607 157 HOH HOH . S 4 HOH B 8 608 103 HOH HOH . S 4 HOH B 9 609 174 HOH HOH . S 4 HOH B 10 610 10 HOH HOH . S 4 HOH B 11 611 55 HOH HOH . S 4 HOH B 12 612 167 HOH HOH . S 4 HOH B 13 613 169 HOH HOH . S 4 HOH B 14 614 73 HOH HOH . S 4 HOH B 15 615 105 HOH HOH . S 4 HOH B 16 616 9 HOH HOH . S 4 HOH B 17 617 5 HOH HOH . S 4 HOH B 18 618 53 HOH HOH . S 4 HOH B 19 619 68 HOH HOH . S 4 HOH B 20 620 194 HOH HOH . S 4 HOH B 21 621 71 HOH HOH . S 4 HOH B 22 622 27 HOH HOH . S 4 HOH B 23 623 85 HOH HOH . S 4 HOH B 24 624 94 HOH HOH . S 4 HOH B 25 625 173 HOH HOH . S 4 HOH B 26 626 163 HOH HOH . S 4 HOH B 27 627 116 HOH HOH . S 4 HOH B 28 628 99 HOH HOH . S 4 HOH B 29 629 3 HOH HOH . S 4 HOH B 30 630 60 HOH HOH . S 4 HOH B 31 631 41 HOH HOH . S 4 HOH B 32 632 57 HOH HOH . S 4 HOH B 33 633 96 HOH HOH . S 4 HOH B 34 634 150 HOH HOH . S 4 HOH B 35 635 19 HOH HOH . S 4 HOH B 36 636 54 HOH HOH . S 4 HOH B 37 637 69 HOH HOH . S 4 HOH B 38 638 4 HOH HOH . S 4 HOH B 39 639 128 HOH HOH . S 4 HOH B 40 640 181 HOH HOH . S 4 HOH B 41 641 165 HOH HOH . S 4 HOH B 42 642 132 HOH HOH . S 4 HOH B 43 643 162 HOH HOH . S 4 HOH B 44 644 46 HOH HOH . S 4 HOH B 45 645 106 HOH HOH . S 4 HOH B 46 646 89 HOH HOH . S 4 HOH B 47 647 168 HOH HOH . S 4 HOH B 48 648 201 HOH HOH . S 4 HOH B 49 649 138 HOH HOH . S 4 HOH B 50 650 156 HOH HOH . S 4 HOH B 51 651 159 HOH HOH . T 4 HOH C 1 701 2 HOH HOH . T 4 HOH C 2 702 40 HOH HOH . T 4 HOH C 3 703 196 HOH HOH . T 4 HOH C 4 704 184 HOH HOH . T 4 HOH C 5 705 61 HOH HOH . T 4 HOH C 6 706 198 HOH HOH . T 4 HOH C 7 707 137 HOH HOH . T 4 HOH C 8 708 130 HOH HOH . T 4 HOH C 9 709 1 HOH HOH . T 4 HOH C 10 710 51 HOH HOH . T 4 HOH C 11 711 52 HOH HOH . T 4 HOH C 12 712 79 HOH HOH . T 4 HOH C 13 713 50 HOH HOH . T 4 HOH C 14 714 34 HOH HOH . T 4 HOH C 15 715 36 HOH HOH . T 4 HOH C 16 716 62 HOH HOH . T 4 HOH C 17 717 82 HOH HOH . T 4 HOH C 18 718 78 HOH HOH . T 4 HOH C 19 719 15 HOH HOH . T 4 HOH C 20 720 139 HOH HOH . T 4 HOH C 21 721 39 HOH HOH . T 4 HOH C 22 722 6 HOH HOH . T 4 HOH C 23 723 17 HOH HOH . T 4 HOH C 24 724 45 HOH HOH . T 4 HOH C 25 725 100 HOH HOH . T 4 HOH C 26 726 115 HOH HOH . T 4 HOH C 27 727 88 HOH HOH . T 4 HOH C 28 728 22 HOH HOH . T 4 HOH C 29 729 72 HOH HOH . T 4 HOH C 30 730 33 HOH HOH . T 4 HOH C 31 731 32 HOH HOH . T 4 HOH C 32 732 155 HOH HOH . T 4 HOH C 33 733 64 HOH HOH . T 4 HOH C 34 734 149 HOH HOH . T 4 HOH C 35 735 145 HOH HOH . T 4 HOH C 36 736 47 HOH HOH . T 4 HOH C 37 737 135 HOH HOH . T 4 HOH C 38 738 125 HOH HOH . T 4 HOH C 39 739 172 HOH HOH . T 4 HOH C 40 740 58 HOH HOH . T 4 HOH C 41 741 101 HOH HOH . T 4 HOH C 42 742 120 HOH HOH . U 4 HOH D 1 701 166 HOH HOH . U 4 HOH D 2 702 98 HOH HOH . U 4 HOH D 3 703 25 HOH HOH . U 4 HOH D 4 704 186 HOH HOH . U 4 HOH D 5 705 189 HOH HOH . U 4 HOH D 6 706 122 HOH HOH . U 4 HOH D 7 707 180 HOH HOH . U 4 HOH D 8 708 35 HOH HOH . U 4 HOH D 9 709 191 HOH HOH . U 4 HOH D 10 710 179 HOH HOH . U 4 HOH D 11 711 92 HOH HOH . U 4 HOH D 12 712 28 HOH HOH . U 4 HOH D 13 713 29 HOH HOH . U 4 HOH D 14 714 48 HOH HOH . U 4 HOH D 15 715 37 HOH HOH . U 4 HOH D 16 716 59 HOH HOH . U 4 HOH D 17 717 134 HOH HOH . U 4 HOH D 18 718 200 HOH HOH . U 4 HOH D 19 719 93 HOH HOH . U 4 HOH D 20 720 77 HOH HOH . U 4 HOH D 21 721 56 HOH HOH . U 4 HOH D 22 722 188 HOH HOH . U 4 HOH D 23 723 16 HOH HOH . U 4 HOH D 24 724 183 HOH HOH . U 4 HOH D 25 725 21 HOH HOH . U 4 HOH D 26 726 127 HOH HOH . U 4 HOH D 27 727 24 HOH HOH . U 4 HOH D 28 728 192 HOH HOH . U 4 HOH D 29 729 14 HOH HOH . U 4 HOH D 30 730 26 HOH HOH . U 4 HOH D 31 731 118 HOH HOH . U 4 HOH D 32 732 123 HOH HOH . U 4 HOH D 33 733 75 HOH HOH . U 4 HOH D 34 734 114 HOH HOH . U 4 HOH D 35 735 31 HOH HOH . U 4 HOH D 36 736 142 HOH HOH . U 4 HOH D 37 737 80 HOH HOH . U 4 HOH D 38 738 121 HOH HOH . U 4 HOH D 39 739 63 HOH HOH . U 4 HOH D 40 740 113 HOH HOH . U 4 HOH D 41 741 81 HOH HOH . U 4 HOH D 42 742 187 HOH HOH . U 4 HOH D 43 743 164 HOH HOH . U 4 HOH D 44 744 104 HOH HOH . U 4 HOH D 45 745 108 HOH HOH . U 4 HOH D 46 746 109 HOH HOH . U 4 HOH D 47 747 161 HOH HOH . U 4 HOH D 48 748 87 HOH HOH . U 4 HOH D 49 749 76 HOH HOH . U 4 HOH D 50 750 195 HOH HOH . U 4 HOH D 51 751 70 HOH HOH . U 4 HOH D 52 752 151 HOH HOH . U 4 HOH D 53 753 197 HOH HOH . U 4 HOH D 54 754 119 HOH HOH . U 4 HOH D 55 755 190 HOH HOH . U 4 HOH D 56 756 133 HOH HOH . U 4 HOH D 57 757 129 HOH HOH . U 4 HOH D 58 758 74 HOH HOH . U 4 HOH D 59 759 144 HOH HOH . U 4 HOH D 60 760 185 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id P _atom_site.label_entity_id 3 _atom_site.Cartn_x -36.019 _atom_site.Cartn_y -51.385 _atom_site.Cartn_z 25.432 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 169.99 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 602 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 36 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #