data_7CNM # _model_server_result.job_id 1YoZGpk_mGLYOZhZltaOZA _model_server_result.datetime_utc '2024-12-12 12:33:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7cnm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"S","auth_seq_id":501}' # _entry.id 7CNM # _exptl.entry_id 7CNM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7CNM _cell.length_a 105.127 _cell.length_b 155.022 _cell.length_c 186.278 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7CNM _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,V,W,X,Y,Z 1 1 F,U,AA 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_747 -x+2,y-1/2,-z+5/2 -1 0 0 0 1 0 0 0 -1 210.254 -77.511 465.695 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 8 J N N ? 8 S N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.613 ? metalc ? metalc2 A OD2 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.565 ? metalc ? metalc3 A O THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.427 ? metalc ? metalc4 A OG1 THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.775 ? metalc ? metalc5 A O GLY 44 A GLY 44 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc6 A OE1 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.743 ? metalc ? metalc7 A OE2 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.637 ? metalc ? metalc8 G O1G GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.139 ? metalc ? metalc9 G O1B GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? metalc ? metalc10 J O1B GDP . B GDP 501 1_555 K MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.76 ? metalc ? metalc11 C OD1 ASP 39 C ASP 39 1_555 Q CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.598 ? metalc ? metalc12 C OD2 ASP 39 C ASP 39 1_555 Q CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.554 ? metalc ? metalc13 C O THR 41 C THR 41 1_555 Q CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc14 C OG1 THR 41 C THR 41 1_555 Q CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.51 ? metalc ? metalc15 C O GLY 44 C GLY 44 1_555 Q CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.438 ? metalc ? metalc16 C OE1 GLU 55 C GLU 55 1_555 Q CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.536 ? metalc ? metalc17 C OE2 GLU 55 C GLU 55 1_555 Q CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.531 ? metalc ? metalc18 O O3G GTP . C GTP 501 1_555 P MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? metalc ? metalc19 O O1B GTP . C GTP 501 1_555 P MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 247 n n PB O2B GDP sing 248 n n PB O3B GDP sing 249 n n PB O3A GDP sing 250 n n O2B HOB2 GDP sing 251 n n O3B HOB3 GDP sing 252 n n O3A PA GDP sing 253 n n PA O1A GDP doub 254 n n PA O2A GDP sing 255 n n PA O5' GDP sing 256 n n O2A HOA2 GDP sing 257 n n O5' C5' GDP sing 258 n n C5' C4' GDP sing 259 n n C5' H5' GDP sing 260 n n C5' "H5''" GDP sing 261 n n C4' O4' GDP sing 262 n n C4' C3' GDP sing 263 n n C4' H4' GDP sing 264 n n O4' C1' GDP sing 265 n n C3' O3' GDP sing 266 n n C3' C2' GDP sing 267 n n C3' H3' GDP sing 268 n n O3' HO3' GDP sing 269 n n C2' O2' GDP sing 270 n n C2' C1' GDP sing 271 n n C2' H2' GDP sing 272 n n O2' HO2' GDP sing 273 n n C1' N9 GDP sing 274 n n C1' H1' GDP sing 275 n n N9 C8 GDP sing 276 n y N9 C4 GDP sing 277 n y C8 N7 GDP doub 278 n y C8 H8 GDP sing 279 n n N7 C5 GDP sing 280 n y C5 C6 GDP sing 281 n n C5 C4 GDP doub 282 n y C6 O6 GDP doub 283 n n C6 N1 GDP sing 284 n n N1 C2 GDP sing 285 n n N1 HN1 GDP sing 286 n n C2 N2 GDP sing 287 n n C2 N3 GDP doub 288 n n N2 HN21 GDP sing 289 n n N2 HN22 GDP sing 290 n n N3 C4 GDP sing 291 n n # _atom_sites.entry_id 7CNM _atom_sites.fract_transf_matrix[1][1] 0.009512 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006451 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005368 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 5 GTP A 1 501 501 GTP GTP . H 6 MG A 1 502 502 MG MG . I 7 CA A 1 503 503 CA CA . J 8 GDP B 1 501 501 GDP GDP . K 6 MG B 1 502 502 MG MG . L 9 MES B 1 503 505 MES MES . M 9 MES B 1 504 506 MES MES . N 10 G70 B 1 505 1 G70 YXD . O 5 GTP C 1 501 501 GTP GTP . P 6 MG C 1 502 502 MG MG . Q 7 CA C 1 503 504 CA CA . R 9 MES C 1 504 505 MES MES . S 8 GDP D 1 501 501 GDP GDP . T 10 G70 D 1 502 2 G70 YXD . U 11 ACP F 1 401 401 ACP ACP . V 12 HOH A 1 601 1127 HOH HOH . V 12 HOH A 2 602 1068 HOH HOH . V 12 HOH A 3 603 1083 HOH HOH . V 12 HOH A 4 604 1276 HOH HOH . V 12 HOH A 5 605 1031 HOH HOH . V 12 HOH A 6 606 1086 HOH HOH . V 12 HOH A 7 607 1039 HOH HOH . V 12 HOH A 8 608 1030 HOH HOH . V 12 HOH A 9 609 1029 HOH HOH . V 12 HOH A 10 610 1071 HOH HOH . V 12 HOH A 11 611 1081 HOH HOH . V 12 HOH A 12 612 1038 HOH HOH . V 12 HOH A 13 613 1066 HOH HOH . V 12 HOH A 14 614 1024 HOH HOH . V 12 HOH A 15 615 1074 HOH HOH . V 12 HOH A 16 616 1037 HOH HOH . V 12 HOH A 17 617 1284 HOH HOH . V 12 HOH A 18 618 1022 HOH HOH . V 12 HOH A 19 619 1295 HOH HOH . V 12 HOH A 20 620 1073 HOH HOH . V 12 HOH A 21 621 1077 HOH HOH . V 12 HOH A 22 622 1269 HOH HOH . V 12 HOH A 23 623 1079 HOH HOH . V 12 HOH A 24 624 1078 HOH HOH . V 12 HOH A 25 625 1080 HOH HOH . V 12 HOH A 26 626 1075 HOH HOH . V 12 HOH A 27 627 1183 HOH HOH . V 12 HOH A 28 628 1090 HOH HOH . V 12 HOH A 29 629 1067 HOH HOH . V 12 HOH A 30 630 1062 HOH HOH . V 12 HOH A 31 631 1085 HOH HOH . V 12 HOH A 32 632 1035 HOH HOH . V 12 HOH A 33 633 1088 HOH HOH . V 12 HOH A 34 634 1054 HOH HOH . V 12 HOH A 35 635 1041 HOH HOH . V 12 HOH A 36 636 1052 HOH HOH . V 12 HOH A 37 637 1047 HOH HOH . V 12 HOH A 38 638 1064 HOH HOH . V 12 HOH A 39 639 1070 HOH HOH . V 12 HOH A 40 640 1069 HOH HOH . V 12 HOH A 41 641 1046 HOH HOH . V 12 HOH A 42 642 1025 HOH HOH . V 12 HOH A 43 643 1050 HOH HOH . V 12 HOH A 44 644 1076 HOH HOH . V 12 HOH A 45 645 1044 HOH HOH . V 12 HOH A 46 646 1063 HOH HOH . V 12 HOH A 47 647 1048 HOH HOH . V 12 HOH A 48 648 1065 HOH HOH . V 12 HOH A 49 649 1271 HOH HOH . V 12 HOH A 50 650 1082 HOH HOH . V 12 HOH A 51 651 1021 HOH HOH . V 12 HOH A 52 652 1299 HOH HOH . V 12 HOH A 53 653 1274 HOH HOH . V 12 HOH A 54 654 1053 HOH HOH . V 12 HOH A 55 655 1093 HOH HOH . V 12 HOH A 56 656 1055 HOH HOH . V 12 HOH A 57 657 1042 HOH HOH . V 12 HOH A 58 658 1061 HOH HOH . V 12 HOH A 59 659 1045 HOH HOH . V 12 HOH A 60 660 1033 HOH HOH . V 12 HOH A 61 661 1072 HOH HOH . V 12 HOH A 62 662 1273 HOH HOH . V 12 HOH A 63 663 1032 HOH HOH . V 12 HOH A 64 664 1043 HOH HOH . V 12 HOH A 65 665 1087 HOH HOH . V 12 HOH A 66 666 1023 HOH HOH . V 12 HOH A 67 667 1084 HOH HOH . V 12 HOH A 68 668 1094 HOH HOH . V 12 HOH A 69 669 1020 HOH HOH . V 12 HOH A 70 670 1028 HOH HOH . V 12 HOH A 71 671 1034 HOH HOH . V 12 HOH A 72 672 1026 HOH HOH . V 12 HOH A 73 673 1036 HOH HOH . V 12 HOH A 74 674 1197 HOH HOH . V 12 HOH A 75 675 1027 HOH HOH . V 12 HOH A 76 676 1049 HOH HOH . V 12 HOH A 77 677 1288 HOH HOH . V 12 HOH A 78 678 1294 HOH HOH . V 12 HOH A 79 679 1060 HOH HOH . W 12 HOH B 1 601 1219 HOH HOH . W 12 HOH B 2 602 1254 HOH HOH . W 12 HOH B 3 603 1249 HOH HOH . W 12 HOH B 4 604 1099 HOH HOH . W 12 HOH B 5 605 1216 HOH HOH . W 12 HOH B 6 606 1116 HOH HOH . W 12 HOH B 7 607 1103 HOH HOH . W 12 HOH B 8 608 1097 HOH HOH . W 12 HOH B 9 609 1275 HOH HOH . W 12 HOH B 10 610 1096 HOH HOH . W 12 HOH B 11 611 1112 HOH HOH . W 12 HOH B 12 612 1115 HOH HOH . W 12 HOH B 13 613 1162 HOH HOH . W 12 HOH B 14 614 1272 HOH HOH . W 12 HOH B 15 615 1277 HOH HOH . W 12 HOH B 16 616 1109 HOH HOH . W 12 HOH B 17 617 1098 HOH HOH . W 12 HOH B 18 618 1253 HOH HOH . W 12 HOH B 19 619 1104 HOH HOH . W 12 HOH B 20 620 1101 HOH HOH . W 12 HOH B 21 621 1217 HOH HOH . W 12 HOH B 22 622 1184 HOH HOH . W 12 HOH B 23 623 1095 HOH HOH . W 12 HOH B 24 624 1278 HOH HOH . W 12 HOH B 25 625 1108 HOH HOH . W 12 HOH B 26 626 1239 HOH HOH . W 12 HOH B 27 627 1194 HOH HOH . W 12 HOH B 28 628 1107 HOH HOH . W 12 HOH B 29 629 1289 HOH HOH . W 12 HOH B 30 630 1059 HOH HOH . W 12 HOH B 31 631 1260 HOH HOH . W 12 HOH B 32 632 1215 HOH HOH . W 12 HOH B 33 633 1285 HOH HOH . W 12 HOH B 34 634 1283 HOH HOH . W 12 HOH B 35 635 1040 HOH HOH . W 12 HOH B 36 636 1258 HOH HOH . W 12 HOH B 37 637 1106 HOH HOH . W 12 HOH B 38 638 1114 HOH HOH . W 12 HOH B 39 639 1223 HOH HOH . W 12 HOH B 40 640 1252 HOH HOH . W 12 HOH B 41 641 1111 HOH HOH . W 12 HOH B 42 642 1100 HOH HOH . W 12 HOH B 43 643 1264 HOH HOH . W 12 HOH B 44 644 1286 HOH HOH . W 12 HOH B 45 645 1247 HOH HOH . W 12 HOH B 46 646 1240 HOH HOH . W 12 HOH B 47 647 1245 HOH HOH . W 12 HOH B 48 648 1238 HOH HOH . W 12 HOH B 49 649 1246 HOH HOH . W 12 HOH B 50 650 1102 HOH HOH . W 12 HOH B 51 651 1251 HOH HOH . W 12 HOH B 52 652 1051 HOH HOH . W 12 HOH B 53 653 1105 HOH HOH . W 12 HOH B 54 654 1255 HOH HOH . W 12 HOH B 55 655 1248 HOH HOH . W 12 HOH B 56 656 1241 HOH HOH . W 12 HOH B 57 657 1268 HOH HOH . W 12 HOH B 58 658 1231 HOH HOH . W 12 HOH B 59 659 1244 HOH HOH . W 12 HOH B 60 660 1243 HOH HOH . W 12 HOH B 61 661 1292 HOH HOH . W 12 HOH B 62 662 1250 HOH HOH . W 12 HOH B 63 663 1222 HOH HOH . W 12 HOH B 64 664 1220 HOH HOH . W 12 HOH B 65 665 1287 HOH HOH . W 12 HOH B 66 666 1261 HOH HOH . X 12 HOH C 1 601 1152 HOH HOH . X 12 HOH C 2 602 1007 HOH HOH . X 12 HOH C 3 603 1131 HOH HOH . X 12 HOH C 4 604 1120 HOH HOH . X 12 HOH C 5 605 1138 HOH HOH . X 12 HOH C 6 606 1137 HOH HOH . X 12 HOH C 7 607 1166 HOH HOH . X 12 HOH C 8 608 1129 HOH HOH . X 12 HOH C 9 609 1267 HOH HOH . X 12 HOH C 10 610 1126 HOH HOH . X 12 HOH C 11 611 1011 HOH HOH . X 12 HOH C 12 612 1140 HOH HOH . X 12 HOH C 13 613 1015 HOH HOH . X 12 HOH C 14 614 1279 HOH HOH . X 12 HOH C 15 615 1146 HOH HOH . X 12 HOH C 16 616 1300 HOH HOH . X 12 HOH C 17 617 1133 HOH HOH . X 12 HOH C 18 618 1132 HOH HOH . X 12 HOH C 19 619 1009 HOH HOH . X 12 HOH C 20 620 1281 HOH HOH . X 12 HOH C 21 621 1125 HOH HOH . X 12 HOH C 22 622 1113 HOH HOH . X 12 HOH C 23 623 1005 HOH HOH . X 12 HOH C 24 624 1298 HOH HOH . X 12 HOH C 25 625 1160 HOH HOH . X 12 HOH C 26 626 1117 HOH HOH . X 12 HOH C 27 627 1012 HOH HOH . X 12 HOH C 28 628 1228 HOH HOH . X 12 HOH C 29 629 1017 HOH HOH . X 12 HOH C 30 630 1139 HOH HOH . X 12 HOH C 31 631 1135 HOH HOH . X 12 HOH C 32 632 1168 HOH HOH . X 12 HOH C 33 633 1016 HOH HOH . X 12 HOH C 34 634 1158 HOH HOH . X 12 HOH C 35 635 1149 HOH HOH . X 12 HOH C 36 636 1159 HOH HOH . X 12 HOH C 37 637 1262 HOH HOH . X 12 HOH C 38 638 1164 HOH HOH . X 12 HOH C 39 639 1169 HOH HOH . X 12 HOH C 40 640 1155 HOH HOH . X 12 HOH C 41 641 1134 HOH HOH . X 12 HOH C 42 642 1145 HOH HOH . X 12 HOH C 43 643 1118 HOH HOH . X 12 HOH C 44 644 1161 HOH HOH . X 12 HOH C 45 645 1144 HOH HOH . X 12 HOH C 46 646 1143 HOH HOH . X 12 HOH C 47 647 1004 HOH HOH . X 12 HOH C 48 648 1010 HOH HOH . X 12 HOH C 49 649 1003 HOH HOH . X 12 HOH C 50 650 1018 HOH HOH . X 12 HOH C 51 651 1141 HOH HOH . X 12 HOH C 52 652 1282 HOH HOH . X 12 HOH C 53 653 1124 HOH HOH . X 12 HOH C 54 654 1013 HOH HOH . X 12 HOH C 55 655 1154 HOH HOH . X 12 HOH C 56 656 1142 HOH HOH . X 12 HOH C 57 657 1232 HOH HOH . X 12 HOH C 58 658 1006 HOH HOH . X 12 HOH C 59 659 1002 HOH HOH . X 12 HOH C 60 660 1119 HOH HOH . X 12 HOH C 61 661 1147 HOH HOH . X 12 HOH C 62 662 1153 HOH HOH . X 12 HOH C 63 663 1150 HOH HOH . X 12 HOH C 64 664 1156 HOH HOH . X 12 HOH C 65 665 1186 HOH HOH . X 12 HOH C 66 666 1163 HOH HOH . X 12 HOH C 67 667 1297 HOH HOH . X 12 HOH C 68 668 1233 HOH HOH . X 12 HOH C 69 669 1225 HOH HOH . X 12 HOH C 70 670 1234 HOH HOH . X 12 HOH C 71 671 1014 HOH HOH . X 12 HOH C 72 672 1110 HOH HOH . X 12 HOH C 73 673 1257 HOH HOH . X 12 HOH C 74 674 1224 HOH HOH . X 12 HOH C 75 675 1242 HOH HOH . X 12 HOH C 76 676 1227 HOH HOH . X 12 HOH C 77 677 1130 HOH HOH . X 12 HOH C 78 678 1167 HOH HOH . X 12 HOH C 79 679 1270 HOH HOH . X 12 HOH C 80 680 1236 HOH HOH . X 12 HOH C 81 681 1008 HOH HOH . X 12 HOH C 82 682 1157 HOH HOH . X 12 HOH C 83 683 1263 HOH HOH . X 12 HOH C 84 684 1237 HOH HOH . X 12 HOH C 85 685 1151 HOH HOH . X 12 HOH C 86 686 1128 HOH HOH . X 12 HOH C 87 687 1229 HOH HOH . X 12 HOH C 88 688 1214 HOH HOH . X 12 HOH C 89 689 1230 HOH HOH . X 12 HOH C 90 690 1221 HOH HOH . X 12 HOH C 91 691 1226 HOH HOH . X 12 HOH C 92 692 1148 HOH HOH . Y 12 HOH D 1 601 1280 HOH HOH . Y 12 HOH D 2 602 1122 HOH HOH . Y 12 HOH D 3 603 1175 HOH HOH . Y 12 HOH D 4 604 1301 HOH HOH . Y 12 HOH D 5 605 1179 HOH HOH . Y 12 HOH D 6 606 1173 HOH HOH . Y 12 HOH D 7 607 1123 HOH HOH . Y 12 HOH D 8 608 1121 HOH HOH . Y 12 HOH D 9 609 1176 HOH HOH . Y 12 HOH D 10 610 1174 HOH HOH . Y 12 HOH D 11 611 1177 HOH HOH . Y 12 HOH D 12 612 1170 HOH HOH . Y 12 HOH D 13 613 1171 HOH HOH . Y 12 HOH D 14 614 1172 HOH HOH . Y 12 HOH D 15 615 1136 HOH HOH . Y 12 HOH D 16 616 1178 HOH HOH . Y 12 HOH D 17 617 1256 HOH HOH . Y 12 HOH D 18 618 1180 HOH HOH . Z 12 HOH E 1 201 1187 HOH HOH . Z 12 HOH E 2 202 1165 HOH HOH . Z 12 HOH E 3 203 1185 HOH HOH . Z 12 HOH E 4 204 1181 HOH HOH . Z 12 HOH E 5 205 1182 HOH HOH . Z 12 HOH E 6 206 1188 HOH HOH . Z 12 HOH E 7 207 1092 HOH HOH . AA 12 HOH F 1 501 1199 HOH HOH . AA 12 HOH F 2 502 1056 HOH HOH . AA 12 HOH F 3 503 1193 HOH HOH . AA 12 HOH F 4 504 1200 HOH HOH . AA 12 HOH F 5 505 1213 HOH HOH . AA 12 HOH F 6 506 1091 HOH HOH . AA 12 HOH F 7 507 1089 HOH HOH . AA 12 HOH F 8 508 1204 HOH HOH . AA 12 HOH F 9 509 1208 HOH HOH . AA 12 HOH F 10 510 1057 HOH HOH . AA 12 HOH F 11 511 1212 HOH HOH . AA 12 HOH F 12 512 1206 HOH HOH . AA 12 HOH F 13 513 1196 HOH HOH . AA 12 HOH F 14 514 1296 HOH HOH . AA 12 HOH F 15 515 1293 HOH HOH . AA 12 HOH F 16 516 1198 HOH HOH . AA 12 HOH F 17 517 1207 HOH HOH . AA 12 HOH F 18 518 1058 HOH HOH . AA 12 HOH F 19 519 1209 HOH HOH . AA 12 HOH F 20 520 1266 HOH HOH . AA 12 HOH F 21 521 1205 HOH HOH . AA 12 HOH F 22 522 1210 HOH HOH . AA 12 HOH F 23 523 1195 HOH HOH . AA 12 HOH F 24 524 1202 HOH HOH . AA 12 HOH F 25 525 1190 HOH HOH . AA 12 HOH F 26 526 1189 HOH HOH . AA 12 HOH F 27 527 1211 HOH HOH . AA 12 HOH F 28 528 1192 HOH HOH . AA 12 HOH F 29 529 1203 HOH HOH . AA 12 HOH F 30 530 1291 HOH HOH . AA 12 HOH F 31 531 1290 HOH HOH . AA 12 HOH F 32 532 1191 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . S 8 130.411 -12.452 144.26 1 41.31 ? PB GDP 501 D 1 HETATM 2 O O1B GDP . . . S 8 129.62 -11.688 143.231 1 38.58 ? O1B GDP 501 D 1 HETATM 3 O O2B GDP . . . S 8 130.781 -11.546 145.402 1 44.1 ? O2B GDP 501 D 1 HETATM 4 O O3B GDP . . . S 8 131.552 -13.338 143.75 1 44.87 ? O3B GDP 501 D 1 HETATM 5 O O3A GDP . . . S 8 129.368 -13.536 144.869 1 43 ? O3A GDP 501 D 1 HETATM 6 P PA GDP . . . S 8 127.756 -13.358 145.015 1 43.03 ? PA GDP 501 D 1 HETATM 7 O O1A GDP . . . S 8 127.015 -14.083 143.919 1 43.84 ? O1A GDP 501 D 1 HETATM 8 O O2A GDP . . . S 8 127.415 -11.903 145.247 1 40.27 ? O2A GDP 501 D 1 HETATM 9 O O5' GDP . . . S 8 127.608 -14.216 146.373 1 42.55 ? O5' GDP 501 D 1 HETATM 10 C C5' GDP . . . S 8 126.881 -15.44 146.505 1 41.88 ? C5' GDP 501 D 1 HETATM 11 C C4' GDP . . . S 8 125.948 -15.333 147.704 1 40.94 ? C4' GDP 501 D 1 HETATM 12 O O4' GDP . . . S 8 125.133 -14.182 147.546 1 39.82 ? O4' GDP 501 D 1 HETATM 13 C C3' GDP . . . S 8 124.975 -16.495 147.809 1 41.83 ? C3' GDP 501 D 1 HETATM 14 O O3' GDP . . . S 8 124.807 -16.835 149.19 1 39.33 ? O3' GDP 501 D 1 HETATM 15 C C2' GDP . . . S 8 123.686 -16 147.18 1 41.64 ? C2' GDP 501 D 1 HETATM 16 O O2' GDP . . . S 8 122.534 -16.623 147.756 1 44.7 ? O2' GDP 501 D 1 HETATM 17 C C1' GDP . . . S 8 123.747 -14.526 147.489 1 39.87 ? C1' GDP 501 D 1 HETATM 18 N N9 GDP . . . S 8 123.171 -13.595 146.504 1 38.26 ? N9 GDP 501 D 1 HETATM 19 C C8 GDP . . . S 8 123.661 -13.314 145.287 1 38.67 ? C8 GDP 501 D 1 HETATM 20 N N7 GDP . . . S 8 122.908 -12.356 144.682 1 38.63 ? N7 GDP 501 D 1 HETATM 21 C C5 GDP . . . S 8 121.934 -12.014 145.534 1 37.24 ? C5 GDP 501 D 1 HETATM 22 C C6 GDP . . . S 8 120.801 -11.074 145.533 1 38.57 ? C6 GDP 501 D 1 HETATM 23 O O6 GDP . . . S 8 120.58 -10.343 144.538 1 40.33 ? O6 GDP 501 D 1 HETATM 24 N N1 GDP . . . S 8 120.023 -11.031 146.63 1 38.56 ? N1 GDP 501 D 1 HETATM 25 C C2 GDP . . . S 8 120.23 -11.794 147.719 1 38.77 ? C2 GDP 501 D 1 HETATM 26 N N2 GDP . . . S 8 119.384 -11.668 148.772 1 38.73 ? N2 GDP 501 D 1 HETATM 27 N N3 GDP . . . S 8 121.262 -12.676 147.792 1 39.18 ? N3 GDP 501 D 1 HETATM 28 C C4 GDP . . . S 8 122.119 -12.824 146.743 1 38.29 ? C4 GDP 501 D 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 65 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 28 #