data_7CPQ # _model_server_result.job_id ubSmmhkno7qDAQhCDcu9XQ _model_server_result.datetime_utc '2025-01-10 11:01:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7cpq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":505}' # _entry.id 7CPQ # _exptl.entry_id 7CPQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.237 _entity.id 10 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7CPQ _cell.length_a 104.877 _cell.length_b 156.616 _cell.length_c 182.624 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7CPQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 10 _struct_asym.id N _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? metalc ? metalc2 A OD2 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? metalc ? metalc3 A O THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.486 ? metalc ? metalc4 A OG1 THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc5 A O GLY 44 A GLY 44 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.44 ? metalc ? metalc6 A OE1 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.124 ? metalc ? metalc7 A OE2 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? metalc ? metalc8 G O2G GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? metalc ? metalc9 G O1B GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc10 B OE1 GLU 111 B GLU 113 1_555 M CA CA . B CA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.853 ? metalc ? metalc11 B OE1 GLU 111 B GLU 113 1_555 S CA CA . C CA 505 4_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.706 ? metalc ? metalc12 B OE2 GLU 111 B GLU 113 1_555 S CA CA . C CA 505 4_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.982 ? metalc ? metalc13 K O2A GDP . B GDP 502 1_555 L MG MG . B MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.393 ? metalc ? metalc14 L MG MG . B MG 503 1_555 AA O HOH . B HOH 615 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.722 ? metalc ? metalc15 L MG MG . B MG 503 1_555 BA O HOH . C HOH 618 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.411 ? metalc ? metalc16 O O3G GTP . C GTP 501 1_555 R MG MG . C MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.628 ? metalc ? metalc17 O O1B GTP . C GTP 501 1_555 R MG MG . C MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? metalc ? metalc18 R MG MG . C MG 504 1_555 BA O HOH . C HOH 611 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? metalc ? metalc19 D OE1 GLN 11 D GLN 11 1_555 W MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc20 V O2A GDP . D GDP 501 1_555 W MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.71 ? metalc ? metalc21 F OE2 GLU 331 F GLU 331 1_555 Y MG MG . F MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.607 ? metalc ? metalc22 Y MG MG . F MG 401 1_555 EA O HOH . F HOH 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.8 ? # _chem_comp.formula 'C6 H13 N O4 S' _chem_comp.formula_weight 195.237 _chem_comp.id MES _chem_comp.mon_nstd_flag . _chem_comp.name '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 MES sing 380 n n O1 C6 MES sing 381 n n C2 C3 MES sing 382 n n C2 H21 MES sing 383 n n C2 H22 MES sing 384 n n C3 N4 MES sing 385 n n C3 H31 MES sing 386 n n C3 H32 MES sing 387 n n N4 C5 MES sing 388 n n N4 C7 MES sing 389 n n N4 HN4 MES sing 390 n n C5 C6 MES sing 391 n n C5 H51 MES sing 392 n n C5 H52 MES sing 393 n n C6 H61 MES sing 394 n n C6 H62 MES sing 395 n n C7 C8 MES sing 396 n n C7 H71 MES sing 397 n n C7 H72 MES sing 398 n n C8 S MES sing 399 n n C8 H81 MES sing 400 n n C8 H82 MES sing 401 n n S O1S MES doub 402 n n S O2S MES doub 403 n n S O3S MES sing 404 n n # _atom_sites.entry_id 7CPQ _atom_sites.fract_transf_matrix[1][1] 0.009535 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006385 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005476 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 5 GTP A 1 501 1 GTP GTP . H 6 MG A 1 502 1 MG MG . I 7 CA A 1 503 1 CA CA . J 8 G9X B 1 501 1 G9X LIG . K 9 GDP B 1 502 1 GDP GDP . L 6 MG B 1 503 3 MG MG . M 7 CA B 1 504 2 CA CA . N 10 MES B 1 505 1 MES MES . O 5 GTP C 1 501 2 GTP GTP . P 11 GOL C 1 502 1 GOL GOL . Q 11 GOL C 1 503 2 GOL GOL . R 6 MG C 1 504 2 MG MG . S 7 CA C 1 505 3 CA CA . T 12 IMD C 1 506 1 IMD IMD . U 12 IMD C 1 507 3 IMD IMD . V 9 GDP D 1 501 2 GDP GDP . W 6 MG D 1 502 4 MG MG . X 12 IMD E 1 201 2 IMD IMD . Y 6 MG F 1 401 5 MG MG . Z 13 HOH A 1 601 17 HOH HOH . Z 13 HOH A 2 602 57 HOH HOH . Z 13 HOH A 3 603 5 HOH HOH . Z 13 HOH A 4 604 32 HOH HOH . Z 13 HOH A 5 605 31 HOH HOH . Z 13 HOH A 6 606 76 HOH HOH . Z 13 HOH A 7 607 46 HOH HOH . Z 13 HOH A 8 608 12 HOH HOH . Z 13 HOH A 9 609 70 HOH HOH . Z 13 HOH A 10 610 81 HOH HOH . Z 13 HOH A 11 611 80 HOH HOH . AA 13 HOH B 1 601 50 HOH HOH . AA 13 HOH B 2 602 86 HOH HOH . AA 13 HOH B 3 603 64 HOH HOH . AA 13 HOH B 4 604 28 HOH HOH . AA 13 HOH B 5 605 6 HOH HOH . AA 13 HOH B 6 606 8 HOH HOH . AA 13 HOH B 7 607 34 HOH HOH . AA 13 HOH B 8 608 45 HOH HOH . AA 13 HOH B 9 609 74 HOH HOH . AA 13 HOH B 10 610 23 HOH HOH . AA 13 HOH B 11 611 53 HOH HOH . AA 13 HOH B 12 612 13 HOH HOH . AA 13 HOH B 13 613 65 HOH HOH . AA 13 HOH B 14 614 69 HOH HOH . AA 13 HOH B 15 615 4 HOH HOH . BA 13 HOH C 1 601 39 HOH HOH . BA 13 HOH C 2 602 9 HOH HOH . BA 13 HOH C 3 603 33 HOH HOH . BA 13 HOH C 4 604 11 HOH HOH . BA 13 HOH C 5 605 71 HOH HOH . BA 13 HOH C 6 606 41 HOH HOH . BA 13 HOH C 7 607 82 HOH HOH . BA 13 HOH C 8 608 44 HOH HOH . BA 13 HOH C 9 609 48 HOH HOH . BA 13 HOH C 10 610 52 HOH HOH . BA 13 HOH C 11 611 60 HOH HOH . BA 13 HOH C 12 612 47 HOH HOH . BA 13 HOH C 13 613 30 HOH HOH . BA 13 HOH C 14 614 58 HOH HOH . BA 13 HOH C 15 615 63 HOH HOH . BA 13 HOH C 16 616 29 HOH HOH . BA 13 HOH C 17 617 15 HOH HOH . BA 13 HOH C 18 618 21 HOH HOH . BA 13 HOH C 19 619 3 HOH HOH . BA 13 HOH C 20 620 51 HOH HOH . BA 13 HOH C 21 621 16 HOH HOH . BA 13 HOH C 22 622 78 HOH HOH . BA 13 HOH C 23 623 61 HOH HOH . BA 13 HOH C 24 624 20 HOH HOH . BA 13 HOH C 25 625 56 HOH HOH . BA 13 HOH C 26 626 7 HOH HOH . BA 13 HOH C 27 627 54 HOH HOH . BA 13 HOH C 28 628 49 HOH HOH . BA 13 HOH C 29 629 55 HOH HOH . BA 13 HOH C 30 630 72 HOH HOH . BA 13 HOH C 31 631 10 HOH HOH . BA 13 HOH C 32 632 62 HOH HOH . BA 13 HOH C 33 633 25 HOH HOH . BA 13 HOH C 34 634 37 HOH HOH . BA 13 HOH C 35 635 26 HOH HOH . BA 13 HOH C 36 636 27 HOH HOH . BA 13 HOH C 37 637 2 HOH HOH . CA 13 HOH D 1 601 24 HOH HOH . CA 13 HOH D 2 602 68 HOH HOH . DA 13 HOH E 1 301 75 HOH HOH . EA 13 HOH F 1 501 42 HOH HOH . EA 13 HOH F 2 502 84 HOH HOH . EA 13 HOH F 3 503 35 HOH HOH . EA 13 HOH F 4 504 43 HOH HOH . EA 13 HOH F 5 505 36 HOH HOH . EA 13 HOH F 6 506 67 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 MES . . . N 10 -30.336 56.652 -33.314 1 29.55 ? O1 MES 505 B 1 HETATM 2 C C2 MES . . . N 10 -30.662 56.113 -34.576 1 29.68 ? C2 MES 505 B 1 HETATM 3 C C3 MES . . . N 10 -31.073 57.131 -35.642 1 30.19 ? C3 MES 505 B 1 HETATM 4 N N4 MES . . . N 10 -31.741 58.27 -35.146 1 30.79 1 N4 MES 505 B 1 HETATM 5 C C5 MES . . . N 10 -31.05 58.817 -34.024 1 30.49 ? C5 MES 505 B 1 HETATM 6 C C6 MES . . . N 10 -31.012 57.824 -32.907 1 30.17 ? C6 MES 505 B 1 HETATM 7 C C7 MES . . . N 10 -31.892 59.24 -36.266 1 31.39 ? C7 MES 505 B 1 HETATM 8 C C8 MES . . . N 10 -31.071 60.533 -36.195 1 37.86 ? C8 MES 505 B 1 HETATM 9 S S MES . . . N 10 -31.996 61.868 -37.014 1 110.46 ? S MES 505 B 1 HETATM 10 O O1S MES . . . N 10 -33.462 61.563 -36.984 1 48.53 ? O1S MES 505 B 1 HETATM 11 O O2S MES . . . N 10 -31.688 61.913 -38.479 1 36.15 ? O2S MES 505 B 1 HETATM 12 O O3S MES . . . N 10 -31.691 63.19 -36.363 1 52.84 -1 O3S MES 505 B 1 HETATM 13 H H21 MES . . . N 10 -29.887 55.631 -34.906 1 35.62 ? H21 MES 505 B 1 HETATM 14 H H22 MES . . . N 10 -31.39 55.484 -34.458 1 35.62 ? H22 MES 505 B 1 HETATM 15 H H31 MES . . . N 10 -30.273 57.426 -36.105 1 36.23 ? H31 MES 505 B 1 HETATM 16 H H32 MES . . . N 10 -31.657 56.69 -36.278 1 36.23 ? H32 MES 505 B 1 HETATM 17 H HN4 MES . . . N 10 -32.551 58.021 -34.877 1 36.94 ? HN4 MES 505 B 1 HETATM 18 H H51 MES . . . N 10 -30.143 59.039 -34.286 1 36.59 ? H51 MES 505 B 1 HETATM 19 H H52 MES . . . N 10 -31.508 59.618 -33.724 1 36.59 ? H52 MES 505 B 1 HETATM 20 H H61 MES . . . N 10 -31.92 57.597 -32.651 1 36.21 ? H61 MES 505 B 1 HETATM 21 H H62 MES . . . N 10 -30.547 58.213 -32.15 1 36.21 ? H62 MES 505 B 1 HETATM 22 H H71 MES . . . N 10 -31.653 58.783 -37.088 1 37.67 ? H71 MES 505 B 1 HETATM 23 H H72 MES . . . N 10 -32.829 59.486 -36.322 1 37.67 ? H72 MES 505 B 1 HETATM 24 H H81 MES . . . N 10 -30.221 60.402 -36.644 1 45.43 ? H81 MES 505 B 1 HETATM 25 H H82 MES . . . N 10 -30.915 60.769 -35.267 1 45.43 ? H82 MES 505 B 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 61 _model_server_stats.create_model_time_ms 102 _model_server_stats.query_time_ms 735 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 25 #