data_7CQV # _model_server_result.job_id s-RJKEttU8_42sZTj4OqkQ _model_server_result.datetime_utc '2024-10-18 16:21:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7cqv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":102}' # _entry.id 7CQV # _exptl.entry_id 7CQV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7CQV _cell.length_a 98.449 _cell.length_b 98.449 _cell.length_c 134.263 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7CQV _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 23 E ASP 21 1_555 D CA CA . E CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? metalc ? metalc2 A OD1 ASP 25 E ASP 23 1_555 D CA CA . E CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? metalc ? metalc3 A OD1 ASP 27 E ASP 25 1_555 D CA CA . E CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? metalc ? metalc4 A O THR 29 E THR 27 1_555 D CA CA . E CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? metalc ? metalc5 A OE1 GLU 34 E GLU 32 1_555 D CA CA . E CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.593 ? metalc ? metalc6 A OE2 GLU 34 E GLU 32 1_555 D CA CA . E CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.453 ? metalc ? metalc7 A OD1 ASP 59 E ASP 57 1_555 E CA CA . E CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? metalc ? metalc8 A OD1 ASP 61 E ASP 59 1_555 E CA CA . E CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? metalc ? metalc9 A OD1 ASN 63 E ASN 61 1_555 E CA CA . E CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.401 ? metalc ? metalc10 A O THR 65 E THR 63 1_555 E CA CA . E CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc11 A OE1 GLU 70 E GLU 68 1_555 E CA CA . E CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.448 ? metalc ? metalc12 A OE2 GLU 70 E GLU 68 1_555 E CA CA . E CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.48 ? metalc ? metalc13 D CA CA . E CA 101 1_555 H O HOH . E HOH 233 10_454 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc14 E CA CA . E CA 102 1_555 H O HOH . E HOH 235 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.258 ? metalc ? metalc15 B OD1 ASP 23 A ASP 21 1_555 G CA CA . A CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? metalc ? metalc16 B OD1 ASP 25 A ASP 23 1_555 G CA CA . A CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.472 ? metalc ? metalc17 B OD1 ASP 27 A ASP 25 1_555 G CA CA . A CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? metalc ? metalc18 B O THR 29 A THR 27 1_555 G CA CA . A CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? metalc ? metalc19 B OE1 GLU 34 A GLU 32 1_555 G CA CA . A CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? metalc ? metalc20 B OE2 GLU 34 A GLU 32 1_555 G CA CA . A CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.601 ? metalc ? metalc21 B OD1 ASP 59 A ASP 57 1_555 F CA CA . A CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc22 B OD1 ASP 61 A ASP 59 1_555 F CA CA . A CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? metalc ? metalc23 B OD1 ASN 63 A ASN 61 1_555 F CA CA . A CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? metalc ? metalc24 B O THR 65 A THR 63 1_555 F CA CA . A CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? metalc ? metalc25 B OE1 GLU 70 A GLU 68 1_555 F CA CA . A CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.476 ? metalc ? metalc26 B OE2 GLU 70 A GLU 68 1_555 F CA CA . A CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.501 ? metalc ? metalc27 F CA CA . A CA 101 1_555 I O HOH . A HOH 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? metalc ? metalc28 G CA CA . A CA 102 1_555 I O HOH . A HOH 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7CQV _atom_sites.fract_transf_matrix[1][1] 0.010158 _atom_sites.fract_transf_matrix[1][2] 0.005864 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011729 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007448 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 CA E 1 101 5 CA CA . E 3 CA E 1 102 6 CA CA . F 3 CA A 1 101 7 CA CA . G 3 CA A 1 102 8 CA CA . H 4 HOH E 1 201 47 HOH HOH . H 4 HOH E 2 202 9 HOH HOH . H 4 HOH E 3 203 67 HOH HOH . H 4 HOH E 4 204 15 HOH HOH . H 4 HOH E 5 205 2 HOH HOH . H 4 HOH E 6 206 52 HOH HOH . H 4 HOH E 7 207 10 HOH HOH . H 4 HOH E 8 208 39 HOH HOH . H 4 HOH E 9 209 34 HOH HOH . H 4 HOH E 10 210 16 HOH HOH . H 4 HOH E 11 211 37 HOH HOH . H 4 HOH E 12 212 40 HOH HOH . H 4 HOH E 13 213 50 HOH HOH . H 4 HOH E 14 214 38 HOH HOH . H 4 HOH E 15 215 44 HOH HOH . H 4 HOH E 16 216 7 HOH HOH . H 4 HOH E 17 217 59 HOH HOH . H 4 HOH E 18 218 18 HOH HOH . H 4 HOH E 19 219 27 HOH HOH . H 4 HOH E 20 220 68 HOH HOH . H 4 HOH E 21 221 11 HOH HOH . H 4 HOH E 22 222 69 HOH HOH . H 4 HOH E 23 223 23 HOH HOH . H 4 HOH E 24 224 25 HOH HOH . H 4 HOH E 25 225 6 HOH HOH . H 4 HOH E 26 226 53 HOH HOH . H 4 HOH E 27 227 61 HOH HOH . H 4 HOH E 28 228 19 HOH HOH . H 4 HOH E 29 229 8 HOH HOH . H 4 HOH E 30 230 36 HOH HOH . H 4 HOH E 31 231 13 HOH HOH . H 4 HOH E 32 232 58 HOH HOH . H 4 HOH E 33 233 1 HOH HOH . H 4 HOH E 34 234 42 HOH HOH . H 4 HOH E 35 235 3 HOH HOH . H 4 HOH E 36 236 70 HOH HOH . H 4 HOH E 37 237 5 HOH HOH . H 4 HOH E 38 238 20 HOH HOH . H 4 HOH E 39 239 48 HOH HOH . H 4 HOH E 40 240 4 HOH HOH . H 4 HOH E 41 241 54 HOH HOH . H 4 HOH E 42 242 29 HOH HOH . H 4 HOH E 43 243 28 HOH HOH . H 4 HOH E 44 244 72 HOH HOH . H 4 HOH E 45 245 63 HOH HOH . H 4 HOH E 46 246 24 HOH HOH . H 4 HOH E 47 247 22 HOH HOH . H 4 HOH E 48 248 12 HOH HOH . H 4 HOH E 49 249 49 HOH HOH . H 4 HOH E 50 250 43 HOH HOH . H 4 HOH E 51 251 51 HOH HOH . H 4 HOH E 52 252 66 HOH HOH . I 4 HOH A 1 201 21 HOH HOH . I 4 HOH A 2 202 32 HOH HOH . I 4 HOH A 3 203 55 HOH HOH . I 4 HOH A 4 204 41 HOH HOH . I 4 HOH A 5 205 71 HOH HOH . I 4 HOH A 6 206 14 HOH HOH . I 4 HOH A 7 207 33 HOH HOH . I 4 HOH A 8 208 17 HOH HOH . I 4 HOH A 9 209 31 HOH HOH . I 4 HOH A 10 210 74 HOH HOH . I 4 HOH A 11 211 35 HOH HOH . I 4 HOH A 12 212 64 HOH HOH . I 4 HOH A 13 213 45 HOH HOH . I 4 HOH A 14 214 26 HOH HOH . I 4 HOH A 15 215 75 HOH HOH . I 4 HOH A 16 216 56 HOH HOH . I 4 HOH A 17 217 62 HOH HOH . I 4 HOH A 18 218 46 HOH HOH . I 4 HOH A 19 219 65 HOH HOH . J 4 HOH B 1 101 73 HOH HOH . J 4 HOH B 2 102 57 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x -14.41 _atom_site.Cartn_y 15.694 _atom_site.Cartn_z -44.648 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 14.08 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 102 _atom_site.auth_asym_id E _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #