data_7CS0 # _model_server_result.job_id R6O4ONfEJcBSmFd0-f2O1g _model_server_result.datetime_utc '2024-11-23 12:21:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7cs0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":304}' # _entry.id 7CS0 # _exptl.entry_id 7CS0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7CS0 _cell.length_a 56.374 _cell.length_b 56.374 _cell.length_c 122.866 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7CS0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 145 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ASP 54 A ASP 54 1_555 H CA CA . A CA 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.189 ? metalc ? metalc2 A OD2 ASP 59 A ASP 59 1_555 H CA CA . A CA 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? metalc ? metalc3 C O61 PAR . A PAR 301 1_555 H CA CA . A CA 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? metalc ? metalc4 H CA CA . A CA 306 1_555 N O HOH . A HOH 443 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? metalc ? metalc5 H CA CA . A CA 306 1_555 N O HOH . A HOH 498 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.939 ? metalc ? metalc6 I CA CA . A CA 307 1_555 N O HOH . A HOH 416 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.01 ? metalc ? metalc7 I CA CA . A CA 307 1_555 N O HOH . A HOH 431 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.891 ? metalc ? metalc8 I CA CA . A CA 307 1_555 N O HOH . A HOH 473 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.806 ? metalc ? metalc9 I CA CA . A CA 307 1_555 N O HOH . A HOH 494 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.737 ? metalc ? metalc10 B O ASP 54 B ASP 54 1_555 M CA CA . B CA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? metalc ? metalc11 B OD2 ASP 59 B ASP 59 1_555 M CA CA . B CA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.41 ? metalc ? metalc12 J O61 PAR . B PAR 301 1_555 M CA CA . B CA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 159 n n C1 C2 EDO sing 160 n n C1 H11 EDO sing 161 n n C1 H12 EDO sing 162 n n O1 HO1 EDO sing 163 n n C2 O2 EDO sing 164 n n C2 H21 EDO sing 165 n n C2 H22 EDO sing 166 n n O2 HO2 EDO sing 167 n n # _atom_sites.entry_id 7CS0 _atom_sites.fract_transf_matrix[1][1] 0.017739 _atom_sites.fract_transf_matrix[1][2] 0.010241 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020483 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008139 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PAR A 1 301 300 PAR PAR . D 3 COA A 1 302 401 COA COA . E 4 EDO A 1 303 501 EDO EDO . F 4 EDO A 1 304 502 EDO EDO . G 5 ACT A 1 305 601 ACT ACT . H 6 CA A 1 306 701 CA CA . I 6 CA A 1 307 702 CA CA . J 2 PAR B 1 301 300 PAR PAR . K 3 COA B 1 302 401 COA COA . L 4 EDO B 1 303 501 EDO EDO . M 6 CA B 1 304 701 CA CA . N 7 HOH A 1 401 197 HOH HOH . N 7 HOH A 2 402 248 HOH HOH . N 7 HOH A 3 403 96 HOH HOH . N 7 HOH A 4 404 24 HOH HOH . N 7 HOH A 5 405 31 HOH HOH . N 7 HOH A 6 406 180 HOH HOH . N 7 HOH A 7 407 210 HOH HOH . N 7 HOH A 8 408 46 HOH HOH . N 7 HOH A 9 409 237 HOH HOH . N 7 HOH A 10 410 20 HOH HOH . N 7 HOH A 11 411 184 HOH HOH . N 7 HOH A 12 412 164 HOH HOH . N 7 HOH A 13 413 147 HOH HOH . N 7 HOH A 14 414 79 HOH HOH . N 7 HOH A 15 415 97 HOH HOH . N 7 HOH A 16 416 68 HOH HOH . N 7 HOH A 17 417 118 HOH HOH . N 7 HOH A 18 418 88 HOH HOH . N 7 HOH A 19 419 70 HOH HOH . N 7 HOH A 20 420 77 HOH HOH . N 7 HOH A 21 421 234 HOH HOH . N 7 HOH A 22 422 141 HOH HOH . N 7 HOH A 23 423 208 HOH HOH . N 7 HOH A 24 424 42 HOH HOH . N 7 HOH A 25 425 39 HOH HOH . N 7 HOH A 26 426 8 HOH HOH . N 7 HOH A 27 427 86 HOH HOH . N 7 HOH A 28 428 133 HOH HOH . N 7 HOH A 29 429 145 HOH HOH . N 7 HOH A 30 430 217 HOH HOH . N 7 HOH A 31 431 127 HOH HOH . N 7 HOH A 32 432 21 HOH HOH . N 7 HOH A 33 433 143 HOH HOH . N 7 HOH A 34 434 170 HOH HOH . N 7 HOH A 35 435 64 HOH HOH . N 7 HOH A 36 436 229 HOH HOH . N 7 HOH A 37 437 162 HOH HOH . N 7 HOH A 38 438 157 HOH HOH . N 7 HOH A 39 439 125 HOH HOH . N 7 HOH A 40 440 115 HOH HOH . N 7 HOH A 41 441 192 HOH HOH . N 7 HOH A 42 442 11 HOH HOH . N 7 HOH A 43 443 221 HOH HOH . N 7 HOH A 44 444 57 HOH HOH . N 7 HOH A 45 445 111 HOH HOH . N 7 HOH A 46 446 224 HOH HOH . N 7 HOH A 47 447 226 HOH HOH . N 7 HOH A 48 448 245 HOH HOH . N 7 HOH A 49 449 34 HOH HOH . N 7 HOH A 50 450 30 HOH HOH . N 7 HOH A 51 451 75 HOH HOH . N 7 HOH A 52 452 139 HOH HOH . N 7 HOH A 53 453 47 HOH HOH . N 7 HOH A 54 454 95 HOH HOH . N 7 HOH A 55 455 53 HOH HOH . N 7 HOH A 56 456 119 HOH HOH . N 7 HOH A 57 457 10 HOH HOH . N 7 HOH A 58 458 12 HOH HOH . N 7 HOH A 59 459 3 HOH HOH . N 7 HOH A 60 460 60 HOH HOH . N 7 HOH A 61 461 202 HOH HOH . N 7 HOH A 62 462 187 HOH HOH . N 7 HOH A 63 463 247 HOH HOH . N 7 HOH A 64 464 6 HOH HOH . N 7 HOH A 65 465 174 HOH HOH . N 7 HOH A 66 466 41 HOH HOH . N 7 HOH A 67 467 123 HOH HOH . N 7 HOH A 68 468 160 HOH HOH . N 7 HOH A 69 469 45 HOH HOH . N 7 HOH A 70 470 120 HOH HOH . N 7 HOH A 71 471 89 HOH HOH . N 7 HOH A 72 472 138 HOH HOH . N 7 HOH A 73 473 109 HOH HOH . N 7 HOH A 74 474 7 HOH HOH . N 7 HOH A 75 475 104 HOH HOH . N 7 HOH A 76 476 121 HOH HOH . N 7 HOH A 77 477 2 HOH HOH . N 7 HOH A 78 478 67 HOH HOH . N 7 HOH A 79 479 63 HOH HOH . N 7 HOH A 80 480 117 HOH HOH . N 7 HOH A 81 481 213 HOH HOH . N 7 HOH A 82 482 105 HOH HOH . N 7 HOH A 83 483 48 HOH HOH . N 7 HOH A 84 484 62 HOH HOH . N 7 HOH A 85 485 55 HOH HOH . N 7 HOH A 86 486 17 HOH HOH . N 7 HOH A 87 487 61 HOH HOH . N 7 HOH A 88 488 137 HOH HOH . N 7 HOH A 89 489 93 HOH HOH . N 7 HOH A 90 490 28 HOH HOH . N 7 HOH A 91 491 152 HOH HOH . N 7 HOH A 92 492 33 HOH HOH . N 7 HOH A 93 493 85 HOH HOH . N 7 HOH A 94 494 92 HOH HOH . N 7 HOH A 95 495 51 HOH HOH . N 7 HOH A 96 496 183 HOH HOH . N 7 HOH A 97 497 153 HOH HOH . N 7 HOH A 98 498 205 HOH HOH . N 7 HOH A 99 499 201 HOH HOH . N 7 HOH A 100 500 190 HOH HOH . N 7 HOH A 101 501 27 HOH HOH . N 7 HOH A 102 502 181 HOH HOH . N 7 HOH A 103 503 19 HOH HOH . N 7 HOH A 104 504 169 HOH HOH . N 7 HOH A 105 505 32 HOH HOH . N 7 HOH A 106 506 238 HOH HOH . N 7 HOH A 107 507 246 HOH HOH . N 7 HOH A 108 508 110 HOH HOH . N 7 HOH A 109 509 72 HOH HOH . N 7 HOH A 110 510 91 HOH HOH . N 7 HOH A 111 511 179 HOH HOH . N 7 HOH A 112 512 165 HOH HOH . N 7 HOH A 113 513 195 HOH HOH . N 7 HOH A 114 514 239 HOH HOH . N 7 HOH A 115 515 211 HOH HOH . N 7 HOH A 116 516 131 HOH HOH . N 7 HOH A 117 517 66 HOH HOH . N 7 HOH A 118 518 135 HOH HOH . N 7 HOH A 119 519 185 HOH HOH . N 7 HOH A 120 520 161 HOH HOH . N 7 HOH A 121 521 132 HOH HOH . N 7 HOH A 122 522 228 HOH HOH . N 7 HOH A 123 523 231 HOH HOH . N 7 HOH A 124 524 178 HOH HOH . N 7 HOH A 125 525 199 HOH HOH . N 7 HOH A 126 526 242 HOH HOH . N 7 HOH A 127 527 140 HOH HOH . O 7 HOH B 1 401 220 HOH HOH . O 7 HOH B 2 402 99 HOH HOH . O 7 HOH B 3 403 116 HOH HOH . O 7 HOH B 4 404 94 HOH HOH . O 7 HOH B 5 405 129 HOH HOH . O 7 HOH B 6 406 186 HOH HOH . O 7 HOH B 7 407 240 HOH HOH . O 7 HOH B 8 408 191 HOH HOH . O 7 HOH B 9 409 171 HOH HOH . O 7 HOH B 10 410 71 HOH HOH . O 7 HOH B 11 411 227 HOH HOH . O 7 HOH B 12 412 108 HOH HOH . O 7 HOH B 13 413 37 HOH HOH . O 7 HOH B 14 414 74 HOH HOH . O 7 HOH B 15 415 58 HOH HOH . O 7 HOH B 16 416 188 HOH HOH . O 7 HOH B 17 417 214 HOH HOH . O 7 HOH B 18 418 16 HOH HOH . O 7 HOH B 19 419 25 HOH HOH . O 7 HOH B 20 420 198 HOH HOH . O 7 HOH B 21 421 49 HOH HOH . O 7 HOH B 22 422 193 HOH HOH . O 7 HOH B 23 423 151 HOH HOH . O 7 HOH B 24 424 209 HOH HOH . O 7 HOH B 25 425 168 HOH HOH . O 7 HOH B 26 426 73 HOH HOH . O 7 HOH B 27 427 194 HOH HOH . O 7 HOH B 28 428 14 HOH HOH . O 7 HOH B 29 429 29 HOH HOH . O 7 HOH B 30 430 216 HOH HOH . O 7 HOH B 31 431 83 HOH HOH . O 7 HOH B 32 432 146 HOH HOH . O 7 HOH B 33 433 50 HOH HOH . O 7 HOH B 34 434 144 HOH HOH . O 7 HOH B 35 435 215 HOH HOH . O 7 HOH B 36 436 158 HOH HOH . O 7 HOH B 37 437 65 HOH HOH . O 7 HOH B 38 438 1 HOH HOH . O 7 HOH B 39 439 40 HOH HOH . O 7 HOH B 40 440 98 HOH HOH . O 7 HOH B 41 441 175 HOH HOH . O 7 HOH B 42 442 76 HOH HOH . O 7 HOH B 43 443 204 HOH HOH . O 7 HOH B 44 444 230 HOH HOH . O 7 HOH B 45 445 124 HOH HOH . O 7 HOH B 46 446 18 HOH HOH . O 7 HOH B 47 447 59 HOH HOH . O 7 HOH B 48 448 112 HOH HOH . O 7 HOH B 49 449 82 HOH HOH . O 7 HOH B 50 450 212 HOH HOH . O 7 HOH B 51 451 22 HOH HOH . O 7 HOH B 52 452 222 HOH HOH . O 7 HOH B 53 453 43 HOH HOH . O 7 HOH B 54 454 189 HOH HOH . O 7 HOH B 55 455 13 HOH HOH . O 7 HOH B 56 456 156 HOH HOH . O 7 HOH B 57 457 155 HOH HOH . O 7 HOH B 58 458 4 HOH HOH . O 7 HOH B 59 459 56 HOH HOH . O 7 HOH B 60 460 36 HOH HOH . O 7 HOH B 61 461 35 HOH HOH . O 7 HOH B 62 462 218 HOH HOH . O 7 HOH B 63 463 106 HOH HOH . O 7 HOH B 64 464 52 HOH HOH . O 7 HOH B 65 465 167 HOH HOH . O 7 HOH B 66 466 103 HOH HOH . O 7 HOH B 67 467 23 HOH HOH . O 7 HOH B 68 468 78 HOH HOH . O 7 HOH B 69 469 149 HOH HOH . O 7 HOH B 70 470 69 HOH HOH . O 7 HOH B 71 471 5 HOH HOH . O 7 HOH B 72 472 114 HOH HOH . O 7 HOH B 73 473 26 HOH HOH . O 7 HOH B 74 474 159 HOH HOH . O 7 HOH B 75 475 80 HOH HOH . O 7 HOH B 76 476 87 HOH HOH . O 7 HOH B 77 477 107 HOH HOH . O 7 HOH B 78 478 102 HOH HOH . O 7 HOH B 79 479 15 HOH HOH . O 7 HOH B 80 480 200 HOH HOH . O 7 HOH B 81 481 100 HOH HOH . O 7 HOH B 82 482 81 HOH HOH . O 7 HOH B 83 483 166 HOH HOH . O 7 HOH B 84 484 163 HOH HOH . O 7 HOH B 85 485 9 HOH HOH . O 7 HOH B 86 486 54 HOH HOH . O 7 HOH B 87 487 128 HOH HOH . O 7 HOH B 88 488 44 HOH HOH . O 7 HOH B 89 489 136 HOH HOH . O 7 HOH B 90 490 173 HOH HOH . O 7 HOH B 91 491 142 HOH HOH . O 7 HOH B 92 492 130 HOH HOH . O 7 HOH B 93 493 206 HOH HOH . O 7 HOH B 94 494 172 HOH HOH . O 7 HOH B 95 495 182 HOH HOH . O 7 HOH B 96 496 203 HOH HOH . O 7 HOH B 97 497 177 HOH HOH . O 7 HOH B 98 498 84 HOH HOH . O 7 HOH B 99 499 243 HOH HOH . O 7 HOH B 100 500 134 HOH HOH . O 7 HOH B 101 501 219 HOH HOH . O 7 HOH B 102 502 148 HOH HOH . O 7 HOH B 103 503 38 HOH HOH . O 7 HOH B 104 504 241 HOH HOH . O 7 HOH B 105 505 233 HOH HOH . O 7 HOH B 106 506 223 HOH HOH . O 7 HOH B 107 507 150 HOH HOH . O 7 HOH B 108 508 126 HOH HOH . O 7 HOH B 109 509 244 HOH HOH . O 7 HOH B 110 510 207 HOH HOH . O 7 HOH B 111 511 232 HOH HOH . O 7 HOH B 112 512 122 HOH HOH . O 7 HOH B 113 513 113 HOH HOH . O 7 HOH B 114 514 225 HOH HOH . O 7 HOH B 115 515 154 HOH HOH . O 7 HOH B 116 516 176 HOH HOH . O 7 HOH B 117 517 196 HOH HOH . O 7 HOH B 118 518 235 HOH HOH . O 7 HOH B 119 519 90 HOH HOH . O 7 HOH B 120 520 236 HOH HOH . O 7 HOH B 121 521 101 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . F 4 -8.707 -1.046 -12.029 1 36.71 ? C1 EDO 304 A 1 HETATM 2 O O1 EDO . . . F 4 -8.612 -2.326 -12.639 1 36.78 ? O1 EDO 304 A 1 HETATM 3 C C2 EDO . . . F 4 -10.099 -0.702 -11.678 1 35.4 ? C2 EDO 304 A 1 HETATM 4 O O2 EDO . . . F 4 -10.993 -1.813 -11.878 1 34.67 ? O2 EDO 304 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 4 #