data_7CUQ
#
_model_server_result.job_id            vYD9bFekAxT7SB2kknSdWQ 
_model_server_result.datetime_utc      '2025-02-27 01:36:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7cuq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":1007}' 
#
_entry.id    7CUQ 
#
_exptl.entry_id    7CUQ 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              727.109 
_entity.id                          9 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            Ubiquinone-8 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7CUQ 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7CUQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      9 
_struct_asym.id                             K 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 106 A HIS 106 1_555 E FE HEM . A HEM 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? 
metalc ? metalc2 A ND1 HIS 284 A HIS 284 1_555 G CU CU . A CU 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
metalc ? metalc3 A NE2 HIS 333 A HIS 333 1_555 G CU CU . A CU 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
metalc ? metalc4 A NE2 HIS 334 A HIS 334 1_555 G CU CU . A CU 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
metalc ? metalc5 A NE2 HIS 419 A HIS 419 1_555 F FE HEO . A HEO 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? 
metalc ? metalc6 A NE2 HIS 421 A HIS 421 1_555 E FE HEM . A HEM 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? 
#
_chem_comp.formula           'C49 H74 O4' 
_chem_comp.formula_weight    727.109 
_chem_comp.id                UQ8 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              Ubiquinone-8 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     '2,3-dimethoxy-5-methyl-6-[(6E,10E,14E,18E,22E,26E)-3,7,11,15,19,23,27,31-octamethyldotriaconta-2,6,10,14,18,22,26,30-oc taen-1-yl]cyclohexa-2,5-diene-1,4-dione' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C45 C44 UQ8 sing 694 n n 
C45 H45 UQ8 sing 695 n n 
C45 H45A UQ8 sing 696 n n 
C45 H45B UQ8 sing 697 n n 
C43 C44 UQ8 doub 698 n n 
C44 C46 UQ8 sing 699 n n 
C46 H46 UQ8 sing 700 n n 
C46 H46A UQ8 sing 701 n n 
C46 H46B UQ8 sing 702 n n 
C42 C43 UQ8 sing 703 n n 
C43 H43 UQ8 sing 704 n n 
C41 C42 UQ8 sing 705 n n 
C42 H42 UQ8 sing 706 n n 
C42 H42A UQ8 sing 707 n n 
C39 C41 UQ8 sing 708 n n 
C41 H41 UQ8 sing 709 n n 
C41 H41A UQ8 sing 710 n n 
C40 C39 UQ8 sing 711 n n 
C38 C39 UQ8 doub 712 n n 
C40 H40 UQ8 sing 713 n n 
C40 H40A UQ8 sing 714 n n 
C40 H40B UQ8 sing 715 e n 
C37 C38 UQ8 sing 716 n n 
C38 H38 UQ8 sing 717 n n 
C37 C36 UQ8 sing 718 n n 
C37 H37 UQ8 sing 719 n n 
C37 H37A UQ8 sing 720 n n 
C34 C36 UQ8 sing 721 n n 
C36 H36 UQ8 sing 722 n n 
C36 H36A UQ8 sing 723 n n 
C33 C34 UQ8 doub 724 n n 
C34 C35 UQ8 sing 725 n n 
C35 H35 UQ8 sing 726 n n 
C35 H35A UQ8 sing 727 n n 
C32 C33 UQ8 sing 728 e n 
C33 H33 UQ8 sing 729 n n 
C35 H35B UQ8 sing 730 n n 
C31 C32 UQ8 sing 731 n n 
C32 H32 UQ8 sing 732 n n 
C32 H32A UQ8 sing 733 n n 
C29 C31 UQ8 sing 734 n n 
C31 H31 UQ8 sing 735 n n 
C31 H31A UQ8 sing 736 n n 
C28 C29 UQ8 doub 737 n n 
C30 C29 UQ8 sing 738 n n 
C30 H30 UQ8 sing 739 n n 
C30 H30A UQ8 sing 740 n n 
C30 H30B UQ8 sing 741 e n 
C27 C28 UQ8 sing 742 n n 
C28 H28 UQ8 sing 743 n n 
C26 C27 UQ8 sing 744 n n 
C27 H27 UQ8 sing 745 n n 
C27 H27A UQ8 sing 746 n n 
C24 C26 UQ8 sing 747 n n 
C26 H26 UQ8 sing 748 n n 
C26 H26A UQ8 sing 749 n n 
C23 C24 UQ8 doub 750 n n 
C24 C25 UQ8 sing 751 n n 
C25 H25 UQ8 sing 752 n n 
C25 H25A UQ8 sing 753 n n 
C25 H25B UQ8 sing 754 e n 
C22 C23 UQ8 sing 755 n n 
C23 H23 UQ8 sing 756 n n 
C21 C22 UQ8 sing 757 n n 
C22 H22 UQ8 sing 758 n n 
C22 H22A UQ8 sing 759 n n 
C19 C21 UQ8 sing 760 n n 
C21 H21 UQ8 sing 761 n n 
C21 H21A UQ8 sing 762 n n 
C20 C19 UQ8 sing 763 n n 
C18 C19 UQ8 doub 764 n n 
C20 H20 UQ8 sing 765 n n 
C20 H20A UQ8 sing 766 n n 
C20 H20B UQ8 sing 767 e n 
C17 C18 UQ8 sing 768 n n 
C18 H18 UQ8 sing 769 n n 
C16 C17 UQ8 sing 770 n n 
C17 H17 UQ8 sing 771 n n 
C17 H17A UQ8 sing 772 n n 
C14 C16 UQ8 sing 773 n n 
C16 H16 UQ8 sing 774 n n 
C16 H16A UQ8 sing 775 n n 
C13 C14 UQ8 doub 776 n n 
C15 C14 UQ8 sing 777 n n 
C15 H15 UQ8 sing 778 n n 
C15 H15A UQ8 sing 779 n n 
C15 H15B UQ8 sing 780 e n 
C12 C13 UQ8 sing 781 n n 
C13 H13 UQ8 sing 782 n n 
C11 C12 UQ8 sing 783 n n 
C12 H12 UQ8 sing 784 n n 
C12 H12A UQ8 sing 785 n n 
C9 C11 UQ8 sing 786 n n 
C11 H11 UQ8 sing 787 n n 
C11 H11A UQ8 sing 788 n n 
C8 C9 UQ8 doub 789 n n 
C10 C9 UQ8 sing 790 n n 
C10 H10 UQ8 sing 791 n n 
C10 H10A UQ8 sing 792 n n 
C10 H10B UQ8 sing 793 e n 
C7 C8 UQ8 sing 794 n n 
C8 H8 UQ8 sing 795 n n 
C6 C7 UQ8 sing 796 n n 
C7 H7 UQ8 sing 797 n n 
C7 H7A UQ8 sing 798 n n 
C1 C6 UQ8 doub 799 n n 
C5 C6 UQ8 sing 800 n n 
C2 C1 UQ8 sing 801 n n 
C1 C1M UQ8 sing 802 n n 
C1M H1M UQ8 sing 803 n n 
C1M H1MA UQ8 sing 804 n n 
C1M H1MB UQ8 sing 805 n n 
O2 C2 UQ8 doub 806 n n 
C3 C2 UQ8 sing 807 n n 
O3 C3 UQ8 sing 808 n n 
C3 C4 UQ8 doub 809 n n 
C3M O3 UQ8 sing 810 n n 
C3M H3M UQ8 sing 811 n n 
C3M H3MA UQ8 sing 812 n n 
C3M H3MB UQ8 sing 813 n n 
O4 C4 UQ8 sing 814 n n 
C4 C5 UQ8 sing 815 n n 
C4M O4 UQ8 sing 816 n n 
C4M H4M UQ8 sing 817 n n 
C4M H4MA UQ8 sing 818 n n 
C4M H4MB UQ8 sing 819 n n 
C5 O5 UQ8 doub 820 n n 
#
_atom_sites.entry_id                     7CUQ 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 5 HEM A 1 1001 1001 HEM HEM . 
F 6 HEO A 1 1002 1002 HEO HEO . 
G 7 CU A 1 1003 1003 CU CU . 
H 8 3PE A 1 1004 1201 3PE PEH . 
I 8 3PE A 1 1005 1301 3PE PEH . 
J 8 3PE A 1 1006 1501 3PE PEH . 
K 9 UQ8 A 1 1007 1601 UQ8 UQ8 . 
L 8 3PE A 1 1008 1701 3PE PEH . 
M 8 3PE C 1 301 301 3PE PEH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C31 UQ8 . . . K 9 153.636 121.21 150.143 1 125.55 ? C31 UQ8 1007 A 1 
HETATM 2 C C29 UQ8 . . . K 9 154.193 122.539 150.649 1 125.55 ? C29 UQ8 1007 A 1 
HETATM 3 C C30 UQ8 . . . K 9 155.649 122.498 151.107 1 125.55 ? C30 UQ8 1007 A 1 
HETATM 4 C C28 UQ8 . . . K 9 153.298 123.768 150.783 1 125.55 ? C28 UQ8 1007 A 1 
HETATM 5 C C27 UQ8 . . . K 9 152.443 124.178 151.98 1 125.55 ? C27 UQ8 1007 A 1 
HETATM 6 C C26 UQ8 . . . K 9 151.902 125.589 151.768 1 125.55 ? C26 UQ8 1007 A 1 
HETATM 7 C C24 UQ8 . . . K 9 150.587 125.735 152.53 1 125.55 ? C24 UQ8 1007 A 1 
HETATM 8 C C25 UQ8 . . . K 9 149.613 126.751 151.937 1 125.55 ? C25 UQ8 1007 A 1 
HETATM 9 C C23 UQ8 . . . K 9 150.418 125.129 153.921 1 125.55 ? C23 UQ8 1007 A 1 
HETATM 10 C C22 UQ8 . . . K 9 149.278 125.355 154.91 1 125.55 ? C22 UQ8 1007 A 1 
HETATM 11 C C21 UQ8 . . . K 9 149.657 126.433 155.924 1 125.55 ? C21 UQ8 1007 A 1 
HETATM 12 C C19 UQ8 . . . K 9 149.774 125.822 157.32 1 125.55 ? C19 UQ8 1007 A 1 
HETATM 13 C C20 UQ8 . . . K 9 148.573 124.98 157.75 1 125.55 ? C20 UQ8 1007 A 1 
HETATM 14 C C18 UQ8 . . . K 9 150.783 126.384 158.319 1 125.55 ? C18 UQ8 1007 A 1 
HETATM 15 C C17 UQ8 . . . K 9 150.555 126.77 159.779 1 125.55 ? C17 UQ8 1007 A 1 
HETATM 16 C C16 UQ8 . . . K 9 150.865 125.576 160.678 1 125.55 ? C16 UQ8 1007 A 1 
HETATM 17 C C14 UQ8 . . . K 9 151.69 126.052 161.871 1 125.55 ? C14 UQ8 1007 A 1 
HETATM 18 C C15 UQ8 . . . K 9 150.891 126.416 163.119 1 125.55 ? C15 UQ8 1007 A 1 
HETATM 19 C C13 UQ8 . . . K 9 153.207 126.175 161.765 1 125.55 ? C13 UQ8 1007 A 1 
HETATM 20 C C12 UQ8 . . . K 9 154.24 126.213 162.887 1 125.55 ? C12 UQ8 1007 A 1 
HETATM 21 C C11 UQ8 . . . K 9 154.482 127.671 163.271 1 125.55 ? C11 UQ8 1007 A 1 
HETATM 22 C C9 UQ8 . . . K 9 155.826 127.812 163.98 1 125.55 ? C9 UQ8 1007 A 1 
HETATM 23 C C10 UQ8 . . . K 9 156.028 126.889 165.18 1 125.55 ? C10 UQ8 1007 A 1 
HETATM 24 C C8 UQ8 . . . K 9 157.001 128.458 163.253 1 125.55 ? C8 UQ8 1007 A 1 
HETATM 25 C C7 UQ8 . . . K 9 157.763 127.853 162.078 1 125.55 ? C7 UQ8 1007 A 1 
HETATM 26 C C6 UQ8 . . . K 9 159.022 128.662 161.775 1 125.55 ? C6 UQ8 1007 A 1 
HETATM 27 C C1 UQ8 . . . K 9 160.236 128.299 162.331 1 125.55 ? C1 UQ8 1007 A 1 
HETATM 28 C C1M UQ8 . . . K 9 160.358 127.096 163.264 1 125.55 ? C1M UQ8 1007 A 1 
HETATM 29 C C2 UQ8 . . . K 9 161.372 129.029 162.051 1 125.55 ? C2 UQ8 1007 A 1 
HETATM 30 O O2 UQ8 . . . K 9 162.568 128.619 162.647 1 125.55 ? O2 UQ8 1007 A 1 
HETATM 31 C C3 UQ8 . . . K 9 161.313 130.13 161.205 1 125.55 ? C3 UQ8 1007 A 1 
HETATM 32 O O3 UQ8 . . . K 9 162.477 130.867 160.931 1 125.55 ? O3 UQ8 1007 A 1 
HETATM 33 C C3M UQ8 . . . K 9 163.262 130.264 159.935 1 125.55 ? C3M UQ8 1007 A 1 
HETATM 34 C C4 UQ8 . . . K 9 160.095 130.496 160.639 1 125.55 ? C4 UQ8 1007 A 1 
HETATM 35 O O4 UQ8 . . . K 9 160.018 131.614 159.791 1 125.55 ? O4 UQ8 1007 A 1 
HETATM 36 C C4M UQ8 . . . K 9 160.063 131.257 158.435 1 125.55 ? C4M UQ8 1007 A 1 
HETATM 37 C C5 UQ8 . . . K 9 158.949 129.758 160.931 1 125.55 ? C5 UQ8 1007 A 1 
HETATM 38 O O5 UQ8 . . . K 9 157.706 130.099 160.382 1 125.55 ? O5 UQ8 1007 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    22 
_model_server_stats.query_time_ms           264 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           38 
#