data_7CUT
#
_model_server_result.job_id            2ozki3NQd9e-U9YTybN7zA 
_model_server_result.datetime_utc      '2024-11-13 21:33:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7cut 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":503}' 
#
_entry.id    7CUT 
#
_exptl.entry_id    7CUT 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          115.28 
_cell.angle_gamma         90 
_cell.entry_id            7CUT 
_cell.length_a            98.22 
_cell.length_b            82.65 
_cell.length_c            51.74 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7CUT 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
? 4 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 145 A CYS 145 1_555 B C1 CF0 5 B CF0 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.792 ? 
covale ? covale2 B C1 PHQ 1 B PHQ 1 1_555 B N VAL 2 B VAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? 
covale ? covale3 B C ALA 3 B ALA 3 1_555 B N FL6 4 B FL6 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? 
covale ? covale4 B C FL6 4 B FL6 4 1_555 B C1 CF0 5 B CF0 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.524 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 160 n n 
C1 C2 GOL sing 161 n n 
C1 H11 GOL sing 162 n n 
C1 H12 GOL sing 163 n n 
O1 HO1 GOL sing 164 n n 
C2 O2 GOL sing 165 n n 
C2 C3 GOL sing 166 n n 
C2 H2 GOL sing 167 n n 
O2 HO2 GOL sing 168 n n 
C3 O3 GOL sing 169 n n 
C3 H31 GOL sing 170 n n 
C3 H32 GOL sing 171 n n 
O3 HO3 GOL sing 172 n n 
#
_atom_sites.entry_id                     7CUT 
_atom_sites.fract_transf_matrix[1][1]    0.010181 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004809 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012099 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.021375 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 DMS A 1 501 501 DMS DMS . 
D 4 GOL A 1 502 601 GOL GOL . 
E 4 GOL A 1 503 701 GOL GOL . 
F 4 GOL A 1 504 801 GOL GOL . 
G 5 HOH A 1 601 114 HOH HOH . 
G 5 HOH A 2 602 131 HOH HOH . 
G 5 HOH A 3 603 163 HOH HOH . 
G 5 HOH A 4 604 63 HOH HOH . 
G 5 HOH A 5 605 148 HOH HOH . 
G 5 HOH A 6 606 128 HOH HOH . 
G 5 HOH A 7 607 55 HOH HOH . 
G 5 HOH A 8 608 24 HOH HOH . 
G 5 HOH A 9 609 87 HOH HOH . 
G 5 HOH A 10 610 90 HOH HOH . 
G 5 HOH A 11 611 118 HOH HOH . 
G 5 HOH A 12 612 81 HOH HOH . 
G 5 HOH A 13 613 65 HOH HOH . 
G 5 HOH A 14 614 41 HOH HOH . 
G 5 HOH A 15 615 42 HOH HOH . 
G 5 HOH A 16 616 180 HOH HOH . 
G 5 HOH A 17 617 49 HOH HOH . 
G 5 HOH A 18 618 69 HOH HOH . 
G 5 HOH A 19 619 21 HOH HOH . 
G 5 HOH A 20 620 28 HOH HOH . 
G 5 HOH A 21 621 68 HOH HOH . 
G 5 HOH A 22 622 58 HOH HOH . 
G 5 HOH A 23 623 64 HOH HOH . 
G 5 HOH A 24 624 76 HOH HOH . 
G 5 HOH A 25 625 44 HOH HOH . 
G 5 HOH A 26 626 25 HOH HOH . 
G 5 HOH A 27 627 38 HOH HOH . 
G 5 HOH A 28 628 2 HOH HOH . 
G 5 HOH A 29 629 73 HOH HOH . 
G 5 HOH A 30 630 185 HOH HOH . 
G 5 HOH A 31 631 166 HOH HOH . 
G 5 HOH A 32 632 40 HOH HOH . 
G 5 HOH A 33 633 5 HOH HOH . 
G 5 HOH A 34 634 179 HOH HOH . 
G 5 HOH A 35 635 4 HOH HOH . 
G 5 HOH A 36 636 89 HOH HOH . 
G 5 HOH A 37 637 57 HOH HOH . 
G 5 HOH A 38 638 74 HOH HOH . 
G 5 HOH A 39 639 33 HOH HOH . 
G 5 HOH A 40 640 20 HOH HOH . 
G 5 HOH A 41 641 22 HOH HOH . 
G 5 HOH A 42 642 1 HOH HOH . 
G 5 HOH A 43 643 113 HOH HOH . 
G 5 HOH A 44 644 17 HOH HOH . 
G 5 HOH A 45 645 86 HOH HOH . 
G 5 HOH A 46 646 3 HOH HOH . 
G 5 HOH A 47 647 143 HOH HOH . 
G 5 HOH A 48 648 50 HOH HOH . 
G 5 HOH A 49 649 96 HOH HOH . 
G 5 HOH A 50 650 36 HOH HOH . 
G 5 HOH A 51 651 92 HOH HOH . 
G 5 HOH A 52 652 11 HOH HOH . 
G 5 HOH A 53 653 19 HOH HOH . 
G 5 HOH A 54 654 13 HOH HOH . 
G 5 HOH A 55 655 102 HOH HOH . 
G 5 HOH A 56 656 105 HOH HOH . 
G 5 HOH A 57 657 156 HOH HOH . 
G 5 HOH A 58 658 56 HOH HOH . 
G 5 HOH A 59 659 62 HOH HOH . 
G 5 HOH A 60 660 39 HOH HOH . 
G 5 HOH A 61 661 100 HOH HOH . 
G 5 HOH A 62 662 75 HOH HOH . 
G 5 HOH A 63 663 9 HOH HOH . 
G 5 HOH A 64 664 6 HOH HOH . 
G 5 HOH A 65 665 14 HOH HOH . 
G 5 HOH A 66 666 134 HOH HOH . 
G 5 HOH A 67 667 117 HOH HOH . 
G 5 HOH A 68 668 47 HOH HOH . 
G 5 HOH A 69 669 110 HOH HOH . 
G 5 HOH A 70 670 192 HOH HOH . 
G 5 HOH A 71 671 125 HOH HOH . 
G 5 HOH A 72 672 109 HOH HOH . 
G 5 HOH A 73 673 43 HOH HOH . 
G 5 HOH A 74 674 18 HOH HOH . 
G 5 HOH A 75 675 91 HOH HOH . 
G 5 HOH A 76 676 84 HOH HOH . 
G 5 HOH A 77 677 99 HOH HOH . 
G 5 HOH A 78 678 147 HOH HOH . 
G 5 HOH A 79 679 31 HOH HOH . 
G 5 HOH A 80 680 177 HOH HOH . 
G 5 HOH A 81 681 181 HOH HOH . 
G 5 HOH A 82 682 7 HOH HOH . 
G 5 HOH A 83 683 107 HOH HOH . 
G 5 HOH A 84 684 170 HOH HOH . 
G 5 HOH A 85 685 34 HOH HOH . 
G 5 HOH A 86 686 12 HOH HOH . 
G 5 HOH A 87 687 150 HOH HOH . 
G 5 HOH A 88 688 48 HOH HOH . 
G 5 HOH A 89 689 132 HOH HOH . 
G 5 HOH A 90 690 29 HOH HOH . 
G 5 HOH A 91 691 191 HOH HOH . 
G 5 HOH A 92 692 26 HOH HOH . 
G 5 HOH A 93 693 187 HOH HOH . 
G 5 HOH A 94 694 173 HOH HOH . 
G 5 HOH A 95 695 37 HOH HOH . 
G 5 HOH A 96 696 45 HOH HOH . 
G 5 HOH A 97 697 35 HOH HOH . 
G 5 HOH A 98 698 54 HOH HOH . 
G 5 HOH A 99 699 53 HOH HOH . 
G 5 HOH A 100 700 46 HOH HOH . 
G 5 HOH A 101 701 51 HOH HOH . 
G 5 HOH A 102 702 10 HOH HOH . 
G 5 HOH A 103 703 85 HOH HOH . 
G 5 HOH A 104 704 82 HOH HOH . 
G 5 HOH A 105 705 70 HOH HOH . 
G 5 HOH A 106 706 116 HOH HOH . 
G 5 HOH A 107 707 66 HOH HOH . 
G 5 HOH A 108 708 78 HOH HOH . 
G 5 HOH A 109 709 52 HOH HOH . 
G 5 HOH A 110 710 15 HOH HOH . 
G 5 HOH A 111 711 32 HOH HOH . 
G 5 HOH A 112 712 103 HOH HOH . 
G 5 HOH A 113 713 127 HOH HOH . 
G 5 HOH A 114 714 60 HOH HOH . 
G 5 HOH A 115 715 138 HOH HOH . 
G 5 HOH A 116 716 175 HOH HOH . 
G 5 HOH A 117 717 8 HOH HOH . 
G 5 HOH A 118 718 145 HOH HOH . 
G 5 HOH A 119 719 93 HOH HOH . 
G 5 HOH A 120 720 112 HOH HOH . 
G 5 HOH A 121 721 30 HOH HOH . 
G 5 HOH A 122 722 152 HOH HOH . 
G 5 HOH A 123 723 162 HOH HOH . 
G 5 HOH A 124 724 59 HOH HOH . 
G 5 HOH A 125 725 155 HOH HOH . 
G 5 HOH A 126 726 140 HOH HOH . 
G 5 HOH A 127 727 154 HOH HOH . 
G 5 HOH A 128 728 120 HOH HOH . 
G 5 HOH A 129 729 126 HOH HOH . 
G 5 HOH A 130 730 83 HOH HOH . 
G 5 HOH A 131 731 157 HOH HOH . 
G 5 HOH A 132 732 159 HOH HOH . 
G 5 HOH A 133 733 144 HOH HOH . 
G 5 HOH A 134 734 164 HOH HOH . 
G 5 HOH A 135 735 174 HOH HOH . 
G 5 HOH A 136 736 172 HOH HOH . 
G 5 HOH A 137 737 171 HOH HOH . 
G 5 HOH A 138 738 119 HOH HOH . 
G 5 HOH A 139 739 149 HOH HOH . 
G 5 HOH A 140 740 158 HOH HOH . 
G 5 HOH A 141 741 165 HOH HOH . 
G 5 HOH A 142 742 94 HOH HOH . 
G 5 HOH A 143 743 124 HOH HOH . 
G 5 HOH A 144 744 184 HOH HOH . 
G 5 HOH A 145 745 176 HOH HOH . 
G 5 HOH A 146 746 115 HOH HOH . 
G 5 HOH A 147 747 186 HOH HOH . 
G 5 HOH A 148 748 188 HOH HOH . 
G 5 HOH A 149 749 161 HOH HOH . 
G 5 HOH A 150 750 182 HOH HOH . 
G 5 HOH A 151 751 153 HOH HOH . 
G 5 HOH A 152 752 160 HOH HOH . 
G 5 HOH A 153 753 190 HOH HOH . 
G 5 HOH A 154 754 146 HOH HOH . 
G 5 HOH A 155 755 137 HOH HOH . 
G 5 HOH A 156 756 101 HOH HOH . 
G 5 HOH A 157 757 167 HOH HOH . 
G 5 HOH A 158 758 169 HOH HOH . 
G 5 HOH A 159 759 136 HOH HOH . 
G 5 HOH A 160 760 88 HOH HOH . 
G 5 HOH A 161 761 189 HOH HOH . 
G 5 HOH A 162 762 67 HOH HOH . 
G 5 HOH A 163 763 133 HOH HOH . 
G 5 HOH A 164 764 79 HOH HOH . 
G 5 HOH A 165 765 139 HOH HOH . 
G 5 HOH A 166 766 95 HOH HOH . 
G 5 HOH A 167 767 121 HOH HOH . 
G 5 HOH A 168 768 168 HOH HOH . 
G 5 HOH A 169 769 122 HOH HOH . 
G 5 HOH A 170 770 183 HOH HOH . 
G 5 HOH A 171 771 108 HOH HOH . 
G 5 HOH A 172 772 72 HOH HOH . 
G 5 HOH A 173 773 61 HOH HOH . 
G 5 HOH A 174 774 80 HOH HOH . 
G 5 HOH A 175 775 71 HOH HOH . 
G 5 HOH A 176 776 98 HOH HOH . 
G 5 HOH A 177 777 193 HOH HOH . 
G 5 HOH A 178 778 178 HOH HOH . 
H 5 HOH B 1 101 16 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . E 4 -32.941 21.484 45.229 1 60.78 ? C1 GOL 503 A 1 
HETATM 2 O O1 GOL . . . E 4 -32.018 20.706 45.911 1 61.86 ? O1 GOL 503 A 1 
HETATM 3 C C2 GOL . . . E 4 -33.839 22.221 46.271 1 56.78 ? C2 GOL 503 A 1 
HETATM 4 O O2 GOL . . . E 4 -34.04 21.403 47.377 1 60.63 ? O2 GOL 503 A 1 
HETATM 5 C C3 GOL . . . E 4 -33.132 23.602 46.605 1 55.27 ? C3 GOL 503 A 1 
HETATM 6 O O3 GOL . . . E 4 -31.733 23.362 46.591 1 63.3 ? O3 GOL 503 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           283 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           6 
#