data_7CX1 # _model_server_result.job_id hHch4yCDSHtNiBEIAPirOw _model_server_result.datetime_utc '2024-11-08 06:08:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7cx1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1102}' # _entry.id 7CX1 # _exptl.entry_id 7CX1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 165.232 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-[(2R)-2-(methylamino)propyl]phenol _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7CX1 _cell.length_a 131.49 _cell.length_b 131.49 _cell.length_c 385.66 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7CX1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,H 1 1,2 B,C,E,F,G,I,J 2 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 x-y,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C HIS 391 A HIS 391 1_555 A N LLP 392 A LLP 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.31 ? covale ? covale2 A C LLP 392 A LLP 392 1_555 A N MET 393 A MET 393 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 B C HIS 391 B HIS 391 1_555 B N LLP 392 B LLP 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.308 ? covale ? covale4 B C LLP 392 B LLP 392 1_555 B N MET 393 B MET 393 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale5 C C HIS 391 C HIS 391 1_555 C N LLP 392 C LLP 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.316 ? covale ? covale6 C C LLP 392 C LLP 392 1_555 C N MET 393 C MET 393 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? # _chem_comp.formula 'C10 H15 N O' _chem_comp.formula_weight 165.232 _chem_comp.id GKU _chem_comp.mon_nstd_flag . _chem_comp.name 4-[(2R)-2-(methylamino)propyl]phenol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CE2 CD2 GKU doub 70 n y CE2 CZ GKU sing 71 n y OH CZ GKU sing 72 n n CD2 CG GKU sing 73 n y CZ CE1 GKU doub 74 n y CG CB GKU sing 75 n n CG CD1 GKU doub 76 n y CE1 CD1 GKU sing 77 n y CB CA GKU sing 78 n n CA C GKU sing 79 n n CA N GKU sing 80 n n C10 N GKU sing 81 n n C H3 GKU sing 82 n n C H2 GKU sing 83 n n C H1 GKU sing 84 n n OH H4 GKU sing 85 n n CE1 H5 GKU sing 86 n n CD1 H6 GKU sing 87 n n CE2 H7 GKU sing 88 n n CD2 H8 GKU sing 89 n n CB H9 GKU sing 90 n n CB H10 GKU sing 91 n n CA H11 GKU sing 92 n n N H13 GKU sing 93 n n C10 H16 GKU sing 94 n n C10 H14 GKU sing 95 n n C10 H15 GKU sing 96 n n # _atom_sites.entry_id 7CX1 _atom_sites.fract_transf_matrix[1][1] 0.007605 _atom_sites.fract_transf_matrix[1][2] 0.004391 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008782 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002593 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 GKU A 1 701 701 GKU MTN . E 2 GKU B 1 1101 1101 GKU MTN . F 2 GKU B 1 1102 1201 GKU MTN . G 2 GKU C 1 701 701 GKU MTN . H 3 HOH A 1 801 115 HOH HOH . H 3 HOH A 2 802 58 HOH HOH . H 3 HOH A 3 803 171 HOH HOH . H 3 HOH A 4 804 202 HOH HOH . H 3 HOH A 5 805 47 HOH HOH . H 3 HOH A 6 806 78 HOH HOH . H 3 HOH A 7 807 72 HOH HOH . H 3 HOH A 8 808 133 HOH HOH . H 3 HOH A 9 809 196 HOH HOH . H 3 HOH A 10 810 45 HOH HOH . H 3 HOH A 11 811 28 HOH HOH . H 3 HOH A 12 812 108 HOH HOH . H 3 HOH A 13 813 128 HOH HOH . H 3 HOH A 14 814 150 HOH HOH . H 3 HOH A 15 815 87 HOH HOH . H 3 HOH A 16 816 94 HOH HOH . H 3 HOH A 17 817 153 HOH HOH . H 3 HOH A 18 818 18 HOH HOH . H 3 HOH A 19 819 156 HOH HOH . H 3 HOH A 20 820 187 HOH HOH . H 3 HOH A 21 821 35 HOH HOH . H 3 HOH A 22 822 8 HOH HOH . H 3 HOH A 23 823 5 HOH HOH . H 3 HOH A 24 824 116 HOH HOH . H 3 HOH A 25 825 60 HOH HOH . H 3 HOH A 26 826 39 HOH HOH . H 3 HOH A 27 827 34 HOH HOH . H 3 HOH A 28 828 66 HOH HOH . H 3 HOH A 29 829 75 HOH HOH . H 3 HOH A 30 830 10 HOH HOH . H 3 HOH A 31 831 17 HOH HOH . H 3 HOH A 32 832 130 HOH HOH . H 3 HOH A 33 833 179 HOH HOH . H 3 HOH A 34 834 144 HOH HOH . H 3 HOH A 35 835 173 HOH HOH . H 3 HOH A 36 836 24 HOH HOH . H 3 HOH A 37 837 52 HOH HOH . H 3 HOH A 38 838 106 HOH HOH . H 3 HOH A 39 839 2 HOH HOH . H 3 HOH A 40 840 57 HOH HOH . H 3 HOH A 41 841 155 HOH HOH . H 3 HOH A 42 842 71 HOH HOH . H 3 HOH A 43 843 178 HOH HOH . H 3 HOH A 44 844 129 HOH HOH . H 3 HOH A 45 845 85 HOH HOH . H 3 HOH A 46 846 139 HOH HOH . H 3 HOH A 47 847 6 HOH HOH . H 3 HOH A 48 848 61 HOH HOH . H 3 HOH A 49 849 14 HOH HOH . H 3 HOH A 50 850 53 HOH HOH . H 3 HOH A 51 851 62 HOH HOH . H 3 HOH A 52 852 36 HOH HOH . H 3 HOH A 53 853 188 HOH HOH . H 3 HOH A 54 854 12 HOH HOH . H 3 HOH A 55 855 103 HOH HOH . H 3 HOH A 56 856 172 HOH HOH . H 3 HOH A 57 857 148 HOH HOH . H 3 HOH A 58 858 143 HOH HOH . H 3 HOH A 59 859 176 HOH HOH . H 3 HOH A 60 860 159 HOH HOH . H 3 HOH A 61 861 21 HOH HOH . H 3 HOH A 62 862 16 HOH HOH . H 3 HOH A 63 863 51 HOH HOH . H 3 HOH A 64 864 119 HOH HOH . H 3 HOH A 65 865 89 HOH HOH . H 3 HOH A 66 866 70 HOH HOH . H 3 HOH A 67 867 162 HOH HOH . H 3 HOH A 68 868 157 HOH HOH . H 3 HOH A 69 869 147 HOH HOH . H 3 HOH A 70 870 199 HOH HOH . H 3 HOH A 71 871 64 HOH HOH . H 3 HOH A 72 872 127 HOH HOH . H 3 HOH A 73 873 81 HOH HOH . H 3 HOH A 74 874 136 HOH HOH . H 3 HOH A 75 875 135 HOH HOH . H 3 HOH A 76 876 101 HOH HOH . H 3 HOH A 77 877 184 HOH HOH . H 3 HOH A 78 878 189 HOH HOH . I 3 HOH B 1 1201 26 HOH HOH . I 3 HOH B 2 1202 91 HOH HOH . I 3 HOH B 3 1203 3 HOH HOH . I 3 HOH B 4 1204 121 HOH HOH . I 3 HOH B 5 1205 180 HOH HOH . I 3 HOH B 6 1206 48 HOH HOH . I 3 HOH B 7 1207 95 HOH HOH . I 3 HOH B 8 1208 165 HOH HOH . I 3 HOH B 9 1209 124 HOH HOH . I 3 HOH B 10 1210 32 HOH HOH . I 3 HOH B 11 1211 27 HOH HOH . I 3 HOH B 12 1212 125 HOH HOH . I 3 HOH B 13 1213 138 HOH HOH . I 3 HOH B 14 1214 102 HOH HOH . I 3 HOH B 15 1215 50 HOH HOH . I 3 HOH B 16 1216 69 HOH HOH . I 3 HOH B 17 1217 43 HOH HOH . I 3 HOH B 18 1218 114 HOH HOH . I 3 HOH B 19 1219 88 HOH HOH . I 3 HOH B 20 1220 190 HOH HOH . I 3 HOH B 21 1221 186 HOH HOH . I 3 HOH B 22 1222 15 HOH HOH . I 3 HOH B 23 1223 145 HOH HOH . I 3 HOH B 24 1224 110 HOH HOH . I 3 HOH B 25 1225 182 HOH HOH . I 3 HOH B 26 1226 123 HOH HOH . I 3 HOH B 27 1227 25 HOH HOH . I 3 HOH B 28 1228 83 HOH HOH . I 3 HOH B 29 1229 200 HOH HOH . I 3 HOH B 30 1230 84 HOH HOH . I 3 HOH B 31 1231 170 HOH HOH . I 3 HOH B 32 1232 41 HOH HOH . I 3 HOH B 33 1233 68 HOH HOH . I 3 HOH B 34 1234 164 HOH HOH . I 3 HOH B 35 1235 104 HOH HOH . I 3 HOH B 36 1236 40 HOH HOH . I 3 HOH B 37 1237 77 HOH HOH . I 3 HOH B 38 1238 113 HOH HOH . I 3 HOH B 39 1239 197 HOH HOH . I 3 HOH B 40 1240 100 HOH HOH . I 3 HOH B 41 1241 181 HOH HOH . I 3 HOH B 42 1242 174 HOH HOH . I 3 HOH B 43 1243 137 HOH HOH . I 3 HOH B 44 1244 161 HOH HOH . I 3 HOH B 45 1245 97 HOH HOH . I 3 HOH B 46 1246 109 HOH HOH . I 3 HOH B 47 1247 140 HOH HOH . I 3 HOH B 48 1248 79 HOH HOH . I 3 HOH B 49 1249 185 HOH HOH . I 3 HOH B 50 1250 38 HOH HOH . I 3 HOH B 51 1251 201 HOH HOH . I 3 HOH B 52 1252 63 HOH HOH . I 3 HOH B 53 1253 141 HOH HOH . I 3 HOH B 54 1254 167 HOH HOH . I 3 HOH B 55 1255 134 HOH HOH . I 3 HOH B 56 1256 33 HOH HOH . I 3 HOH B 57 1257 98 HOH HOH . I 3 HOH B 58 1258 37 HOH HOH . I 3 HOH B 59 1259 22 HOH HOH . I 3 HOH B 60 1260 168 HOH HOH . I 3 HOH B 61 1261 207 HOH HOH . I 3 HOH B 62 1262 105 HOH HOH . J 3 HOH C 1 801 154 HOH HOH . J 3 HOH C 2 802 183 HOH HOH . J 3 HOH C 3 803 96 HOH HOH . J 3 HOH C 4 804 44 HOH HOH . J 3 HOH C 5 805 160 HOH HOH . J 3 HOH C 6 806 204 HOH HOH . J 3 HOH C 7 807 194 HOH HOH . J 3 HOH C 8 808 82 HOH HOH . J 3 HOH C 9 809 122 HOH HOH . J 3 HOH C 10 810 111 HOH HOH . J 3 HOH C 11 811 7 HOH HOH . J 3 HOH C 12 812 9 HOH HOH . J 3 HOH C 13 813 19 HOH HOH . J 3 HOH C 14 814 175 HOH HOH . J 3 HOH C 15 815 30 HOH HOH . J 3 HOH C 16 816 11 HOH HOH . J 3 HOH C 17 817 73 HOH HOH . J 3 HOH C 18 818 56 HOH HOH . J 3 HOH C 19 819 117 HOH HOH . J 3 HOH C 20 820 49 HOH HOH . J 3 HOH C 21 821 198 HOH HOH . J 3 HOH C 22 822 191 HOH HOH . J 3 HOH C 23 823 118 HOH HOH . J 3 HOH C 24 824 76 HOH HOH . J 3 HOH C 25 825 42 HOH HOH . J 3 HOH C 26 826 158 HOH HOH . J 3 HOH C 27 827 151 HOH HOH . J 3 HOH C 28 828 65 HOH HOH . J 3 HOH C 29 829 152 HOH HOH . J 3 HOH C 30 830 55 HOH HOH . J 3 HOH C 31 831 46 HOH HOH . J 3 HOH C 32 832 1 HOH HOH . J 3 HOH C 33 833 54 HOH HOH . J 3 HOH C 34 834 59 HOH HOH . J 3 HOH C 35 835 4 HOH HOH . J 3 HOH C 36 836 166 HOH HOH . J 3 HOH C 37 837 193 HOH HOH . J 3 HOH C 38 838 177 HOH HOH . J 3 HOH C 39 839 169 HOH HOH . J 3 HOH C 40 840 23 HOH HOH . J 3 HOH C 41 841 192 HOH HOH . J 3 HOH C 42 842 112 HOH HOH . J 3 HOH C 43 843 20 HOH HOH . J 3 HOH C 44 844 74 HOH HOH . J 3 HOH C 45 845 131 HOH HOH . J 3 HOH C 46 846 90 HOH HOH . J 3 HOH C 47 847 132 HOH HOH . J 3 HOH C 48 848 93 HOH HOH . J 3 HOH C 49 849 163 HOH HOH . J 3 HOH C 50 850 149 HOH HOH . J 3 HOH C 51 851 107 HOH HOH . J 3 HOH C 52 852 86 HOH HOH . J 3 HOH C 53 853 126 HOH HOH . J 3 HOH C 54 854 205 HOH HOH . J 3 HOH C 55 855 92 HOH HOH . J 3 HOH C 56 856 31 HOH HOH . J 3 HOH C 57 857 203 HOH HOH . J 3 HOH C 58 858 29 HOH HOH . J 3 HOH C 59 859 13 HOH HOH . J 3 HOH C 60 860 80 HOH HOH . J 3 HOH C 61 861 206 HOH HOH . J 3 HOH C 62 862 209 HOH HOH . J 3 HOH C 63 863 210 HOH HOH . J 3 HOH C 64 864 208 HOH HOH . J 3 HOH C 65 865 211 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C GKU . . . F 2 12.545 43.741 49.899 1 44.13 ? C GKU 1102 B 1 HETATM 2 O OH GKU . . . F 2 11.721 41.891 57.665 1 39.72 ? OH GKU 1102 B 1 HETATM 3 C CZ GKU . . . F 2 12.13 42.191 56.332 1 43.1 ? CZ GKU 1102 B 1 HETATM 4 C CE1 GKU . . . F 2 11.937 43.459 55.813 1 41.38 ? CE1 GKU 1102 B 1 HETATM 5 C CD1 GKU . . . F 2 12.339 43.775 54.508 1 46.92 ? CD1 GKU 1102 B 1 HETATM 6 C CE2 GKU . . . F 2 12.736 41.238 55.515 1 48.54 ? CE2 GKU 1102 B 1 HETATM 7 C CD2 GKU . . . F 2 13.145 41.555 54.212 1 54.12 ? CD2 GKU 1102 B 1 HETATM 8 C CG GKU . . . F 2 12.961 42.84 53.701 1 47.64 ? CG GKU 1102 B 1 HETATM 9 C CB GKU . . . F 2 13.367 43.181 52.252 1 46.33 ? CB GKU 1102 B 1 HETATM 10 C CA GKU . . . F 2 12.172 43.156 51.279 1 60.08 ? CA GKU 1102 B 1 HETATM 11 N N GKU . . . F 2 11.672 41.777 51.185 1 59.41 ? N GKU 1102 B 1 HETATM 12 C C10 GKU . . . F 2 10.594 41.567 52.147 1 48.73 ? C10 GKU 1102 B 1 HETATM 13 H H3 GKU . . . F 2 11.688 43.674 49.234 1 52.41 ? H3 GKU 1102 B 1 HETATM 14 H H2 GKU . . . F 2 12.834 44.781 50.012 1 52.41 ? H2 GKU 1102 B 1 HETATM 15 H H1 GKU . . . F 2 13.373 43.178 49.479 1 52.41 ? H1 GKU 1102 B 1 HETATM 16 H H4 GKU . . . F 2 12.427 42.066 58.271 1 47.11 ? H4 GKU 1102 B 1 HETATM 17 H H5 GKU . . . F 2 11.467 44.219 56.424 1 49.1 ? H5 GKU 1102 B 1 HETATM 18 H H6 GKU . . . F 2 12.159 44.772 54.125 1 55.75 ? H6 GKU 1102 B 1 HETATM 19 H H7 GKU . . . F 2 12.895 40.236 55.894 1 57.7 ? H7 GKU 1102 B 1 HETATM 20 H H8 GKU . . . F 2 13.608 40.794 53.596 1 64.4 ? H8 GKU 1102 B 1 HETATM 21 H H9 GKU . . . F 2 14.106 42.461 51.917 1 55.05 ? H9 GKU 1102 B 1 HETATM 22 H H10 GKU . . . F 2 13.81 44.172 52.237 1 55.05 ? H10 GKU 1102 B 1 HETATM 23 H H11 GKU . . . F 2 11.381 43.792 51.659 1 71.54 ? H11 GKU 1102 B 1 HETATM 24 H H13 GKU . . . F 2 11.324 41.614 50.26 1 70.74 ? H13 GKU 1102 B 1 HETATM 25 H H16 GKU . . . F 2 9.74 42.18 51.873 1 57.92 ? H16 GKU 1102 B 1 HETATM 26 H H14 GKU . . . F 2 10.936 41.846 53.14 1 57.92 ? H14 GKU 1102 B 1 HETATM 27 H H15 GKU . . . F 2 10.304 40.521 52.145 1 57.92 ? H15 GKU 1102 B 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 42 _model_server_stats.query_time_ms 329 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 27 #