data_7CXG # _model_server_result.job_id uWYJQjOzpL0cBGPGPOI0mA _model_server_result.datetime_utc '2025-01-10 07:24:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7cxg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":501}' # _entry.id 7CXG # _exptl.entry_id 7CXG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.399 _cell.angle_gamma 90 _cell.entry_id 7CXG _cell.length_a 91.986 _cell.length_b 59.886 _cell.length_c 117.761 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7CXG _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,F 1 1 B,E,G 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_455 x-1/2,y+1/2,z 1 0 0 0 1 0 0 0 1 -45.993 29.943 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 7CXG _atom_sites.fract_transf_matrix[1][1] 0.010871 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00259 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016698 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008729 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 501 1 GOL GOL . D 2 GOL A 1 502 2 GOL GOL . E 2 GOL B 1 501 3 GOL GOL . F 3 HOH A 1 601 204 HOH HOH . F 3 HOH A 2 602 230 HOH HOH . F 3 HOH A 3 603 209 HOH HOH . F 3 HOH A 4 604 216 HOH HOH . F 3 HOH A 5 605 263 HOH HOH . F 3 HOH A 6 606 259 HOH HOH . F 3 HOH A 7 607 286 HOH HOH . F 3 HOH A 8 608 163 HOH HOH . F 3 HOH A 9 609 173 HOH HOH . F 3 HOH A 10 610 111 HOH HOH . F 3 HOH A 11 611 164 HOH HOH . F 3 HOH A 12 612 203 HOH HOH . F 3 HOH A 13 613 58 HOH HOH . F 3 HOH A 14 614 273 HOH HOH . F 3 HOH A 15 615 144 HOH HOH . F 3 HOH A 16 616 282 HOH HOH . F 3 HOH A 17 617 287 HOH HOH . F 3 HOH A 18 618 73 HOH HOH . F 3 HOH A 19 619 212 HOH HOH . F 3 HOH A 20 620 264 HOH HOH . F 3 HOH A 21 621 181 HOH HOH . F 3 HOH A 22 622 214 HOH HOH . F 3 HOH A 23 623 100 HOH HOH . F 3 HOH A 24 624 76 HOH HOH . F 3 HOH A 25 625 90 HOH HOH . F 3 HOH A 26 626 18 HOH HOH . F 3 HOH A 27 627 251 HOH HOH . F 3 HOH A 28 628 221 HOH HOH . F 3 HOH A 29 629 197 HOH HOH . F 3 HOH A 30 630 62 HOH HOH . F 3 HOH A 31 631 5 HOH HOH . F 3 HOH A 32 632 168 HOH HOH . F 3 HOH A 33 633 1 HOH HOH . F 3 HOH A 34 634 129 HOH HOH . F 3 HOH A 35 635 175 HOH HOH . F 3 HOH A 36 636 198 HOH HOH . F 3 HOH A 37 637 15 HOH HOH . F 3 HOH A 38 638 35 HOH HOH . F 3 HOH A 39 639 177 HOH HOH . F 3 HOH A 40 640 149 HOH HOH . F 3 HOH A 41 641 46 HOH HOH . F 3 HOH A 42 642 244 HOH HOH . F 3 HOH A 43 643 16 HOH HOH . F 3 HOH A 44 644 131 HOH HOH . F 3 HOH A 45 645 79 HOH HOH . F 3 HOH A 46 646 4 HOH HOH . F 3 HOH A 47 647 65 HOH HOH . F 3 HOH A 48 648 36 HOH HOH . F 3 HOH A 49 649 20 HOH HOH . F 3 HOH A 50 650 66 HOH HOH . F 3 HOH A 51 651 195 HOH HOH . F 3 HOH A 52 652 55 HOH HOH . F 3 HOH A 53 653 87 HOH HOH . F 3 HOH A 54 654 24 HOH HOH . F 3 HOH A 55 655 57 HOH HOH . F 3 HOH A 56 656 265 HOH HOH . F 3 HOH A 57 657 26 HOH HOH . F 3 HOH A 58 658 252 HOH HOH . F 3 HOH A 59 659 169 HOH HOH . F 3 HOH A 60 660 136 HOH HOH . F 3 HOH A 61 661 255 HOH HOH . F 3 HOH A 62 662 83 HOH HOH . F 3 HOH A 63 663 165 HOH HOH . F 3 HOH A 64 664 272 HOH HOH . F 3 HOH A 65 665 82 HOH HOH . F 3 HOH A 66 666 133 HOH HOH . F 3 HOH A 67 667 8 HOH HOH . F 3 HOH A 68 668 94 HOH HOH . F 3 HOH A 69 669 39 HOH HOH . F 3 HOH A 70 670 7 HOH HOH . F 3 HOH A 71 671 6 HOH HOH . F 3 HOH A 72 672 38 HOH HOH . F 3 HOH A 73 673 236 HOH HOH . F 3 HOH A 74 674 96 HOH HOH . F 3 HOH A 75 675 59 HOH HOH . F 3 HOH A 76 676 218 HOH HOH . F 3 HOH A 77 677 74 HOH HOH . F 3 HOH A 78 678 12 HOH HOH . F 3 HOH A 79 679 183 HOH HOH . F 3 HOH A 80 680 25 HOH HOH . F 3 HOH A 81 681 23 HOH HOH . F 3 HOH A 82 682 186 HOH HOH . F 3 HOH A 83 683 279 HOH HOH . F 3 HOH A 84 684 49 HOH HOH . F 3 HOH A 85 685 22 HOH HOH . F 3 HOH A 86 686 33 HOH HOH . F 3 HOH A 87 687 108 HOH HOH . F 3 HOH A 88 688 109 HOH HOH . F 3 HOH A 89 689 43 HOH HOH . F 3 HOH A 90 690 277 HOH HOH . F 3 HOH A 91 691 68 HOH HOH . F 3 HOH A 92 692 266 HOH HOH . F 3 HOH A 93 693 32 HOH HOH . F 3 HOH A 94 694 54 HOH HOH . F 3 HOH A 95 695 61 HOH HOH . F 3 HOH A 96 696 28 HOH HOH . F 3 HOH A 97 697 148 HOH HOH . F 3 HOH A 98 698 157 HOH HOH . F 3 HOH A 99 699 254 HOH HOH . F 3 HOH A 100 700 208 HOH HOH . F 3 HOH A 101 701 288 HOH HOH . F 3 HOH A 102 702 102 HOH HOH . F 3 HOH A 103 703 10 HOH HOH . F 3 HOH A 104 704 196 HOH HOH . F 3 HOH A 105 705 166 HOH HOH . F 3 HOH A 106 706 44 HOH HOH . F 3 HOH A 107 707 154 HOH HOH . F 3 HOH A 108 708 91 HOH HOH . F 3 HOH A 109 709 241 HOH HOH . F 3 HOH A 110 710 281 HOH HOH . F 3 HOH A 111 711 2 HOH HOH . F 3 HOH A 112 712 42 HOH HOH . F 3 HOH A 113 713 51 HOH HOH . F 3 HOH A 114 714 86 HOH HOH . F 3 HOH A 115 715 99 HOH HOH . F 3 HOH A 116 716 249 HOH HOH . F 3 HOH A 117 717 192 HOH HOH . F 3 HOH A 118 718 95 HOH HOH . F 3 HOH A 119 719 34 HOH HOH . F 3 HOH A 120 720 104 HOH HOH . F 3 HOH A 121 721 48 HOH HOH . F 3 HOH A 122 722 71 HOH HOH . F 3 HOH A 123 723 220 HOH HOH . F 3 HOH A 124 724 27 HOH HOH . F 3 HOH A 125 725 291 HOH HOH . F 3 HOH A 126 726 253 HOH HOH . F 3 HOH A 127 727 211 HOH HOH . F 3 HOH A 128 728 213 HOH HOH . F 3 HOH A 129 729 217 HOH HOH . F 3 HOH A 130 730 155 HOH HOH . F 3 HOH A 131 731 151 HOH HOH . F 3 HOH A 132 732 122 HOH HOH . F 3 HOH A 133 733 188 HOH HOH . F 3 HOH A 134 734 78 HOH HOH . F 3 HOH A 135 735 293 HOH HOH . F 3 HOH A 136 736 207 HOH HOH . F 3 HOH A 137 737 174 HOH HOH . F 3 HOH A 138 738 202 HOH HOH . F 3 HOH A 139 739 295 HOH HOH . F 3 HOH A 140 740 210 HOH HOH . F 3 HOH A 141 741 219 HOH HOH . F 3 HOH A 142 742 245 HOH HOH . F 3 HOH A 143 743 118 HOH HOH . F 3 HOH A 144 744 201 HOH HOH . F 3 HOH A 145 745 125 HOH HOH . F 3 HOH A 146 746 240 HOH HOH . F 3 HOH A 147 747 77 HOH HOH . F 3 HOH A 148 748 260 HOH HOH . F 3 HOH A 149 749 206 HOH HOH . F 3 HOH A 150 750 292 HOH HOH . F 3 HOH A 151 751 93 HOH HOH . F 3 HOH A 152 752 205 HOH HOH . F 3 HOH A 153 753 235 HOH HOH . F 3 HOH A 154 754 85 HOH HOH . F 3 HOH A 155 755 123 HOH HOH . F 3 HOH A 156 756 121 HOH HOH . F 3 HOH A 157 757 215 HOH HOH . F 3 HOH A 158 758 237 HOH HOH . G 3 HOH B 1 601 296 HOH HOH . G 3 HOH B 2 602 290 HOH HOH . G 3 HOH B 3 603 106 HOH HOH . G 3 HOH B 4 604 250 HOH HOH . G 3 HOH B 5 605 256 HOH HOH . G 3 HOH B 6 606 88 HOH HOH . G 3 HOH B 7 607 280 HOH HOH . G 3 HOH B 8 608 284 HOH HOH . G 3 HOH B 9 609 115 HOH HOH . G 3 HOH B 10 610 269 HOH HOH . G 3 HOH B 11 611 98 HOH HOH . G 3 HOH B 12 612 142 HOH HOH . G 3 HOH B 13 613 113 HOH HOH . G 3 HOH B 14 614 119 HOH HOH . G 3 HOH B 15 615 180 HOH HOH . G 3 HOH B 16 616 92 HOH HOH . G 3 HOH B 17 617 80 HOH HOH . G 3 HOH B 18 618 107 HOH HOH . G 3 HOH B 19 619 3 HOH HOH . G 3 HOH B 20 620 53 HOH HOH . G 3 HOH B 21 621 41 HOH HOH . G 3 HOH B 22 622 45 HOH HOH . G 3 HOH B 23 623 285 HOH HOH . G 3 HOH B 24 624 170 HOH HOH . G 3 HOH B 25 625 112 HOH HOH . G 3 HOH B 26 626 89 HOH HOH . G 3 HOH B 27 627 47 HOH HOH . G 3 HOH B 28 628 257 HOH HOH . G 3 HOH B 29 629 117 HOH HOH . G 3 HOH B 30 630 31 HOH HOH . G 3 HOH B 31 631 84 HOH HOH . G 3 HOH B 32 632 146 HOH HOH . G 3 HOH B 33 633 171 HOH HOH . G 3 HOH B 34 634 19 HOH HOH . G 3 HOH B 35 635 274 HOH HOH . G 3 HOH B 36 636 172 HOH HOH . G 3 HOH B 37 637 193 HOH HOH . G 3 HOH B 38 638 179 HOH HOH . G 3 HOH B 39 639 37 HOH HOH . G 3 HOH B 40 640 29 HOH HOH . G 3 HOH B 41 641 139 HOH HOH . G 3 HOH B 42 642 13 HOH HOH . G 3 HOH B 43 643 191 HOH HOH . G 3 HOH B 44 644 159 HOH HOH . G 3 HOH B 45 645 72 HOH HOH . G 3 HOH B 46 646 103 HOH HOH . G 3 HOH B 47 647 17 HOH HOH . G 3 HOH B 48 648 128 HOH HOH . G 3 HOH B 49 649 190 HOH HOH . G 3 HOH B 50 650 276 HOH HOH . G 3 HOH B 51 651 67 HOH HOH . G 3 HOH B 52 652 116 HOH HOH . G 3 HOH B 53 653 189 HOH HOH . G 3 HOH B 54 654 130 HOH HOH . G 3 HOH B 55 655 137 HOH HOH . G 3 HOH B 56 656 143 HOH HOH . G 3 HOH B 57 657 134 HOH HOH . G 3 HOH B 58 658 101 HOH HOH . G 3 HOH B 59 659 234 HOH HOH . G 3 HOH B 60 660 75 HOH HOH . G 3 HOH B 61 661 56 HOH HOH . G 3 HOH B 62 662 50 HOH HOH . G 3 HOH B 63 663 138 HOH HOH . G 3 HOH B 64 664 194 HOH HOH . G 3 HOH B 65 665 258 HOH HOH . G 3 HOH B 66 666 176 HOH HOH . G 3 HOH B 67 667 70 HOH HOH . G 3 HOH B 68 668 14 HOH HOH . G 3 HOH B 69 669 167 HOH HOH . G 3 HOH B 70 670 63 HOH HOH . G 3 HOH B 71 671 11 HOH HOH . G 3 HOH B 72 672 21 HOH HOH . G 3 HOH B 73 673 156 HOH HOH . G 3 HOH B 74 674 242 HOH HOH . G 3 HOH B 75 675 231 HOH HOH . G 3 HOH B 76 676 200 HOH HOH . G 3 HOH B 77 677 161 HOH HOH . G 3 HOH B 78 678 127 HOH HOH . G 3 HOH B 79 679 178 HOH HOH . G 3 HOH B 80 680 247 HOH HOH . G 3 HOH B 81 681 60 HOH HOH . G 3 HOH B 82 682 238 HOH HOH . G 3 HOH B 83 683 135 HOH HOH . G 3 HOH B 84 684 187 HOH HOH . G 3 HOH B 85 685 140 HOH HOH . G 3 HOH B 86 686 145 HOH HOH . G 3 HOH B 87 687 141 HOH HOH . G 3 HOH B 88 688 182 HOH HOH . G 3 HOH B 89 689 114 HOH HOH . G 3 HOH B 90 690 294 HOH HOH . G 3 HOH B 91 691 268 HOH HOH . G 3 HOH B 92 692 52 HOH HOH . G 3 HOH B 93 693 275 HOH HOH . G 3 HOH B 94 694 64 HOH HOH . G 3 HOH B 95 695 110 HOH HOH . G 3 HOH B 96 696 185 HOH HOH . G 3 HOH B 97 697 105 HOH HOH . G 3 HOH B 98 698 150 HOH HOH . G 3 HOH B 99 699 270 HOH HOH . G 3 HOH B 100 700 9 HOH HOH . G 3 HOH B 101 701 184 HOH HOH . G 3 HOH B 102 702 271 HOH HOH . G 3 HOH B 103 703 228 HOH HOH . G 3 HOH B 104 704 126 HOH HOH . G 3 HOH B 105 705 40 HOH HOH . G 3 HOH B 106 706 162 HOH HOH . G 3 HOH B 107 707 248 HOH HOH . G 3 HOH B 108 708 147 HOH HOH . G 3 HOH B 109 709 132 HOH HOH . G 3 HOH B 110 710 152 HOH HOH . G 3 HOH B 111 711 69 HOH HOH . G 3 HOH B 112 712 246 HOH HOH . G 3 HOH B 113 713 160 HOH HOH . G 3 HOH B 114 714 158 HOH HOH . G 3 HOH B 115 715 222 HOH HOH . G 3 HOH B 116 716 229 HOH HOH . G 3 HOH B 117 717 233 HOH HOH . G 3 HOH B 118 718 262 HOH HOH . G 3 HOH B 119 719 120 HOH HOH . G 3 HOH B 120 720 227 HOH HOH . G 3 HOH B 121 721 199 HOH HOH . G 3 HOH B 122 722 278 HOH HOH . G 3 HOH B 123 723 261 HOH HOH . G 3 HOH B 124 724 97 HOH HOH . G 3 HOH B 125 725 232 HOH HOH . G 3 HOH B 126 726 239 HOH HOH . G 3 HOH B 127 727 124 HOH HOH . G 3 HOH B 128 728 225 HOH HOH . G 3 HOH B 129 729 153 HOH HOH . G 3 HOH B 130 730 223 HOH HOH . G 3 HOH B 131 731 289 HOH HOH . G 3 HOH B 132 732 283 HOH HOH . G 3 HOH B 133 733 224 HOH HOH . G 3 HOH B 134 734 30 HOH HOH . G 3 HOH B 135 735 243 HOH HOH . G 3 HOH B 136 736 226 HOH HOH . G 3 HOH B 137 737 267 HOH HOH . G 3 HOH B 138 738 81 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 2 37.802 -8.796 42.165 1 43.84 ? C1 GOL 501 B 1 HETATM 2 O O1 GOL . . . E 2 39.043 -8.094 42.169 1 43.93 ? O1 GOL 501 B 1 HETATM 3 C C2 GOL . . . E 2 37.927 -10.161 41.519 1 43.63 ? C2 GOL 501 B 1 HETATM 4 O O2 GOL . . . E 2 36.928 -11.043 42.025 1 40.23 ? O2 GOL 501 B 1 HETATM 5 C C3 GOL . . . E 2 39.291 -10.791 41.702 1 44.12 ? C3 GOL 501 B 1 HETATM 6 O O3 GOL . . . E 2 39.281 -12.181 41.389 1 45.38 ? O3 GOL 501 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #