data_7CYX # _model_server_result.job_id cubz7rgEELICJ90x2rprlA _model_server_result.datetime_utc '2024-11-26 14:01:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7cyx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 7CYX # _exptl.entry_id 7CYX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7CYX _cell.length_a 82.18 _cell.length_b 132.81 _cell.length_c 165.212 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7CYX _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 83 n n PA O2A FAD sing 84 n n PA O5B FAD sing 85 n n PA O3P FAD sing 86 n n O2A HOA2 FAD sing 87 n n O5B C5B FAD sing 88 n n C5B C4B FAD sing 89 n n C5B H51A FAD sing 90 n n C5B H52A FAD sing 91 n n C4B O4B FAD sing 92 n n C4B C3B FAD sing 93 n n C4B H4B FAD sing 94 n n O4B C1B FAD sing 95 n n C3B O3B FAD sing 96 n n C3B C2B FAD sing 97 n n C3B H3B FAD sing 98 n n O3B HO3A FAD sing 99 n n C2B O2B FAD sing 100 n n C2B C1B FAD sing 101 n n C2B H2B FAD sing 102 n n O2B HO2A FAD sing 103 n n C1B N9A FAD sing 104 n n C1B H1B FAD sing 105 n n N9A C8A FAD sing 106 n y N9A C4A FAD sing 107 n y C8A N7A FAD doub 108 n y C8A H8A FAD sing 109 n n N7A C5A FAD sing 110 n y C5A C6A FAD sing 111 n y C5A C4A FAD doub 112 n y C6A N6A FAD sing 113 n n C6A N1A FAD doub 114 n y N6A H61A FAD sing 115 n n N6A H62A FAD sing 116 n n N1A C2A FAD sing 117 n y C2A N3A FAD doub 118 n y C2A H2A FAD sing 119 n n N3A C4A FAD sing 120 n y N1 C2 FAD sing 121 n n N1 C10 FAD doub 122 n n C2 O2 FAD doub 123 n n C2 N3 FAD sing 124 n n N3 C4 FAD sing 125 n n N3 HN3 FAD sing 126 n n C4 O4 FAD doub 127 n n C4 C4X FAD sing 128 n n C4X N5 FAD doub 129 n n C4X C10 FAD sing 130 n n N5 C5X FAD sing 131 n n C5X C6 FAD doub 132 n y C5X C9A FAD sing 133 n y C6 C7 FAD sing 134 n y C6 H6 FAD sing 135 n n C7 C7M FAD sing 136 n n C7 C8 FAD doub 137 n y C7M HM71 FAD sing 138 n n C7M HM72 FAD sing 139 n n C7M HM73 FAD sing 140 n n C8 C8M FAD sing 141 n n C8 C9 FAD sing 142 n y C8M HM81 FAD sing 143 n n C8M HM82 FAD sing 144 n n C8M HM83 FAD sing 145 n n C9 C9A FAD doub 146 n y C9 H9 FAD sing 147 n n C9A N10 FAD sing 148 n n N10 C10 FAD sing 149 n n N10 C1' FAD sing 150 n n C1' C2' FAD sing 151 n n C1' "H1'1" FAD sing 152 n n C1' "H1'2" FAD sing 153 n n C2' O2' FAD sing 154 n n C2' C3' FAD sing 155 n n C2' H2' FAD sing 156 n n O2' HO2' FAD sing 157 n n C3' O3' FAD sing 158 n n C3' C4' FAD sing 159 n n C3' H3' FAD sing 160 n n O3' HO3' FAD sing 161 n n C4' O4' FAD sing 162 n n C4' C5' FAD sing 163 n n C4' H4' FAD sing 164 n n O4' HO4' FAD sing 165 n n C5' O5' FAD sing 166 n n C5' "H5'1" FAD sing 167 n n C5' "H5'2" FAD sing 168 n n O5' P FAD sing 169 n n P O1P FAD doub 170 n n P O2P FAD sing 171 n n P O3P FAD sing 172 n n O2P HOP2 FAD sing 173 n n # _atom_sites.entry_id 7CYX _atom_sites.fract_transf_matrix[1][1] 0.012168 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00753 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006053 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FAD A 1 401 2 FAD FAD . D 2 FAD B 1 401 1 FAD FAD . E 3 HOH A 1 501 42 HOH HOH . E 3 HOH A 2 502 33 HOH HOH . E 3 HOH A 3 503 62 HOH HOH . E 3 HOH A 4 504 27 HOH HOH . E 3 HOH A 5 505 5 HOH HOH . E 3 HOH A 6 506 63 HOH HOH . E 3 HOH A 7 507 59 HOH HOH . E 3 HOH A 8 508 56 HOH HOH . E 3 HOH A 9 509 6 HOH HOH . E 3 HOH A 10 510 24 HOH HOH . E 3 HOH A 11 511 57 HOH HOH . E 3 HOH A 12 512 60 HOH HOH . E 3 HOH A 13 513 4 HOH HOH . E 3 HOH A 14 514 61 HOH HOH . E 3 HOH A 15 515 29 HOH HOH . E 3 HOH A 16 516 8 HOH HOH . E 3 HOH A 17 517 12 HOH HOH . E 3 HOH A 18 518 65 HOH HOH . E 3 HOH A 19 519 3 HOH HOH . F 3 HOH B 1 501 17 HOH HOH . F 3 HOH B 2 502 28 HOH HOH . F 3 HOH B 3 503 66 HOH HOH . F 3 HOH B 4 504 21 HOH HOH . F 3 HOH B 5 505 67 HOH HOH . F 3 HOH B 6 506 64 HOH HOH . F 3 HOH B 7 507 16 HOH HOH . F 3 HOH B 8 508 23 HOH HOH . F 3 HOH B 9 509 7 HOH HOH . F 3 HOH B 10 510 25 HOH HOH . F 3 HOH B 11 511 52 HOH HOH . F 3 HOH B 12 512 26 HOH HOH . F 3 HOH B 13 513 2 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . C 2 39.406 16.88 28.262 1 38.69 ? PA FAD 401 A 1 HETATM 2 O O1A FAD . . . C 2 39.699 15.515 27.779 1 37.72 ? O1A FAD 401 A 1 HETATM 3 O O2A FAD . . . C 2 38.436 17.004 29.403 1 42.97 ? O2A FAD 401 A 1 HETATM 4 O O5B FAD . . . C 2 40.795 17.555 28.561 1 38.33 ? O5B FAD 401 A 1 HETATM 5 C C5B FAD . . . C 2 40.856 18.69 29.361 1 42.63 ? C5B FAD 401 A 1 HETATM 6 C C4B FAD . . . C 2 42.031 18.444 30.268 1 42.95 ? C4B FAD 401 A 1 HETATM 7 O O4B FAD . . . C 2 42.462 19.694 30.772 1 45.62 ? O4B FAD 401 A 1 HETATM 8 C C3B FAD . . . C 2 41.669 17.596 31.467 1 46.89 ? C3B FAD 401 A 1 HETATM 9 O O3B FAD . . . C 2 42.549 16.45 31.46 1 45.6 ? O3B FAD 401 A 1 HETATM 10 C C2B FAD . . . C 2 41.917 18.473 32.691 1 45.88 ? C2B FAD 401 A 1 HETATM 11 O O2B FAD . . . C 2 42.627 17.76 33.713 1 47.47 ? O2B FAD 401 A 1 HETATM 12 C C1B FAD . . . C 2 42.836 19.523 32.143 1 46.85 ? C1B FAD 401 A 1 HETATM 13 N N9A FAD . . . C 2 42.785 20.825 32.803 1 50.27 ? N9A FAD 401 A 1 HETATM 14 C C8A FAD . . . C 2 41.685 21.592 32.94 1 53.45 ? C8A FAD 401 A 1 HETATM 15 N N7A FAD . . . C 2 41.993 22.737 33.578 1 54.37 ? N7A FAD 401 A 1 HETATM 16 C C5A FAD . . . C 2 43.316 22.722 33.805 1 47.91 ? C5A FAD 401 A 1 HETATM 17 C C6A FAD . . . C 2 44.261 23.642 34.433 1 46.6 ? C6A FAD 401 A 1 HETATM 18 N N6A FAD . . . C 2 43.777 24.802 34.927 1 43.45 ? N6A FAD 401 A 1 HETATM 19 N N1A FAD . . . C 2 45.562 23.26 34.528 1 43.45 ? N1A FAD 401 A 1 HETATM 20 C C2A FAD . . . C 2 45.967 22.079 34.045 1 46.03 ? C2A FAD 401 A 1 HETATM 21 N N3A FAD . . . C 2 45.147 21.179 33.454 1 44.72 ? N3A FAD 401 A 1 HETATM 22 C C4A FAD . . . C 2 43.838 21.458 33.3 1 47.78 ? C4A FAD 401 A 1 HETATM 23 N N1 FAD . . . C 2 33.677 12.756 20.81 1 47.62 ? N1 FAD 401 A 1 HETATM 24 C C2 FAD . . . C 2 33.706 12.199 19.557 1 50.23 ? C2 FAD 401 A 1 HETATM 25 O O2 FAD . . . C 2 34.373 12.83 18.702 1 50.48 ? O2 FAD 401 A 1 HETATM 26 N N3 FAD . . . C 2 33.068 11.042 19.254 1 44.83 ? N3 FAD 401 A 1 HETATM 27 C C4 FAD . . . C 2 32.404 10.36 20.213 1 48.53 ? C4 FAD 401 A 1 HETATM 28 O O4 FAD . . . C 2 31.831 9.259 20.002 1 49.3 ? O4 FAD 401 A 1 HETATM 29 C C4X FAD . . . C 2 32.322 10.936 21.579 1 44.04 ? C4X FAD 401 A 1 HETATM 30 N N5 FAD . . . C 2 31.64 10.335 22.561 1 44.38 ? N5 FAD 401 A 1 HETATM 31 C C5X FAD . . . C 2 31.602 10.865 23.8 1 45.99 ? C5X FAD 401 A 1 HETATM 32 C C6 FAD . . . C 2 30.914 10.199 24.799 1 45.49 ? C6 FAD 401 A 1 HETATM 33 C C7 FAD . . . C 2 30.854 10.734 26.074 1 42.93 ? C7 FAD 401 A 1 HETATM 34 C C7M FAD . . . C 2 30.086 10.018 27.171 1 45.57 ? C7M FAD 401 A 1 HETATM 35 C C8 FAD . . . C 2 31.537 11.986 26.381 1 39.81 ? C8 FAD 401 A 1 HETATM 36 C C8M FAD . . . C 2 31.503 12.585 27.78 1 42.23 ? C8M FAD 401 A 1 HETATM 37 C C9 FAD . . . C 2 32.216 12.632 25.399 1 43.06 ? C9 FAD 401 A 1 HETATM 38 C C9A FAD . . . C 2 32.287 12.134 24.118 1 42.03 ? C9A FAD 401 A 1 HETATM 39 N N10 FAD . . . C 2 33.016 12.793 23.118 1 44.2 ? N10 FAD 401 A 1 HETATM 40 C C10 FAD . . . C 2 33.02 12.206 21.832 1 45.03 ? C10 FAD 401 A 1 HETATM 41 C C1' FAD . . . C 2 33.647 14.107 23.302 1 43.11 ? C1' FAD 401 A 1 HETATM 42 C C2' FAD . . . C 2 35.096 14.175 23.665 1 44.31 ? C2' FAD 401 A 1 HETATM 43 O O2' FAD . . . C 2 35.28 13.421 24.875 1 44.03 ? O2' FAD 401 A 1 HETATM 44 C C3' FAD . . . C 2 35.437 15.637 23.894 1 45.36 ? C3' FAD 401 A 1 HETATM 45 O O3' FAD . . . C 2 34.799 16.517 22.922 1 41.84 ? O3' FAD 401 A 1 HETATM 46 C C4' FAD . . . C 2 36.965 15.734 23.986 1 44.83 ? C4' FAD 401 A 1 HETATM 47 O O4' FAD . . . C 2 37.473 14.735 24.887 1 44.84 ? O4' FAD 401 A 1 HETATM 48 C C5' FAD . . . C 2 37.432 17.053 24.539 1 43.18 ? C5' FAD 401 A 1 HETATM 49 O O5' FAD . . . C 2 38.819 16.927 24.793 1 45.66 ? O5' FAD 401 A 1 HETATM 50 P P FAD . . . C 2 39.566 18.054 25.635 1 43.19 ? P FAD 401 A 1 HETATM 51 O O1P FAD . . . C 2 39.118 19.405 25.211 1 46.21 ? O1P FAD 401 A 1 HETATM 52 O O2P FAD . . . C 2 41.026 17.688 25.655 1 44.16 ? O2P FAD 401 A 1 HETATM 53 O O3P FAD . . . C 2 38.826 17.805 27.059 1 43.56 ? O3P FAD 401 A 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 53 #